RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PHACTR3Q96KR7 559 aa33.97■■■■□ 3.03
NME3-202ENST00000561637 DDR1Q08345 913 aa33.96■■■■□ 3.03
NME3-202ENST00000561637 FKBP8Q14318 412 aa33.96■■■■□ 3.03
NME3-202ENST00000561637 C16orf71Q8IYS4 520 aaPredicted RBP33.96■■■■□ 3.03
NME3-202ENST00000561637 KLRG1Q96E93 195 aa33.96■■■■□ 3.03
NME3-202ENST00000561637 CFAP53Q96M91 514 aa33.96■■■■□ 3.03
NME3-202ENST00000561637 RSPH6AQ9H0K4 717 aa33.96■■■■□ 3.03
NME3-202ENST00000561637 PRKAR2BP31323 418 aa33.95■■■■□ 3.03
NME3-202ENST00000561637 DNAJC10Q8IXB1 793 aa33.95■■■■□ 3.03
NME3-202ENST00000561637 DALRD3Q5D0E6 543 aaKnown RBP33.94■■■■□ 3.02
NME3-202ENST00000561637 CHRNA5P30532 468 aa33.93■■■■□ 3.02
NME3-202ENST00000561637 COL13A1Q5TAT6 717 aaPredicted RBP33.93■■■■□ 3.02
NME3-202ENST00000561637 RNF181Q9P0P0 153 aa33.93■■■■□ 3.02
NME3-202ENST00000561637 PCNTO95613 3336 aa33.93■■■■□ 3.02
NME3-202ENST00000561637 FSTL1Q12841 308 aa33.92■■■■□ 3.02
NME3-202ENST00000561637 IL17REQ8NFR9 667 aa33.92■■■■□ 3.02
NME3-202ENST00000561637 RRAGCQ9HB90 399 aa33.92■■■■□ 3.02
NME3-202ENST00000561637 TNRC6CQ9HCJ0 1690 aaKnown RBP33.92■■■■□ 3.02
NME3-202ENST00000561637 USP42Q9H9J4 1324 aaKnown RBP33.91■■■■□ 3.02
NME3-202ENST00000561637 INTS5Q6P9B9 1019 aaKnown RBP33.91■■■■□ 3.02
NME3-202ENST00000561637 JMYQ8N9B5 988 aa33.91■■■■□ 3.02
NME3-202ENST00000561637 KDM2BQ8NHM5 1336 aa33.89■■■■□ 3.02
NME3-202ENST00000561637 GAS2L2Q8NHY3 880 aa33.89■■■■□ 3.02
NME3-202ENST00000561637 GNAT3A8MTJ3 354 aa33.88■■■■□ 3.01
NME3-202ENST00000561637 U2AF1L5P0DN76 240 aaPredicted RBP33.88■■■■□ 3.01
NME3-202ENST00000561637 U2AF1Q01081 240 aaKnown RBP eCLIP33.88■■■■□ 3.01
NME3-202ENST00000561637 AFDNP55196 1824 aaKnown RBP33.86■■■■□ 3.01
NME3-202ENST00000561637 UBR2Q8IWV8 1755 aa33.85■■■■□ 3.01
NME3-202ENST00000561637 NUDCQ9Y266 331 aa33.85■■■■□ 3.01
NME3-202ENST00000561637 POLRMTO00411 1230 aaKnown RBP33.84■■■■□ 3.01
NME3-202ENST00000561637 CYP19A1P11511 503 aaPredicted RBP33.84■■■■□ 3.01
NME3-202ENST00000561637 TM4SF1P30408 202 aa33.84■■■■□ 3.01
NME3-202ENST00000561637 SIPA1L3O60292 1781 aaPredicted RBP33.84■■■■□ 3.01
NME3-202ENST00000561637 CCDC88AQ3V6T2 1871 aa33.83■■■■□ 3.01
NME3-202ENST00000561637 RASSF7Q02833 373 aa33.8■■■■□ 3
NME3-202ENST00000561637 TEFQ10587 303 aa33.8■■■■□ 3
NME3-202ENST00000561637 ZBTB1Q9Y2K1 713 aa33.8■■■■□ 3
NME3-202ENST00000561637 CEMIPQ8WUJ3 1361 aa33.8■■■■□ 3
NME3-202ENST00000561637 SOS1Q07889 1333 aaPredicted RBP33.79■■■■□ 3
NME3-202ENST00000561637 KCNQ3O43525 872 aa33.79■■■■□ 3
NME3-202ENST00000561637 USPL1Q5W0Q7 1092 aa33.78■■■■□ 3
NME3-202ENST00000561637 ZNF496Q96IT1 587 aaPredicted RBP33.78■■■■□ 3
NME3-202ENST00000561637 CAPN15O75808 1086 aa33.77■■■■□ 3
NME3-202ENST00000561637 PRELPP51888 382 aa33.77■■■■□ 3
NME3-202ENST00000561637 DLEC1Q9Y238 1755 aa33.77■■■■□ 3
NME3-202ENST00000561637 SMC1BQ8NDV3 1235 aa33.76■■■□□ 2.99
NME3-202ENST00000561637 NRXN2Q9P2S2 1712 aa33.76■■■□□ 2.99
NME3-202ENST00000561637 MCM10Q7L590 875 aa33.75■■■□□ 2.99
NME3-202ENST00000561637 TTC5Q8N0Z6 440 aa33.75■■■□□ 2.99
NME3-202ENST00000561637 DCTN1Q14203 1278 aa33.74■■■□□ 2.99
NME3-202ENST00000561637 ZNF790Q6PG37 636 aa33.74■■■□□ 2.99
NME3-202ENST00000561637 ZPR1O75312 459 aa33.73■■■□□ 2.99
NME3-202ENST00000561637 DDX10Q13206 875 aaKnown RBP33.73■■■□□ 2.99
NME3-202ENST00000561637 VSIG10Q8N0Z9 540 aa33.73■■■□□ 2.99
NME3-202ENST00000561637 TIAM2Q8IVF5 1701 aa33.72■■■□□ 2.99
NME3-202ENST00000561637 COL15A1P39059 1388 aa33.72■■■□□ 2.99
NME3-202ENST00000561637 HEG1Q9ULI3 1381 aa33.72■■■□□ 2.99
NME3-202ENST00000561637 NFIXQ14938 502 aa33.71■■■□□ 2.99
NME3-202ENST00000561637 CANXP27824 592 aaKnown RBP33.7■■■□□ 2.99
NME3-202ENST00000561637 TNS4Q8IZW8 715 aa33.7■■■□□ 2.99
NME3-202ENST00000561637 LMNB1P20700 586 aa33.68■■■□□ 2.98
NME3-202ENST00000561637 ZC3H4Q9UPT8 1303 aaKnown RBP33.68■■■□□ 2.98
NME3-202ENST00000561637 GLTPD2A6NH11 291 aa33.67■■■□□ 2.98
NME3-202ENST00000561637 BTBD11A6QL63 1104 aa33.67■■■□□ 2.98
NME3-202ENST00000561637 BCL2L12Q9HB09 334 aa33.67■■■□□ 2.98
NME3-202ENST00000561637 NARFQ9UHQ1 456 aa33.67■■■□□ 2.98
NME3-202ENST00000561637 VEGFAP15692 232 aaPredicted RBP33.65■■■□□ 2.98
NME3-202ENST00000561637 PRAMEF22A3QJZ6 481 aa33.64■■■□□ 2.98
NME3-202ENST00000561637 SERPINB2P05120 415 aa33.64■■■□□ 2.98
NME3-202ENST00000561637 STARD3NLO95772 234 aa33.63■■■□□ 2.97
NME3-202ENST00000561637 RTF1Q92541 710 aaKnown RBP33.63■■■□□ 2.97
NME3-202ENST00000561637 FMNL2Q96PY5 1086 aa33.63■■■□□ 2.97
NME3-202ENST00000561637 PLEKHF1Q96S99 279 aa33.63■■■□□ 2.97
NME3-202ENST00000561637 CARMIL3Q8ND23 1372 aa33.62■■■□□ 2.97
NME3-202ENST00000561637 EIF5P55010 431 aaKnown RBP33.62■■■□□ 2.97
NME3-202ENST00000561637 TTLL6Q8N841 843 aa33.62■■■□□ 2.97
NME3-202ENST00000561637 A1BGP04217 495 aa33.61■■■□□ 2.97
NME3-202ENST00000561637 HSPA1AP0DMV8 641 aaKnown RBP33.61■■■□□ 2.97
NME3-202ENST00000561637 HSPA1BP0DMV9 641 aaKnown RBP33.61■■■□□ 2.97
NME3-202ENST00000561637 DLG5Q8TDM6 1919 aa33.61■■■□□ 2.97
NME3-202ENST00000561637 ANKRD31Q8N7Z5 1873 aa33.61■■■□□ 2.97
NME3-202ENST00000561637 POTECB2RU33 542 aa33.6■■■□□ 2.97
NME3-202ENST00000561637 NFKBIEO00221 500 aa33.6■■■□□ 2.97
NME3-202ENST00000561637 PIP4K2AP48426 406 aaPredicted RBP33.6■■■□□ 2.97
NME3-202ENST00000561637 C2CD5Q86YS7 1000 aa33.6■■■□□ 2.97
NME3-202ENST00000561637 DICER1Q9UPY3 1922 aaKnown RBP33.59■■■□□ 2.97
NME3-202ENST00000561637 MIS18AQ9NYP9 233 aa33.59■■■□□ 2.97
NME3-202ENST00000561637 ZNF330Q9Y3S2 320 aaPredicted RBP33.59■■■□□ 2.97
NME3-202ENST00000561637 THUMPD2Q9BTF0 503 aaKnown RBP33.58■■■□□ 2.97
NME3-202ENST00000561637 RALBP1Q15311 655 aa33.57■■■□□ 2.96
NME3-202ENST00000561637 USP16Q9Y5T5 823 aa33.57■■■□□ 2.96
NME3-202ENST00000561637 HTATSF1O43719 755 aaKnown RBP33.55■■■□□ 2.96
NME3-202ENST00000561637 TBC1D2BQ9UPU7 963 aa33.55■■■□□ 2.96
NME3-202ENST00000561637 FER1L6Q2WGJ9 1857 aa33.54■■■□□ 2.96
NME3-202ENST00000561637 H0YIN7 160 aa33.54■■■□□ 2.96
NME3-202ENST00000561637 TEX13AQ9BXU3 409 aaPredicted RBP33.54■■■□□ 2.96
NME3-202ENST00000561637 NFE2L2Q16236 605 aa33.53■■■□□ 2.96
NME3-202ENST00000561637 BICDL1Q6ZP65 573 aa33.53■■■□□ 2.96
NME3-202ENST00000561637 COL11A2P13942 1736 aaPredicted RBP33.53■■■□□ 2.96
NME3-202ENST00000561637 SCN7AQ01118 1682 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms