RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
SEMA4B-220ENST00000561321 FMNL2Q96PY5 1086 aa16.37■□□□□ 0.21
SEMA4B-220ENST00000561321 COL15A1P39059 1388 aa16.37■□□□□ 0.21
SEMA4B-220ENST00000561321 HEG1Q9ULI3 1381 aa16.37■□□□□ 0.21
SEMA4B-220ENST00000561321 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
SEMA4B-220ENST00000561321 DLG5Q8TDM6 1919 aa16.35■□□□□ 0.21
SEMA4B-220ENST00000561321 ZNF330Q9Y3S2 320 aaPredicted RBP16.35■□□□□ 0.21
SEMA4B-220ENST00000561321 N4BP2Q86UW6 1770 aaPredicted RBP16.35■□□□□ 0.21
SEMA4B-220ENST00000561321 KIF13BQ9NQT8 1826 aa16.34■□□□□ 0.21
SEMA4B-220ENST00000561321 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
SEMA4B-220ENST00000561321 PLEKHF1Q96S99 279 aa16.34■□□□□ 0.21
SEMA4B-220ENST00000561321 TEX13AQ9BXU3 409 aaPredicted RBP16.34■□□□□ 0.21
SEMA4B-220ENST00000561321 MAPK8IP3Q9UPT6 1336 aa16.34■□□□□ 0.21
SEMA4B-220ENST00000561321 C10orf71Q711Q0 1435 aa16.34■□□□□ 0.21
SEMA4B-220ENST00000561321 DDR1Q08345 913 aa16.33■□□□□ 0.2
SEMA4B-220ENST00000561321 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
SEMA4B-220ENST00000561321 NARFQ9UHQ1 456 aa16.33■□□□□ 0.2
SEMA4B-220ENST00000561321 MYBBP1AQ9BQG0 1328 aaKnown RBP16.33■□□□□ 0.2
SEMA4B-220ENST00000561321 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
SEMA4B-220ENST00000561321 A0A0G2JLW4 131 aa16.32■□□□□ 0.2
SEMA4B-220ENST00000561321 A1BGP04217 495 aa16.32■□□□□ 0.2
SEMA4B-220ENST00000561321 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
SEMA4B-220ENST00000561321 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
SEMA4B-220ENST00000561321 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
SEMA4B-220ENST00000561321 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
SEMA4B-220ENST00000561321 TGFB2P61812 414 aa16.31■□□□□ 0.2
SEMA4B-220ENST00000561321 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
SEMA4B-220ENST00000561321 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
SEMA4B-220ENST00000561321 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
SEMA4B-220ENST00000561321 DPEP1P16444 411 aa16.3■□□□□ 0.2
SEMA4B-220ENST00000561321 TM4SF1P30408 202 aa16.3■□□□□ 0.2
SEMA4B-220ENST00000561321 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
SEMA4B-220ENST00000561321 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
SEMA4B-220ENST00000561321 USP16Q9Y5T5 823 aa16.3■□□□□ 0.2
SEMA4B-220ENST00000561321 A0A087WZG4 1122 aa16.29■□□□□ 0.2
SEMA4B-220ENST00000561321 PIP4K2AP48426 406 aaPredicted RBP16.29■□□□□ 0.2
SEMA4B-220ENST00000561321 NFIXQ14938 502 aa16.29■□□□□ 0.2
SEMA4B-220ENST00000561321 BICDL1Q6ZP65 573 aa16.29■□□□□ 0.2
SEMA4B-220ENST00000561321 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
SEMA4B-220ENST00000561321 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
SEMA4B-220ENST00000561321 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
SEMA4B-220ENST00000561321 SNRPA1P09661 255 aaKnown RBP16.28■□□□□ 0.2
SEMA4B-220ENST00000561321 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
SEMA4B-220ENST00000561321 IL6STP40189 918 aaPredicted RBP16.28■□□□□ 0.2
SEMA4B-220ENST00000561321 BCS1LQ9Y276 419 aa16.28■□□□□ 0.2
SEMA4B-220ENST00000561321 AFDNP55196 1824 aaKnown RBP16.28■□□□□ 0.2
SEMA4B-220ENST00000561321 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.2
SEMA4B-220ENST00000561321 RIPK4P57078 832 aa16.26■□□□□ 0.19
SEMA4B-220ENST00000561321 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
SEMA4B-220ENST00000561321 SCN7AQ01118 1682 aa16.26■□□□□ 0.19
SEMA4B-220ENST00000561321 KDM3BQ7LBC6 1761 aa16.26■□□□□ 0.19
SEMA4B-220ENST00000561321 SERPINB2P05120 415 aa16.25■□□□□ 0.19
SEMA4B-220ENST00000561321 CHRNA5P30532 468 aa16.25■□□□□ 0.19
SEMA4B-220ENST00000561321 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
SEMA4B-220ENST00000561321 PNISRQ8TF01 805 aaKnown RBP16.25■□□□□ 0.19
SEMA4B-220ENST00000561321 PRKRIP1Q9H875 184 aaPredicted RBP16.25■□□□□ 0.19
SEMA4B-220ENST00000561321 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
SEMA4B-220ENST00000561321 KCNA3P22001 575 aa16.24■□□□□ 0.19
SEMA4B-220ENST00000561321 DZIP3Q86Y13 1208 aaKnown RBP16.24■□□□□ 0.19
SEMA4B-220ENST00000561321 RRP7AQ9Y3A4 280 aaKnown RBP16.24■□□□□ 0.19
SEMA4B-220ENST00000561321 NRXN2Q9P2S2 1712 aa16.23■□□□□ 0.19
SEMA4B-220ENST00000561321 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
SEMA4B-220ENST00000561321 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
SEMA4B-220ENST00000561321 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
SEMA4B-220ENST00000561321 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
SEMA4B-220ENST00000561321 ARHGAP27Q6ZUM4 889 aa16.22■□□□□ 0.19
SEMA4B-220ENST00000561321 LAMB4A4D0S4 1761 aa16.22■□□□□ 0.19
SEMA4B-220ENST00000561321 BCORQ6W2J9 1755 aa16.22■□□□□ 0.19
SEMA4B-220ENST00000561321 ATP10DQ9P241 1426 aa16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 NBPF26B4DH59 902 aa16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 EIF4A1P60842 406 aaKnown RBP16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 NBPF10Q6P3W6 841 aaKnown RBP16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 NBPF15Q8N660 670 aa16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 TSPYL4Q9UJ04 414 aa16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 ADAMTS8Q9UP79 889 aa16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 CARMIL3Q8ND23 1372 aa16.21■□□□□ 0.19
SEMA4B-220ENST00000561321 NPHP1O15259 732 aa16.2■□□□□ 0.18
SEMA4B-220ENST00000561321 GIGYF1O75420 1035 aaPredicted RBP16.2■□□□□ 0.18
SEMA4B-220ENST00000561321 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
SEMA4B-220ENST00000561321 CCDC24Q8N4L8 307 aa16.2■□□□□ 0.18
SEMA4B-220ENST00000561321 RUNDC1Q96C34 613 aa16.2■□□□□ 0.18
SEMA4B-220ENST00000561321 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
SEMA4B-220ENST00000561321 ARFGEF1Q9Y6D6 1849 aa16.19■□□□□ 0.18
SEMA4B-220ENST00000561321 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
SEMA4B-220ENST00000561321 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
SEMA4B-220ENST00000561321 C2CD5Q86YS7 1000 aa16.18■□□□□ 0.18
SEMA4B-220ENST00000561321 ZNF652Q9Y2D9 606 aa16.18■□□□□ 0.18
SEMA4B-220ENST00000561321 PRR5LQ6MZQ0 368 aa16.17■□□□□ 0.18
SEMA4B-220ENST00000561321 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
SEMA4B-220ENST00000561321 ADCY9O60503 1353 aa16.16■□□□□ 0.18
SEMA4B-220ENST00000561321 H0YIN7 160 aa16.16■□□□□ 0.18
SEMA4B-220ENST00000561321 MYL6BP14649 208 aa16.16■□□□□ 0.18
SEMA4B-220ENST00000561321 CNBD1Q8NA66 436 aa16.16■□□□□ 0.18
SEMA4B-220ENST00000561321 LAS1LQ9Y4W2 734 aaKnown RBP16.16■□□□□ 0.18
SEMA4B-220ENST00000561321 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
SEMA4B-220ENST00000561321 ST5P78524 1137 aa16.15■□□□□ 0.18
SEMA4B-220ENST00000561321 CLEC4GQ6UXB4 293 aa16.15■□□□□ 0.18
SEMA4B-220ENST00000561321 GPBP1L1Q9HC44 474 aaPredicted RBP16.15■□□□□ 0.18
SEMA4B-220ENST00000561321 NIP7Q9Y221 180 aaKnown RBP eCLIP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms