RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SSH3Q8TE77 659 aa12.13□□□□□ -0.47
SMG1-205ENST00000561947 SALL3Q9BXA9 1300 aa12.12□□□□□ -0.47
SMG1-205ENST00000561947 PDE1AP54750 535 aa12.12□□□□□ -0.47
SMG1-205ENST00000561947 HSCBQ8IWL3 235 aa12.12□□□□□ -0.47
SMG1-205ENST00000561947 SNX21Q969T3 373 aa12.12□□□□□ -0.47
SMG1-205ENST00000561947 ABCA3Q99758 1704 aa12.12□□□□□ -0.47
SMG1-205ENST00000561947 PARP4Q9UKK3 1724 aaKnown RBP12.12□□□□□ -0.47
SMG1-205ENST00000561947 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
SMG1-205ENST00000561947 PROSER3Q2NL68 480 aa12.12□□□□□ -0.47
SMG1-205ENST00000561947 KIF2CQ99661 725 aa12.12□□□□□ -0.47
SMG1-205ENST00000561947 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
SMG1-205ENST00000561947 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
SMG1-205ENST00000561947 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
SMG1-205ENST00000561947 HYPKQ9NX55 129 aa12.11□□□□□ -0.47
SMG1-205ENST00000561947 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
SMG1-205ENST00000561947 POLA2Q14181 598 aa12.11□□□□□ -0.47
SMG1-205ENST00000561947 KSR2Q6VAB6 950 aa12.11□□□□□ -0.47
SMG1-205ENST00000561947 SLAIN2Q9P270 581 aa12.11□□□□□ -0.47
SMG1-205ENST00000561947 ALDH1L1O75891 902 aa12.1□□□□□ -0.47
SMG1-205ENST00000561947 CASC1Q6TDU7 716 aa12.1□□□□□ -0.47
SMG1-205ENST00000561947 PPP1R42Q7Z4L9 355 aa12.1□□□□□ -0.47
SMG1-205ENST00000561947 DDX21Q9NR30 783 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMG1-205ENST00000561947 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
SMG1-205ENST00000561947 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
SMG1-205ENST00000561947 DCAF5Q96JK2 942 aa12.1□□□□□ -0.47
SMG1-205ENST00000561947 CYP27B1O15528 508 aa12.09□□□□□ -0.47
SMG1-205ENST00000561947 FRAT2O75474 233 aaPredicted RBP12.09□□□□□ -0.47
SMG1-205ENST00000561947 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
SMG1-205ENST00000561947 RAB11FIP3O75154 756 aa12.09□□□□□ -0.47
SMG1-205ENST00000561947 HSP90AB1P08238 724 aaKnown RBP12.09□□□□□ -0.47
SMG1-205ENST00000561947 MX1P20591 662 aa12.09□□□□□ -0.47
SMG1-205ENST00000561947 PDIA6Q15084 440 aa12.09□□□□□ -0.47
SMG1-205ENST00000561947 NHSL1Q5SYE7 1610 aa12.08□□□□□ -0.48
SMG1-205ENST00000561947 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
SMG1-205ENST00000561947 STAP2Q9UGK3 403 aa12.08□□□□□ -0.48
SMG1-205ENST00000561947 WDR17Q8IZU2 1322 aa12.08□□□□□ -0.48
SMG1-205ENST00000561947 SRGAP3O43295 1099 aa12.08□□□□□ -0.48
SMG1-205ENST00000561947 DDX58O95786 925 aaKnown RBP12.08□□□□□ -0.48
SMG1-205ENST00000561947 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
SMG1-205ENST00000561947 SURF6O75683 361 aaKnown RBP12.07□□□□□ -0.48
SMG1-205ENST00000561947 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
SMG1-205ENST00000561947 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
SMG1-205ENST00000561947 COL5A2P05997 1499 aaPredicted RBP12.07□□□□□ -0.48
SMG1-205ENST00000561947 AOX1Q06278 1338 aa12.07□□□□□ -0.48
SMG1-205ENST00000561947 MTX1Q13505 466 aa12.06□□□□□ -0.48
SMG1-205ENST00000561947 TSHZ3Q63HK5 1081 aa12.06□□□□□ -0.48
SMG1-205ENST00000561947 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
SMG1-205ENST00000561947 GLI3P10071 1580 aa12.06□□□□□ -0.48
SMG1-205ENST00000561947 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
SMG1-205ENST00000561947 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
SMG1-205ENST00000561947 C9orf78Q9NZ63 289 aaPredicted RBP12.06□□□□□ -0.48
SMG1-205ENST00000561947 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
SMG1-205ENST00000561947 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
SMG1-205ENST00000561947 ERC2O15083 957 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 REC8O95072 547 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 RHPN1Q8TCX5 695 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 KIF1BPQ96EK5 621 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 IL1RAPL2Q9NP60 686 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
SMG1-205ENST00000561947 CABP4P57796 275 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 AIMP1Q12904 312 aaKnown RBP12.05□□□□□ -0.48
SMG1-205ENST00000561947 CWF19L2Q2TBE0 894 aaKnown RBP12.05□□□□□ -0.48
SMG1-205ENST00000561947 HSP90AB4PQ58FF6 505 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 TOM1L2Q6ZVM7 507 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 SHANK3Q9BYB0 1731 aa12.05□□□□□ -0.48
SMG1-205ENST00000561947 RABEP1Q15276 862 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 FMNL2Q96PY5 1086 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
SMG1-205ENST00000561947 UTYO14607 1347 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 PCDH11XQ9BZA7 1347 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 PCDH11YQ9BZA8 1340 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 UBR2Q8IWV8 1755 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 GRM8O00222 908 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 CD2BP2O95400 341 aaKnown RBP12.04□□□□□ -0.48
SMG1-205ENST00000561947 MYL6BP14649 208 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
SMG1-205ENST00000561947 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
SMG1-205ENST00000561947 ZCRB1Q8TBF4 217 aaKnown RBP12.04□□□□□ -0.48
SMG1-205ENST00000561947 K7ELQ4 463 aaPredicted RBP12.03□□□□□ -0.48
SMG1-205ENST00000561947 DDIT3P35638 169 aa12.03□□□□□ -0.48
SMG1-205ENST00000561947 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
SMG1-205ENST00000561947 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
SMG1-205ENST00000561947 PAPPAQ13219 1627 aa12.03□□□□□ -0.48
SMG1-205ENST00000561947 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
SMG1-205ENST00000561947 CARD10Q9BWT7 1032 aa12.03□□□□□ -0.48
SMG1-205ENST00000561947 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
SMG1-205ENST00000561947 ARFGEF2Q9Y6D5 1785 aa12.02□□□□□ -0.48
SMG1-205ENST00000561947 AFDNP55196 1824 aaKnown RBP12.02□□□□□ -0.49
SMG1-205ENST00000561947 TRIM6-TRIM34B2RNG4 842 aa12.02□□□□□ -0.49
SMG1-205ENST00000561947 IGKV5-2P06315 115 aa12.02□□□□□ -0.49
SMG1-205ENST00000561947 COPS6Q7L5N1 327 aa12.02□□□□□ -0.49
SMG1-205ENST00000561947 ESYT1Q9BSJ8 1104 aa12.02□□□□□ -0.49
SMG1-205ENST00000561947 CHMLP26374 656 aa12.02□□□□□ -0.49
SMG1-205ENST00000561947 NEXNQ0ZGT2 675 aa12.02□□□□□ -0.49
SMG1-205ENST00000561947 RILPL2Q969X0 211 aa12.02□□□□□ -0.49
SMG1-205ENST00000561947 SUCLG2Q96I99 432 aa12.02□□□□□ -0.49
SMG1-205ENST00000561947 IL2RBP14784 551 aa12.01□□□□□ -0.49
SMG1-205ENST00000561947 KCNA4P22459 653 aa12.01□□□□□ -0.49
SMG1-205ENST00000561947 OS9Q13438 667 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms