RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CCDC85AQ96PX6 553 aaPredicted RBP6.74□□□□□ -1.33
HERC1-211ENST00000560983 ADAMTS8Q9UP79 889 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 TTC37Q6PGP7 1564 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 DENND4BO75064 1496 aaPredicted RBP6.73□□□□□ -1.33
HERC1-211ENST00000560983 ATP10BO94823 1461 aa6.73□□□□□ -1.33
HERC1-211ENST00000560983 RHOQP17081 205 aa6.73□□□□□ -1.33
HERC1-211ENST00000560983 SRSF11Q05519 484 aaKnown RBP6.73□□□□□ -1.33
HERC1-211ENST00000560983 CEP126Q9P2H0 1117 aa6.73□□□□□ -1.33
HERC1-211ENST00000560983 CHIC2Q9UKJ5 165 aa6.73□□□□□ -1.33
HERC1-211ENST00000560983 DYRK1BQ9Y463 629 aa6.73□□□□□ -1.33
HERC1-211ENST00000560983 PCDHB11Q9Y5F2 797 aa6.73□□□□□ -1.33
HERC1-211ENST00000560983 NCOA1Q15788 1441 aa6.73□□□□□ -1.33
HERC1-211ENST00000560983 SIGLEC1Q9BZZ2 1709 aa6.73□□□□□ -1.33
HERC1-211ENST00000560983 ARHGEF40Q8TER5 1519 aa6.72□□□□□ -1.33
HERC1-211ENST00000560983 ARHGEF12Q9NZN5 1544 aa6.72□□□□□ -1.33
HERC1-211ENST00000560983 MEN1O00255 615 aa6.72□□□□□ -1.33
HERC1-211ENST00000560983 GNRH1P01148 92 aa6.72□□□□□ -1.33
HERC1-211ENST00000560983 DBN1Q16643 649 aa6.72□□□□□ -1.33
HERC1-211ENST00000560983 TBC1D2BQ9UPU7 963 aa6.72□□□□□ -1.33
HERC1-211ENST00000560983 ABCA8O94911 1581 aa6.72□□□□□ -1.33
HERC1-211ENST00000560983 TOM1O60784 492 aa6.71□□□□□ -1.34
HERC1-211ENST00000560983 IL2RAP01589 272 aa6.71□□□□□ -1.34
HERC1-211ENST00000560983 NBPF10Q6P3W6 841 aaKnown RBP6.71□□□□□ -1.34
HERC1-211ENST00000560983 POTEAQ6S8J7 498 aa6.71□□□□□ -1.34
HERC1-211ENST00000560983 NBPF15Q8N660 670 aa6.71□□□□□ -1.34
HERC1-211ENST00000560983 CDCA7Q9BWT1 371 aaPredicted RBP6.71□□□□□ -1.34
HERC1-211ENST00000560983 ARHGEF10LQ9HCE6 1279 aa6.71□□□□□ -1.34
HERC1-211ENST00000560983 KIAA0556O60303 1618 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 ABCA9Q8IUA7 1624 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 ADAMTS2O95450 1211 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 POU4F2Q12837 409 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 LYPD4Q6UWN0 246 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 SVOPQ8N4V2 548 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 XAGE2Q96GT9 111 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 ESYT1Q9BSJ8 1104 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 PREX1Q8TCU6 1659 aa6.7□□□□□ -1.34
HERC1-211ENST00000560983 MAGI2Q86UL8 1455 aa6.69□□□□□ -1.34
HERC1-211ENST00000560983 NLRP3Q96P20 1036 aa6.69□□□□□ -1.34
HERC1-211ENST00000560983 FHDC1Q9C0D6 1143 aaPredicted RBP6.69□□□□□ -1.34
HERC1-211ENST00000560983 MBIPQ9NS73 344 aa6.69□□□□□ -1.34
HERC1-211ENST00000560983 TRAPPC8Q9Y2L5 1435 aa6.68□□□□□ -1.34
HERC1-211ENST00000560983 H7C1W4 665 aa6.68□□□□□ -1.34
HERC1-211ENST00000560983 RNF225M0QZC1 329 aaPredicted RBP6.68□□□□□ -1.34
HERC1-211ENST00000560983 WASLO00401 505 aaPredicted RBP6.68□□□□□ -1.34
HERC1-211ENST00000560983 THBS1P07996 1170 aa6.68□□□□□ -1.34
HERC1-211ENST00000560983 SLC27A3Q5K4L6 730 aa6.68□□□□□ -1.34
HERC1-211ENST00000560983 ATP10AO60312 1499 aa6.67□□□□□ -1.34
HERC1-211ENST00000560983 ZFYVE16Q7Z3T8 1539 aa6.67□□□□□ -1.34
HERC1-211ENST00000560983 CELA2BP08218 269 aaPredicted RBP6.67□□□□□ -1.34
HERC1-211ENST00000560983 RASSF7Q02833 373 aa6.67□□□□□ -1.34
HERC1-211ENST00000560983 CENPCQ03188 943 aa6.67□□□□□ -1.34
HERC1-211ENST00000560983 TAS1R3Q7RTX0 852 aa6.67□□□□□ -1.34
HERC1-211ENST00000560983 CNKSR1Q969H4 720 aa6.67□□□□□ -1.34
HERC1-211ENST00000560983 ZMYM4Q5VZL5 1548 aa6.66□□□□□ -1.34
HERC1-211ENST00000560983 EIF4G2P78344 907 aaKnown RBP eCLIP6.66□□□□□ -1.34
HERC1-211ENST00000560983 UBAP2LQ14157 1087 aaKnown RBP6.66□□□□□ -1.34
HERC1-211ENST00000560983 TSGA10IPQ3SY00 556 aa6.66□□□□□ -1.34
HERC1-211ENST00000560983 RAB6BQ9NRW1 208 aa6.66□□□□□ -1.34
HERC1-211ENST00000560983 GPR25O00155 361 aa6.65□□□□□ -1.34
HERC1-211ENST00000560983 MYCP01106 439 aaPredicted RBP6.65□□□□□ -1.34
HERC1-211ENST00000560983 F11P03951 625 aa6.65□□□□□ -1.34
HERC1-211ENST00000560983 TMEM151AQ8N4L1 468 aa6.65□□□□□ -1.34
HERC1-211ENST00000560983 PRM3Q9NNZ6 103 aa6.65□□□□□ -1.34
HERC1-211ENST00000560983 TIMMDC1Q9NPL8 285 aa6.65□□□□□ -1.34
HERC1-211ENST00000560983 LRRC4BQ9NT99 713 aa6.65□□□□□ -1.34
HERC1-211ENST00000560983 C9orf84Q5VXU9 1444 aa6.65□□□□□ -1.35
HERC1-211ENST00000560983 EFCAB5A4FU69 1503 aa6.65□□□□□ -1.35
HERC1-211ENST00000560983 RICTORQ6R327 1708 aa6.64□□□□□ -1.35
HERC1-211ENST00000560983 MCM6Q14566 821 aa6.64□□□□□ -1.35
HERC1-211ENST00000560983 RIPOR1Q6ZS17 1223 aa6.64□□□□□ -1.35
HERC1-211ENST00000560983 GTPBP3Q969Y2 492 aaKnown RBP6.64□□□□□ -1.35
HERC1-211ENST00000560983 GAS2L1Q99501 681 aaPredicted RBP6.64□□□□□ -1.35
HERC1-211ENST00000560983 ETNK1Q9HBU6 452 aa6.64□□□□□ -1.35
HERC1-211ENST00000560983 FER1L4A9Z1Z3 1794 aa6.64□□□□□ -1.35
HERC1-211ENST00000560983 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 GDF11O95390 407 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 VAC14Q08AM6 782 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 USP4Q13107 963 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 LBRQ14739 615 aaKnown RBP6.63□□□□□ -1.35
HERC1-211ENST00000560983 ESCO1Q5FWF5 840 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 CAMSAP1Q5T5Y3 1602 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 FOXR1Q6PIV2 292 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 HECW1Q76N89 1606 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 KCTD17Q8N5Z5 321 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 ZSCAN10Q96SZ4 725 aaPredicted RBP6.63□□□□□ -1.35
HERC1-211ENST00000560983 CFHR5Q9BXR6 569 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 SCAPERQ9BY12 1400 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 NUCKS1Q9H1E3 243 aaKnown RBP6.63□□□□□ -1.35
HERC1-211ENST00000560983 DOLKQ9UPQ8 538 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 RAPGEF2Q9Y4G8 1499 aa6.63□□□□□ -1.35
HERC1-211ENST00000560983 SETD1BQ9UPS6 1966 aaKnown RBP6.62□□□□□ -1.35
HERC1-211ENST00000560983 ALKQ9UM73 1620 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 GOLGA3Q08378 1498 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 A0A1B0GTH6 734 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 SCNN1DP51172 638 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 WASHC4Q2M389 1173 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 C4orf17Q53FE4 359 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 KANK3Q6NY19 840 aa6.62□□□□□ -1.35
HERC1-211ENST00000560983 PPARGC1BQ86YN6 1023 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms