RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 DIP2AQ14689 1571 aa8.73□□□□□ -1.01
TCF4-220ENST00000563824 CHD2O14647 1828 aaKnown RBP8.73□□□□□ -1.01
TCF4-220ENST00000563824 MROH1Q8NDA8 1641 aa8.72□□□□□ -1.01
TCF4-220ENST00000563824 TLL1O43897 1013 aa8.72□□□□□ -1.01
TCF4-220ENST00000563824 ATG7O95352 703 aa8.72□□□□□ -1.01
TCF4-220ENST00000563824 SKIP12755 728 aa8.72□□□□□ -1.01
TCF4-220ENST00000563824 SRPK2P78362 688 aaKnown RBP8.72□□□□□ -1.01
TCF4-220ENST00000563824 KCNH2Q12809 1159 aa8.72□□□□□ -1.01
TCF4-220ENST00000563824 TMCO4Q5TGY1 634 aa8.72□□□□□ -1.01
TCF4-220ENST00000563824 GPKOWQ92917 476 aaPredicted RBP eCLIP8.72□□□□□ -1.01
TCF4-220ENST00000563824 VRTNQ9H8Y1 702 aa8.72□□□□□ -1.01
TCF4-220ENST00000563824 ZNF644Q9H582 1327 aaPredicted RBP8.72□□□□□ -1.01
TCF4-220ENST00000563824 ARHGEF5Q12774 1597 aa8.71□□□□□ -1.02
TCF4-220ENST00000563824 BRD1O95696 1058 aa8.71□□□□□ -1.02
TCF4-220ENST00000563824 SLFNL1Q499Z3 407 aa8.71□□□□□ -1.02
TCF4-220ENST00000563824 NPM2Q86SE8 214 aaKnown RBP8.71□□□□□ -1.02
TCF4-220ENST00000563824 SLC26A8Q96RN1 970 aa8.71□□□□□ -1.02
TCF4-220ENST00000563824 GZF1Q9H116 711 aaPredicted RBP8.71□□□□□ -1.02
TCF4-220ENST00000563824 TRPC5Q9UL62 973 aaPredicted RBP8.71□□□□□ -1.02
TCF4-220ENST00000563824 GPSM3Q9Y4H4 160 aa8.71□□□□□ -1.02
TCF4-220ENST00000563824 PCDHB9Q9Y5E1 797 aa8.71□□□□□ -1.02
TCF4-220ENST00000563824 PIK3C2BO00750 1634 aa8.71□□□□□ -1.02
TCF4-220ENST00000563824 USP17L3A6NCW0 530 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 USP17L4A6NCW7 530 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 PIK3CDO00329 1044 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 ADH1BP00325 375 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 MMP16P51512 607 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 KCNA1Q09470 495 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 USP17L2Q6R6M4 530 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 USP17L1Q7RTZ2 530 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 CCDC24Q8N4L8 307 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
TCF4-220ENST00000563824 C8orf37Q96NL8 207 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 EVA1BQ9NVM1 165 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 DCCP43146 1447 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 CEP162Q5TB80 1403 aa8.7□□□□□ -1.02
TCF4-220ENST00000563824 CARNS1A5YM72 827 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 USP17L5A8MUK1 530 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 NYAP1Q6ZVC0 841 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 NFATC2IPQ8NCF5 419 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 PIK3R4Q99570 1358 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 MAST1Q9Y2H9 1570 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 NHSL1Q5SYE7 1610 aa8.69□□□□□ -1.02
TCF4-220ENST00000563824 CEP152O94986 1710 aa8.68□□□□□ -1.02
TCF4-220ENST00000563824 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.68□□□□□ -1.02
TCF4-220ENST00000563824 ZPR1O75312 459 aa8.68□□□□□ -1.02
TCF4-220ENST00000563824 BRINP3Q76B58 766 aa8.68□□□□□ -1.02
TCF4-220ENST00000563824 RNF135Q8IUD6 432 aa8.68□□□□□ -1.02
TCF4-220ENST00000563824 ARHGAP9Q9BRR9 750 aa8.68□□□□□ -1.02
TCF4-220ENST00000563824 SLC52A1Q9NWF4 448 aa8.68□□□□□ -1.02
TCF4-220ENST00000563824 PLEKHG1Q9ULL1 1385 aa8.68□□□□□ -1.02
TCF4-220ENST00000563824 BLMP54132 1417 aaPredicted RBP8.68□□□□□ -1.02
TCF4-220ENST00000563824 EHBP1L1Q8N3D4 1523 aa8.68□□□□□ -1.02
TCF4-220ENST00000563824 ITGBL1O95965 494 aaPredicted RBP8.67□□□□□ -1.02
TCF4-220ENST00000563824 MCCD1P59942 119 aaPredicted RBP8.67□□□□□ -1.02
TCF4-220ENST00000563824 ZBTB33Q86T24 672 aa8.67□□□□□ -1.02
TCF4-220ENST00000563824 DEPDC4Q8N2C3 294 aa8.67□□□□□ -1.02
TCF4-220ENST00000563824 LCE2BO14633 110 aa8.66□□□□□ -1.02
TCF4-220ENST00000563824 SF3B2Q13435 895 aaKnown RBP8.66□□□□□ -1.02
TCF4-220ENST00000563824 IDI1Q13907 227 aa8.66□□□□□ -1.02
TCF4-220ENST00000563824 B4GALNT3Q6L9W6 998 aa8.66□□□□□ -1.02
TCF4-220ENST00000563824 PLEKHM2Q8IWE5 1019 aa8.66□□□□□ -1.02
TCF4-220ENST00000563824 MTRQ99707 1265 aa8.66□□□□□ -1.02
TCF4-220ENST00000563824 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
TCF4-220ENST00000563824 USP21Q9UK80 565 aa8.66□□□□□ -1.02
TCF4-220ENST00000563824 DUOX2Q9NRD8 1548 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 PTCH1Q13635 1447 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 KANK1Q14678 1352 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 PNPLA6Q8IY17 1366 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 FAM174AQ8TBP5 190 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 ADAM32Q8TC27 787 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 CARD14Q9BXL6 1004 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 CEP126Q9P2H0 1117 aa8.65□□□□□ -1.02
TCF4-220ENST00000563824 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.02
TCF4-220ENST00000563824 ADGRB3O60242 1522 aa8.64□□□□□ -1.03
TCF4-220ENST00000563824 ASXL1Q8IXJ9 1541 aa8.64□□□□□ -1.03
TCF4-220ENST00000563824 ATRNO75882 1429 aa8.64□□□□□ -1.03
TCF4-220ENST00000563824 MAGEB6P1A0A0J9YX57 407 aa8.64□□□□□ -1.03
TCF4-220ENST00000563824 TMEM88BA6NKF7 163 aa8.64□□□□□ -1.03
TCF4-220ENST00000563824 YY1P25490 414 aa8.64□□□□□ -1.03
TCF4-220ENST00000563824 NCOA4Q13772 614 aa8.64□□□□□ -1.03
TCF4-220ENST00000563824 KANK4Q5T7N3 995 aaPredicted RBP8.64□□□□□ -1.03
TCF4-220ENST00000563824 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.64□□□□□ -1.03
TCF4-220ENST00000563824 USP17L15C9J2P7 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L10C9JJH3 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L13C9JLJ4 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L11C9JVI0 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L21D6R901 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L18D6R9N7 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L22D6RA61 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L17D6RBQ6 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L19D6RCP7 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L20D6RJB6 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 USP17L24Q0WX57 530 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 AGERQ15109 404 aa8.63□□□□□ -1.03
TCF4-220ENST00000563824 LARP1Q6PKG0 1096 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms