RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 TTC5Q8N0Z6 440 aa22.45■■□□□ 1.18
CCNF-203ENST00000564236 PHACTR3Q96KR7 559 aa22.45■■□□□ 1.18
CCNF-203ENST00000564236 WWC3Q9ULE0 1092 aa22.45■■□□□ 1.18
CCNF-203ENST00000564236 N4BP2Q86UW6 1770 aaPredicted RBP22.45■■□□□ 1.18
CCNF-203ENST00000564236 BRCA1P38398 1863 aaKnown RBP22.45■■□□□ 1.18
CCNF-203ENST00000564236 STARD3NLO95772 234 aa22.44■■□□□ 1.18
CCNF-203ENST00000564236 PRKAR2BP31323 418 aa22.44■■□□□ 1.18
CCNF-203ENST00000564236 ZNF496Q96IT1 587 aaPredicted RBP22.44■■□□□ 1.18
CCNF-203ENST00000564236 TEX13AQ9BXU3 409 aaPredicted RBP22.44■■□□□ 1.18
CCNF-203ENST00000564236 HEG1Q9ULI3 1381 aa22.44■■□□□ 1.18
CCNF-203ENST00000564236 NUDCQ9Y266 331 aa22.44■■□□□ 1.18
CCNF-203ENST00000564236 EIF5P55010 431 aaKnown RBP22.43■■□□□ 1.18
CCNF-203ENST00000564236 BCL2L12Q9HB09 334 aa22.43■■□□□ 1.18
CCNF-203ENST00000564236 GPBP1L1Q9HC44 474 aaPredicted RBP22.43■■□□□ 1.18
CCNF-203ENST00000564236 BCS1LQ9Y276 419 aa22.43■■□□□ 1.18
CCNF-203ENST00000564236 FCHSD2O94868 740 aa22.42■■□□□ 1.18
CCNF-203ENST00000564236 CNGB1Q14028 1251 aaPredicted RBP22.42■■□□□ 1.18
CCNF-203ENST00000564236 NRXN2Q9P2S2 1712 aa22.42■■□□□ 1.18
CCNF-203ENST00000564236 NFIXQ14938 502 aa22.41■■□□□ 1.18
CCNF-203ENST00000564236 PIM2Q9P1W9 311 aa22.41■■□□□ 1.18
CCNF-203ENST00000564236 SENP3-EIF4A1A0A087X0R7 540 aa22.39■■□□□ 1.17
CCNF-203ENST00000564236 FMNL2Q96PY5 1086 aa22.39■■□□□ 1.17
CCNF-203ENST00000564236 A0A087WZG4 1122 aa22.38■■□□□ 1.17
CCNF-203ENST00000564236 ARFGEF1Q9Y6D6 1849 aa22.37■■□□□ 1.17
CCNF-203ENST00000564236 HTATSF1O43719 755 aaKnown RBP22.37■■□□□ 1.17
CCNF-203ENST00000564236 U2AF1L5P0DN76 240 aaPredicted RBP22.37■■□□□ 1.17
CCNF-203ENST00000564236 IL6STP40189 918 aaPredicted RBP22.37■■□□□ 1.17
CCNF-203ENST00000564236 U2AF1Q01081 240 aaKnown RBP eCLIP22.37■■□□□ 1.17
CCNF-203ENST00000564236 CANXP27824 592 aaKnown RBP22.36■■□□□ 1.17
CCNF-203ENST00000564236 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
CCNF-203ENST00000564236 BTBD11A6QL63 1104 aa22.35■■□□□ 1.17
CCNF-203ENST00000564236 ARHGAP27Q6ZUM4 889 aa22.35■■□□□ 1.17
CCNF-203ENST00000564236 SERPINB2P05120 415 aa22.34■■□□□ 1.17
CCNF-203ENST00000564236 CHRNA5P30532 468 aa22.34■■□□□ 1.17
CCNF-203ENST00000564236 SCN7AQ01118 1682 aa22.33■■□□□ 1.17
CCNF-203ENST00000564236 KIF3CO14782 793 aa22.33■■□□□ 1.17
CCNF-203ENST00000564236 KCNQ3O43525 872 aa22.32■■□□□ 1.16
CCNF-203ENST00000564236 ZNF526Q8TF50 670 aaPredicted RBP22.32■■□□□ 1.16
CCNF-203ENST00000564236 RTF1Q92541 710 aaKnown RBP22.32■■□□□ 1.16
CCNF-203ENST00000564236 AFDNP55196 1824 aaKnown RBP22.31■■□□□ 1.16
CCNF-203ENST00000564236 A1BGP04217 495 aa22.3■■□□□ 1.16
CCNF-203ENST00000564236 MCM10Q7L590 875 aa22.29■■□□□ 1.16
CCNF-203ENST00000564236 CARMIL3Q8ND23 1372 aa22.28■■□□□ 1.16
CCNF-203ENST00000564236 DLEC1Q9Y238 1755 aa22.28■■□□□ 1.16
CCNF-203ENST00000564236 RGL2O15211 777 aa22.28■■□□□ 1.16
CCNF-203ENST00000564236 CAMTA2O94983 1202 aa22.28■■□□□ 1.16
CCNF-203ENST00000564236 C9orf131Q5VYM1 1079 aa22.28■■□□□ 1.16
CCNF-203ENST00000564236 TBC1D9BQ66K14 1250 aa22.28■■□□□ 1.16
CCNF-203ENST00000564236 PDZRN3Q9UPQ7 1066 aa22.28■■□□□ 1.16
CCNF-203ENST00000564236 USP16Q9Y5T5 823 aa22.28■■□□□ 1.16
CCNF-203ENST00000564236 CEP350Q5VT06 3117 aa22.27■■□□□ 1.16
CCNF-203ENST00000564236 SNRPA1P09661 255 aaKnown RBP22.27■■□□□ 1.16
CCNF-203ENST00000564236 PLEKHF1Q96S99 279 aa22.27■■□□□ 1.16
CCNF-203ENST00000564236 BRIP1Q9BX63 1249 aa22.26■■□□□ 1.15
CCNF-203ENST00000564236 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
CCNF-203ENST00000564236 ZC3H4Q9UPT8 1303 aaKnown RBP22.26■■□□□ 1.15
CCNF-203ENST00000564236 HSPA6P17066 643 aa22.25■■□□□ 1.15
CCNF-203ENST00000564236 TAF7Q15545 349 aaPredicted RBP22.25■■□□□ 1.15
CCNF-203ENST00000564236 TTLL6Q8N841 843 aa22.25■■□□□ 1.15
CCNF-203ENST00000564236 H0YIN7 160 aa22.24■■□□□ 1.15
CCNF-203ENST00000564236 DCTN1Q14203 1278 aa22.24■■□□□ 1.15
CCNF-203ENST00000564236 PRR5LQ6MZQ0 368 aa22.24■■□□□ 1.15
CCNF-203ENST00000564236 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
CCNF-203ENST00000564236 BCORQ6W2J9 1755 aa22.23■■□□□ 1.15
CCNF-203ENST00000564236 PRAMEF22A3QJZ6 481 aa22.23■■□□□ 1.15
CCNF-203ENST00000564236 BICDL1Q6ZP65 573 aa22.23■■□□□ 1.15
CCNF-203ENST00000564236 DZIP3Q86Y13 1208 aaKnown RBP22.23■■□□□ 1.15
CCNF-203ENST00000564236 C2CD5Q86YS7 1000 aa22.23■■□□□ 1.15
CCNF-203ENST00000564236 TOMM70O94826 608 aa22.22■■□□□ 1.15
CCNF-203ENST00000564236 PDE6BP35913 854 aa22.22■■□□□ 1.15
CCNF-203ENST00000564236 NPM2Q86SE8 214 aaKnown RBP22.22■■□□□ 1.15
CCNF-203ENST00000564236 SETDB2Q96T68 719 aa22.22■■□□□ 1.15
CCNF-203ENST00000564236 PNISRQ8TF01 805 aaKnown RBP22.21■■□□□ 1.15
CCNF-203ENST00000564236 RNF181Q9P0P0 153 aa22.21■■□□□ 1.15
CCNF-203ENST00000564236 ZNF330Q9Y3S2 320 aaPredicted RBP22.21■■□□□ 1.15
CCNF-203ENST00000564236 NBPF26B4DH59 902 aa22.2■■□□□ 1.14
CCNF-203ENST00000564236 NEFMP07197 916 aa22.2■■□□□ 1.14
CCNF-203ENST00000564236 NBPF10Q6P3W6 841 aaKnown RBP22.2■■□□□ 1.14
CCNF-203ENST00000564236 NBPF15Q8N660 670 aa22.2■■□□□ 1.14
CCNF-203ENST00000564236 PNNQ9H307 717 aaKnown RBP22.2■■□□□ 1.14
CCNF-203ENST00000564236 NMRK2Q9NPI5 230 aa22.2■■□□□ 1.14
CCNF-203ENST00000564236 ANKRD31Q8N7Z5 1873 aa22.2■■□□□ 1.14
CCNF-203ENST00000564236 NFE2L2Q16236 605 aa22.19■■□□□ 1.14
CCNF-203ENST00000564236 KDM2BQ8NHM5 1336 aa22.18■■□□□ 1.14
CCNF-203ENST00000564236 LMNB1P20700 586 aa22.18■■□□□ 1.14
CCNF-203ENST00000564236 RALBP1Q15311 655 aa22.18■■□□□ 1.14
CCNF-203ENST00000564236 CNBD1Q8NA66 436 aa22.18■■□□□ 1.14
CCNF-203ENST00000564236 ZNF652Q9Y2D9 606 aa22.18■■□□□ 1.14
CCNF-203ENST00000564236 PRELPP51888 382 aa22.17■■□□□ 1.14
CCNF-203ENST00000564236 SBF1O95248 1867 aa22.17■■□□□ 1.14
CCNF-203ENST00000564236 NFKBIEO00221 500 aa22.16■■□□□ 1.14
CCNF-203ENST00000564236 PIP4K2AP48426 406 aaPredicted RBP22.16■■□□□ 1.14
CCNF-203ENST00000564236 RASSF7Q02833 373 aa22.16■■□□□ 1.14
CCNF-203ENST00000564236 RBM46Q8TBY0 533 aaKnown RBP22.16■■□□□ 1.14
CCNF-203ENST00000564236 KDM3BQ7LBC6 1761 aa22.16■■□□□ 1.14
CCNF-203ENST00000564236 COL11A2P13942 1736 aaPredicted RBP22.15■■□□□ 1.14
CCNF-203ENST00000564236 KLRG2A4D1S0 409 aaPredicted RBP22.15■■□□□ 1.14
CCNF-203ENST00000564236 ST5P78524 1137 aa22.15■■□□□ 1.14
CCNF-203ENST00000564236 STYK1Q6J9G0 422 aa22.15■■□□□ 1.14
CCNF-203ENST00000564236 LAMB4A4D0S4 1761 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms