RNA–Protein interactions for RNA: ENST00000563028.1

KIFC3-213, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-213ENST00000563028 GRIN3BO60391 1043 aa31.09■■■□□ 2.57
KIFC3-213ENST00000563028 ZPR1O75312 459 aa31.09■■■□□ 2.57
KIFC3-213ENST00000563028 CANXP27824 592 aaKnown RBP31.09■■■□□ 2.57
KIFC3-213ENST00000563028 TEX13AQ9BXU3 409 aaPredicted RBP31.09■■■□□ 2.57
KIFC3-213ENST00000563028 USPL1Q5W0Q7 1092 aa31.08■■■□□ 2.57
KIFC3-213ENST00000563028 PNNQ9H307 717 aaKnown RBP31.08■■■□□ 2.57
KIFC3-213ENST00000563028 COL15A1P39059 1388 aa31.07■■■□□ 2.56
KIFC3-213ENST00000563028 MYBBP1AQ9BQG0 1328 aaKnown RBP31.07■■■□□ 2.56
KIFC3-213ENST00000563028 CHD4Q14839 1912 aa31.07■■■□□ 2.56
KIFC3-213ENST00000563028 ZEB1P37275 1124 aaPredicted RBP31.06■■■□□ 2.56
KIFC3-213ENST00000563028 NARFQ9UHQ1 456 aa31.05■■■□□ 2.56
KIFC3-213ENST00000563028 WWC3Q9ULE0 1092 aa31.05■■■□□ 2.56
KIFC3-213ENST00000563028 MAPK8IP3Q9UPT6 1336 aa31.04■■■□□ 2.56
KIFC3-213ENST00000563028 NFE2L2Q16236 605 aa31.03■■■□□ 2.56
KIFC3-213ENST00000563028 C10orf71Q711Q0 1435 aa31.03■■■□□ 2.56
KIFC3-213ENST00000563028 EIF5P55010 431 aaKnown RBP31.02■■■□□ 2.56
KIFC3-213ENST00000563028 TGFB2P61812 414 aa31.02■■■□□ 2.56
KIFC3-213ENST00000563028 DDR1Q08345 913 aa31.02■■■□□ 2.56
KIFC3-213ENST00000563028 KIF13BQ9NQT8 1826 aa31.01■■■□□ 2.56
KIFC3-213ENST00000563028 TM4SF1P30408 202 aa31.01■■■□□ 2.55
KIFC3-213ENST00000563028 TAF7Q15545 349 aaPredicted RBP31.01■■■□□ 2.55
KIFC3-213ENST00000563028 PXDNLA1KZ92 1463 aa31■■■□□ 2.55
KIFC3-213ENST00000563028 DLG5Q8TDM6 1919 aa30.99■■■□□ 2.55
KIFC3-213ENST00000563028 A0A087WZG4 1122 aa30.99■■■□□ 2.55
KIFC3-213ENST00000563028 A1BGP04217 495 aa30.99■■■□□ 2.55
KIFC3-213ENST00000563028 POLRMTO00411 1230 aaKnown RBP30.98■■■□□ 2.55
KIFC3-213ENST00000563028 ZNF784Q8NCA9 323 aaPredicted RBP30.98■■■□□ 2.55
KIFC3-213ENST00000563028 BCL2L12Q9HB09 334 aa30.98■■■□□ 2.55
KIFC3-213ENST00000563028 ZNF330Q9Y3S2 320 aaPredicted RBP30.98■■■□□ 2.55
KIFC3-213ENST00000563028 USP16Q9Y5T5 823 aa30.98■■■□□ 2.55
KIFC3-213ENST00000563028 A0A0G2JLW4 131 aa30.97■■■□□ 2.55
KIFC3-213ENST00000563028 IL6STP40189 918 aaPredicted RBP30.97■■■□□ 2.55
KIFC3-213ENST00000563028 MIS18AQ9NYP9 233 aa30.97■■■□□ 2.55
KIFC3-213ENST00000563028 PRAMEF22A3QJZ6 481 aa30.96■■■□□ 2.55
KIFC3-213ENST00000563028 SNRPA1P09661 255 aaKnown RBP30.96■■■□□ 2.55
KIFC3-213ENST00000563028 NFIXQ14938 502 aa30.96■■■□□ 2.55
KIFC3-213ENST00000563028 THUMPD2Q9BTF0 503 aaKnown RBP30.95■■■□□ 2.55
KIFC3-213ENST00000563028 KIAA1551Q9HCM1 1747 aa30.95■■■□□ 2.54
KIFC3-213ENST00000563028 DPEP1P16444 411 aa30.94■■■□□ 2.54
KIFC3-213ENST00000563028 PNISRQ8TF01 805 aaKnown RBP30.94■■■□□ 2.54
KIFC3-213ENST00000563028 PRKRIP1Q9H875 184 aaPredicted RBP30.94■■■□□ 2.54
KIFC3-213ENST00000563028 N4BP2Q86UW6 1770 aaPredicted RBP30.94■■■□□ 2.54
KIFC3-213ENST00000563028 NPM2Q86SE8 214 aaKnown RBP30.93■■■□□ 2.54
KIFC3-213ENST00000563028 TBC1D2BQ9UPU7 963 aa30.93■■■□□ 2.54
KIFC3-213ENST00000563028 PIP4K2AP48426 406 aaPredicted RBP30.9■■■□□ 2.54
KIFC3-213ENST00000563028 RIPK4P57078 832 aa30.9■■■□□ 2.54
KIFC3-213ENST00000563028 WDR43Q15061 677 aaKnown RBP eCLIP30.89■■■□□ 2.54
KIFC3-213ENST00000563028 BICDL1Q6ZP65 573 aa30.89■■■□□ 2.54
KIFC3-213ENST00000563028 BCS1LQ9Y276 419 aa30.89■■■□□ 2.54
KIFC3-213ENST00000563028 SERPINB2P05120 415 aa30.88■■■□□ 2.53
KIFC3-213ENST00000563028 CCDC146Q8IYE0 955 aa30.88■■■□□ 2.53
KIFC3-213ENST00000563028 KCNA3P22001 575 aa30.87■■■□□ 2.53
KIFC3-213ENST00000563028 TMPOP42166 694 aaKnown RBP30.87■■■□□ 2.53
KIFC3-213ENST00000563028 TBC1D9BQ66K14 1250 aa30.86■■■□□ 2.53
KIFC3-213ENST00000563028 DZIP3Q86Y13 1208 aaKnown RBP30.85■■■□□ 2.53
KIFC3-213ENST00000563028 KDM3BQ7LBC6 1761 aa30.84■■■□□ 2.53
KIFC3-213ENST00000563028 SCN7AQ01118 1682 aa30.84■■■□□ 2.53
KIFC3-213ENST00000563028 CAMTA2O94983 1202 aa30.84■■■□□ 2.53
KIFC3-213ENST00000563028 PIM2Q9P1W9 311 aa30.84■■■□□ 2.53
KIFC3-213ENST00000563028 AFDNP55196 1824 aaKnown RBP30.84■■■□□ 2.53
KIFC3-213ENST00000563028 NBPF26B4DH59 902 aa30.83■■■□□ 2.53
KIFC3-213ENST00000563028 CHRNA5P30532 468 aa30.83■■■□□ 2.53
KIFC3-213ENST00000563028 EIF4A1P60842 406 aaKnown RBP30.83■■■□□ 2.53
KIFC3-213ENST00000563028 LMOD3Q0VAK6 560 aa30.83■■■□□ 2.53
KIFC3-213ENST00000563028 NBPF10Q6P3W6 841 aaKnown RBP30.83■■■□□ 2.53
KIFC3-213ENST00000563028 NBPF15Q8N660 670 aa30.83■■■□□ 2.53
KIFC3-213ENST00000563028 ADAMTS8Q9UP79 889 aa30.83■■■□□ 2.53
KIFC3-213ENST00000563028 RRP7AQ9Y3A4 280 aaKnown RBP30.83■■■□□ 2.53
KIFC3-213ENST00000563028 NRXN2Q9P2S2 1712 aa30.82■■■□□ 2.52
KIFC3-213ENST00000563028 RUNDC1Q96C34 613 aa30.82■■■□□ 2.52
KIFC3-213ENST00000563028 BRCA1P38398 1863 aaKnown RBP30.81■■■□□ 2.52
KIFC3-213ENST00000563028 GIGYF1O75420 1035 aaPredicted RBP30.81■■■□□ 2.52
KIFC3-213ENST00000563028 NEUROD2Q15784 382 aa30.8■■■□□ 2.52
KIFC3-213ENST00000563028 DALRD3Q5D0E6 543 aaKnown RBP30.79■■■□□ 2.52
KIFC3-213ENST00000563028 TSPYL4Q9UJ04 414 aa30.79■■■□□ 2.52
KIFC3-213ENST00000563028 LAMB4A4D0S4 1761 aa30.77■■■□□ 2.52
KIFC3-213ENST00000563028 ARHGAP27Q6ZUM4 889 aa30.77■■■□□ 2.52
KIFC3-213ENST00000563028 SETDB2Q96T68 719 aa30.77■■■□□ 2.52
KIFC3-213ENST00000563028 CARMIL3Q8ND23 1372 aa30.77■■■□□ 2.52
KIFC3-213ENST00000563028 BCORQ6W2J9 1755 aa30.76■■■□□ 2.51
KIFC3-213ENST00000563028 ZNF316A6NFI3 1004 aaPredicted RBP30.74■■■□□ 2.51
KIFC3-213ENST00000563028 CLEC4GQ6UXB4 293 aa30.74■■■□□ 2.51
KIFC3-213ENST00000563028 BABAM1Q9NWV8 329 aa30.74■■■□□ 2.51
KIFC3-213ENST00000563028 ZNF652Q9Y2D9 606 aa30.74■■■□□ 2.51
KIFC3-213ENST00000563028 ATP10DQ9P241 1426 aa30.73■■■□□ 2.51
KIFC3-213ENST00000563028 PRR5LQ6MZQ0 368 aa30.73■■■□□ 2.51
KIFC3-213ENST00000563028 C2CD5Q86YS7 1000 aa30.73■■■□□ 2.51
KIFC3-213ENST00000563028 ADCY9O60503 1353 aa30.73■■■□□ 2.51
KIFC3-213ENST00000563028 TRIM35Q9UPQ4 493 aa30.72■■■□□ 2.51
KIFC3-213ENST00000563028 CCDC24Q8N4L8 307 aa30.71■■■□□ 2.51
KIFC3-213ENST00000563028 NGEFQ8N5V2 710 aa30.71■■■□□ 2.51
KIFC3-213ENST00000563028 ARFGEF1Q9Y6D6 1849 aa30.7■■■□□ 2.51
KIFC3-213ENST00000563028 H0YIN7 160 aa30.7■■■□□ 2.51
KIFC3-213ENST00000563028 NPHP1O15259 732 aa30.7■■■□□ 2.51
KIFC3-213ENST00000563028 BRIP1Q9BX63 1249 aa30.7■■■□□ 2.51
KIFC3-213ENST00000563028 RGL2O15211 777 aa30.69■■■□□ 2.5
KIFC3-213ENST00000563028 CNBD1Q8NA66 436 aa30.69■■■□□ 2.5
KIFC3-213ENST00000563028 MYL6BP14649 208 aa30.68■■■□□ 2.5
KIFC3-213ENST00000563028 PDE6BP35913 854 aa30.68■■■□□ 2.5
KIFC3-213ENST00000563028 HLFQ16534 295 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 269 ms