RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SPATA31C1P0DKV0 1188 aa7.7□□□□□ -1.18
HDGFL3-202ENST00000562702 NBPF1Q3BBV0 1214 aa7.7□□□□□ -1.18
HDGFL3-202ENST00000562702 ARSJQ5FYB0 599 aaPredicted RBP7.7□□□□□ -1.18
HDGFL3-202ENST00000562702 FAM182BQ5T319 152 aa7.7□□□□□ -1.18
HDGFL3-202ENST00000562702 GJA3Q9Y6H8 435 aa7.7□□□□□ -1.18
HDGFL3-202ENST00000562702 TATP17735 454 aaPredicted RBP7.69□□□□□ -1.18
HDGFL3-202ENST00000562702 ETNK1Q9HBU6 452 aa7.69□□□□□ -1.18
HDGFL3-202ENST00000562702 SCO2A0A1W2PP80 73 aa7.68□□□□□ -1.18
HDGFL3-202ENST00000562702 DCDC2BA2VCK2 349 aa7.67□□□□□ -1.18
HDGFL3-202ENST00000562702 KHNYNO15037 678 aaKnown RBP7.67□□□□□ -1.18
HDGFL3-202ENST00000562702 MAPTP10636 758 aaKnown RBP7.67□□□□□ -1.18
HDGFL3-202ENST00000562702 ALAS2P22557 587 aa7.67□□□□□ -1.18
HDGFL3-202ENST00000562702 OXLD1Q5BKU9 147 aa7.67□□□□□ -1.18
HDGFL3-202ENST00000562702 PRRT3Q5FWE3 981 aa7.67□□□□□ -1.18
HDGFL3-202ENST00000562702 A0A1W2PNR3 127 aa7.66□□□□□ -1.18
HDGFL3-202ENST00000562702 APBA3O96018 575 aa7.66□□□□□ -1.18
HDGFL3-202ENST00000562702 CD33P20138 364 aa7.66□□□□□ -1.18
HDGFL3-202ENST00000562702 TNP2Q05952 138 aa7.66□□□□□ -1.18
HDGFL3-202ENST00000562702 IL27Q8NEV9 243 aa7.66□□□□□ -1.18
HDGFL3-202ENST00000562702 PLVAPQ9BX97 442 aa7.66□□□□□ -1.18
HDGFL3-202ENST00000562702 DNAAF2Q9NVR5 837 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-202ENST00000562702 INHAP05111 366 aa7.65□□□□□ -1.18
HDGFL3-202ENST00000562702 ATP4AP20648 1035 aa7.65□□□□□ -1.18
HDGFL3-202ENST00000562702 GDF10P55107 478 aa7.65□□□□□ -1.18
HDGFL3-202ENST00000562702 ZNF468Q5VIY5 522 aaPredicted RBP7.65□□□□□ -1.18
HDGFL3-202ENST00000562702 MTMR14Q8NCE2 650 aa7.65□□□□□ -1.18
HDGFL3-202ENST00000562702 NEUROD2Q15784 382 aa7.64□□□□□ -1.19
HDGFL3-202ENST00000562702 FCHSD1Q86WN1 690 aa7.64□□□□□ -1.19
HDGFL3-202ENST00000562702 ZDHHC3Q9NYG2 299 aa7.64□□□□□ -1.19
HDGFL3-202ENST00000562702 MARK1Q9P0L2 795 aa7.64□□□□□ -1.19
HDGFL3-202ENST00000562702 FAM157BP0CG42 384 aa7.63□□□□□ -1.19
HDGFL3-202ENST00000562702 SMTNP53814 917 aa7.63□□□□□ -1.19
HDGFL3-202ENST00000562702 PCBP4P57723 403 aaKnown RBP7.63□□□□□ -1.19
HDGFL3-202ENST00000562702 TRIM11Q96F44 468 aa7.63□□□□□ -1.19
HDGFL3-202ENST00000562702 NACC1Q96RE7 527 aa7.63□□□□□ -1.19
HDGFL3-202ENST00000562702 ELOA3CA0A087WX78 387 aaPredicted RBP7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 ELOA3DA6NLF2 546 aaPredicted RBP7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 GPR37L1O60883 481 aa7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 LAMC2Q13753 1193 aa7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 MAP7D1Q3KQU3 841 aa7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 ELOA3BQ3SY89 546 aa7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 BICDL1Q6ZP65 573 aa7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 PHTF2Q8N3S3 785 aa7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 ELOA3Q8NG57 546 aa7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 KLF15Q9UIH9 416 aa7.62□□□□□ -1.19
HDGFL3-202ENST00000562702 STAU1O95793 577 aaKnown RBP7.61□□□□□ -1.19
HDGFL3-202ENST00000562702 ITGB7P26010 798 aa7.6□□□□□ -1.19
HDGFL3-202ENST00000562702 SCNN1DP51172 638 aa7.6□□□□□ -1.19
HDGFL3-202ENST00000562702 TSGA10IPQ3SY00 556 aa7.6□□□□□ -1.19
HDGFL3-202ENST00000562702 SAMD5Q5TGI4 173 aa7.6□□□□□ -1.19
HDGFL3-202ENST00000562702 NEUROD4Q9HD90 331 aa7.6□□□□□ -1.19
HDGFL3-202ENST00000562702 SNRKQ9NRH2 765 aa7.6□□□□□ -1.19
HDGFL3-202ENST00000562702 CABP1Q9NZU7 370 aa7.6□□□□□ -1.19
HDGFL3-202ENST00000562702 A6NJY4 79 aa7.59□□□□□ -1.19
HDGFL3-202ENST00000562702 CDK2AP1O14519 115 aa7.59□□□□□ -1.19
HDGFL3-202ENST00000562702 NEUROD1Q13562 356 aa7.59□□□□□ -1.19
HDGFL3-202ENST00000562702 RSPO4Q2I0M5 234 aaPredicted RBP7.59□□□□□ -1.19
HDGFL3-202ENST00000562702 NBPF11Q86T75 865 aa7.59□□□□□ -1.19
HDGFL3-202ENST00000562702 ZIC5Q96T25 663 aa7.59□□□□□ -1.19
HDGFL3-202ENST00000562702 SERTAD1Q9UHV2 236 aa7.59□□□□□ -1.19
HDGFL3-202ENST00000562702 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
HDGFL3-202ENST00000562702 ZFP64Q9NPA5 681 aa7.58□□□□□ -1.2
HDGFL3-202ENST00000562702 CHIC2Q9UKJ5 165 aa7.58□□□□□ -1.2
HDGFL3-202ENST00000562702 BACH1O14867 736 aa7.57□□□□□ -1.2
HDGFL3-202ENST00000562702 SYT9Q86SS6 491 aa7.57□□□□□ -1.2
HDGFL3-202ENST00000562702 BCANQ96GW7 911 aa7.57□□□□□ -1.2
HDGFL3-202ENST00000562702 SLC4A9Q96Q91 983 aa7.57□□□□□ -1.2
HDGFL3-202ENST00000562702 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
HDGFL3-202ENST00000562702 DYRK3O43781 588 aa7.56□□□□□ -1.2
HDGFL3-202ENST00000562702 SIN3BO75182 1162 aa7.56□□□□□ -1.2
HDGFL3-202ENST00000562702 MTFR1Q15390 333 aa7.56□□□□□ -1.2
HDGFL3-202ENST00000562702 NKAPLQ5M9Q1 402 aa7.56□□□□□ -1.2
HDGFL3-202ENST00000562702 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
HDGFL3-202ENST00000562702 TBC1D2BQ9UPU7 963 aa7.56□□□□□ -1.2
HDGFL3-202ENST00000562702 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
HDGFL3-202ENST00000562702 EFSO43281 561 aa7.55□□□□□ -1.2
HDGFL3-202ENST00000562702 ARTNQ5T4W7 220 aa7.55□□□□□ -1.2
HDGFL3-202ENST00000562702 PLPP7Q8NBV4 271 aa7.55□□□□□ -1.2
HDGFL3-202ENST00000562702 ADARB2-AS1A8MUL3 147 aa7.54□□□□□ -1.2
HDGFL3-202ENST00000562702 M0R082 166 aa7.54□□□□□ -1.2
HDGFL3-202ENST00000562702 SEMA3FQ13275 785 aa7.54□□□□□ -1.2
HDGFL3-202ENST00000562702 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
HDGFL3-202ENST00000562702 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
HDGFL3-202ENST00000562702 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-202ENST00000562702 GPC6Q9Y625 555 aaPredicted RBP7.54□□□□□ -1.2
HDGFL3-202ENST00000562702 SOX11P35716 441 aa7.53□□□□□ -1.2
HDGFL3-202ENST00000562702 PRDM6Q9NQX0 595 aa7.53□□□□□ -1.2
HDGFL3-202ENST00000562702 IQSEC3Q9UPP2 1182 aaPredicted RBP7.53□□□□□ -1.2
HDGFL3-202ENST00000562702 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
HDGFL3-202ENST00000562702 TMEM229AB2RXF0 380 aa7.52□□□□□ -1.21
HDGFL3-202ENST00000562702 C9orf172C9J069 976 aa7.52□□□□□ -1.21
HDGFL3-202ENST00000562702 STRN4Q9NRL3 753 aa7.52□□□□□ -1.21
HDGFL3-202ENST00000562702 HCN2Q9UL51 889 aa7.52□□□□□ -1.21
HDGFL3-202ENST00000562702 VAC14Q08AM6 782 aa7.51□□□□□ -1.21
HDGFL3-202ENST00000562702 PRSS36Q5K4E3 855 aa7.51□□□□□ -1.21
HDGFL3-202ENST00000562702 LRRC69Q6ZNQ3 347 aa7.51□□□□□ -1.21
HDGFL3-202ENST00000562702 ZNF295-AS1Q8N0V1 137 aa7.51□□□□□ -1.21
HDGFL3-202ENST00000562702 TNFRSF25Q93038 417 aa7.51□□□□□ -1.21
HDGFL3-202ENST00000562702 EML3Q32P44 896 aa7.5□□□□□ -1.21
HDGFL3-202ENST00000562702 TRAPPC3LQ5T215 181 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms