RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PAPPAQ13219 1627 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 RNMTO43148 476 aaKnown RBP8.23□□□□□ -1.09
CNOT1-204ENST00000563130 IL17REQ8NFR9 667 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 CEMIPQ8WUJ3 1361 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 PALLDQ8WX93 1383 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 MAP3K5Q99683 1374 aa8.23□□□□□ -1.09
CNOT1-204ENST00000563130 GNAT3A8MTJ3 354 aa8.22□□□□□ -1.09
CNOT1-204ENST00000563130 CABP4P57796 275 aa8.22□□□□□ -1.09
CNOT1-204ENST00000563130 CCDC184Q52MB2 194 aa8.22□□□□□ -1.09
CNOT1-204ENST00000563130 NFATC2IPQ8NCF5 419 aa8.22□□□□□ -1.09
CNOT1-204ENST00000563130 SMARCC1Q92922 1105 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-204ENST00000563130 SLC52A2Q9HAB3 445 aa8.22□□□□□ -1.09
CNOT1-204ENST00000563130 ANO8Q9HCE9 1232 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-204ENST00000563130 ATG3Q9NT62 314 aa8.22□□□□□ -1.09
CNOT1-204ENST00000563130 ASAP1Q9ULH1 1129 aa8.22□□□□□ -1.09
CNOT1-204ENST00000563130 PNNQ9H307 717 aaKnown RBP8.22□□□□□ -1.09
CNOT1-204ENST00000563130 ADAMTS8Q9UP79 889 aa8.22□□□□□ -1.09
CNOT1-204ENST00000563130 PLCB2Q00722 1185 aa8.21□□□□□ -1.1
CNOT1-204ENST00000563130 NBPF14Q5TI25 921 aa8.21□□□□□ -1.1
CNOT1-204ENST00000563130 HTATSF1O43719 755 aaKnown RBP8.2□□□□□ -1.1
CNOT1-204ENST00000563130 CCNL1Q9UK58 526 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-204ENST00000563130 LOC102724428A0A0B4J2F2 783 aa8.2□□□□□ -1.1
CNOT1-204ENST00000563130 KCNQ4P56696 695 aa8.2□□□□□ -1.1
CNOT1-204ENST00000563130 SIK1P57059 783 aa8.2□□□□□ -1.1
CNOT1-204ENST00000563130 R3HDM1Q15032 1099 aaKnown RBP8.2□□□□□ -1.1
CNOT1-204ENST00000563130 WDR43Q15061 677 aaKnown RBP eCLIP8.2□□□□□ -1.1
CNOT1-204ENST00000563130 NFE2L2Q16236 605 aa8.2□□□□□ -1.1
CNOT1-204ENST00000563130 SLC15A2Q16348 729 aa8.2□□□□□ -1.1
CNOT1-204ENST00000563130 SLC4A9Q96Q91 983 aa8.2□□□□□ -1.1
CNOT1-204ENST00000563130 NEFMP07197 916 aa8.19□□□□□ -1.1
CNOT1-204ENST00000563130 PNISRQ8TF01 805 aaKnown RBP8.19□□□□□ -1.1
CNOT1-204ENST00000563130 METRNQ9UJH8 293 aa8.19□□□□□ -1.1
CNOT1-204ENST00000563130 VIRMAQ69YN4 1812 aaKnown RBP8.19□□□□□ -1.1
CNOT1-204ENST00000563130 ZNF831Q5JPB2 1677 aa8.19□□□□□ -1.1
CNOT1-204ENST00000563130 PSDA5PKW4 1024 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-204ENST00000563130 ZNF827Q17R98 1081 aa8.19□□□□□ -1.1
CNOT1-204ENST00000563130 EFCAB3Q8N7B9 438 aa8.19□□□□□ -1.1
CNOT1-204ENST00000563130 MAPK8IP3Q9UPT6 1336 aa8.19□□□□□ -1.1
CNOT1-204ENST00000563130 HMGB2P26583 209 aaKnown RBP8.18□□□□□ -1.1
CNOT1-204ENST00000563130 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 SIPA1L3O60292 1781 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-204ENST00000563130 SEC24BO95487 1268 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 TMPOP42166 694 aaKnown RBP8.18□□□□□ -1.1
CNOT1-204ENST00000563130 TEFQ10587 303 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 ITPK1Q13572 414 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 DCTN1Q14203 1278 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 MCM10Q7L590 875 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 CCDC146Q8IYE0 955 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 RTF1Q92541 710 aaKnown RBP8.18□□□□□ -1.1
CNOT1-204ENST00000563130 MRS2Q9HD23 443 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 STK32BQ9NY57 414 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 TAF1LQ8IZX4 1826 aa8.18□□□□□ -1.1
CNOT1-204ENST00000563130 CICQ96RK0 1608 aaPredicted RBP8.17□□□□□ -1.1
CNOT1-204ENST00000563130 KCPQ6ZWJ8 1503 aa8.17□□□□□ -1.1
CNOT1-204ENST00000563130 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
CNOT1-204ENST00000563130 SLC39A6Q13433 755 aa8.17□□□□□ -1.1
CNOT1-204ENST00000563130 DLG5Q8TDM6 1919 aa8.17□□□□□ -1.1
CNOT1-204ENST00000563130 C5P01031 1676 aa8.17□□□□□ -1.1
CNOT1-204ENST00000563130 RIPK4P57078 832 aa8.17□□□□□ -1.1
CNOT1-204ENST00000563130 ZNF790Q6PG37 636 aa8.17□□□□□ -1.1
CNOT1-204ENST00000563130 LINC00116Q8NCU8 138 aa8.17□□□□□ -1.1
CNOT1-204ENST00000563130 PDGFDQ9GZP0 370 aaPredicted RBP8.17□□□□□ -1.1
CNOT1-204ENST00000563130 SRCAPQ6ZRS2 3230 aa8.16□□□□□ -1.1
CNOT1-204ENST00000563130 C4BP0C0L5 1744 aa8.16□□□□□ -1.1
CNOT1-204ENST00000563130 CASZ1Q86V15 1759 aa8.16□□□□□ -1.1
CNOT1-204ENST00000563130 UBR2Q8IWV8 1755 aa8.16□□□□□ -1.1
CNOT1-204ENST00000563130 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
CNOT1-204ENST00000563130 PLCG2P16885 1265 aa8.16□□□□□ -1.1
CNOT1-204ENST00000563130 VSIG10Q8N0Z9 540 aa8.16□□□□□ -1.1
CNOT1-204ENST00000563130 QSER1Q2KHR3 1735 aa8.16□□□□□ -1.1
CNOT1-204ENST00000563130 IRX5P78411 483 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-204ENST00000563130 ARXQ96QS3 562 aa8.15□□□□□ -1.1
CNOT1-204ENST00000563130 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
CNOT1-204ENST00000563130 PNPLA7Q6ZV29 1317 aa8.15□□□□□ -1.1
CNOT1-204ENST00000563130 BTBD11A6QL63 1104 aa8.15□□□□□ -1.1
CNOT1-204ENST00000563130 TAF7Q15545 349 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-204ENST00000563130 AMIGO3Q86WK7 504 aa8.15□□□□□ -1.1
CNOT1-204ENST00000563130 ZNF496Q96IT1 587 aaPredicted RBP8.15□□□□□ -1.1
CNOT1-204ENST00000563130 THUMPD2Q9BTF0 503 aaKnown RBP8.15□□□□□ -1.1
CNOT1-204ENST00000563130 RRP7AQ9Y3A4 280 aaKnown RBP8.15□□□□□ -1.1
CNOT1-204ENST00000563130 COL5A3P25940 1745 aaPredicted RBP8.15□□□□□ -1.11
CNOT1-204ENST00000563130 TJP1Q07157 1748 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 CNTNAP4Q9C0A0 1308 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 APAF1O14727 1248 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 KCNQ3O43525 872 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 LMOD3Q0VAK6 560 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 RC3H1Q5TC82 1133 aaKnown RBP8.14□□□□□ -1.11
CNOT1-204ENST00000563130 TFCP2L1Q9NZI6 479 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 TUBGCP6Q96RT7 1819 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 HEG1Q9ULI3 1381 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 DNAJC10Q8IXB1 793 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 TTC5Q8N0Z6 440 aa8.14□□□□□ -1.11
CNOT1-204ENST00000563130 CCER2I3L3R5 266 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 NEUROD2Q15784 382 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 UBR3Q6ZT12 1888 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 CYP19A1P11511 503 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-204ENST00000563130 SSFA2P28290 1259 aa8.13□□□□□ -1.11
CNOT1-204ENST00000563130 DIEXFQ68CQ4 756 aaKnown RBP8.13□□□□□ -1.11
CNOT1-204ENST00000563130 COL23A1Q86Y22 540 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-204ENST00000563130 FLAD1Q8NFF5 587 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms