RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 NT5C2P49902 561 aa7.02□□□□□ -1.29
ZEB1-219ENST00000560721 SLC10A5Q5PT55 438 aa7.02□□□□□ -1.29
ZEB1-219ENST00000560721 NPM2Q86SE8 214 aaKnown RBP7.02□□□□□ -1.29
ZEB1-219ENST00000560721 IL17REQ8NFR9 667 aa7.02□□□□□ -1.29
ZEB1-219ENST00000560721 BTG4Q9NY30 223 aa7.02□□□□□ -1.29
ZEB1-219ENST00000560721 EPB41L2O43491 1005 aaKnown RBP7.01□□□□□ -1.29
ZEB1-219ENST00000560721 PRKAR2BP31323 418 aa7.01□□□□□ -1.29
ZEB1-219ENST00000560721 LARP1Q6PKG0 1096 aaKnown RBP7.01□□□□□ -1.29
ZEB1-219ENST00000560721 WDR90Q96KV7 1748 aa7.01□□□□□ -1.29
ZEB1-219ENST00000560721 COL2A1P02458 1487 aaPredicted RBP7.01□□□□□ -1.29
ZEB1-219ENST00000560721 NEFMP07197 916 aa7.01□□□□□ -1.29
ZEB1-219ENST00000560721 C15orf52Q6ZUT6 534 aaKnown RBP7.01□□□□□ -1.29
ZEB1-219ENST00000560721 HYPKQ9NX55 129 aa7.01□□□□□ -1.29
ZEB1-219ENST00000560721 MYH13Q9UKX3 1938 aa7.01□□□□□ -1.29
ZEB1-219ENST00000560721 EXOC5O00471 708 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 HSP90B1P14625 803 aaKnown RBP7□□□□□ -1.29
ZEB1-219ENST00000560721 TMC4Q7Z404 712 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 TIAM2Q8IVF5 1701 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 MARCH10Q8NA82 808 aaPredicted RBP7□□□□□ -1.29
ZEB1-219ENST00000560721 IL17RAQ96F46 866 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 VAMP4O75379 141 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 IRX6P78412 446 aaPredicted RBP7□□□□□ -1.29
ZEB1-219ENST00000560721 SULT6B1Q6IMI4 303 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 LMOD2Q6P5Q4 547 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7□□□□□ -1.293e-6■■■■□ 22.7
ZEB1-219ENST00000560721 FAM9BQ8IZU0 186 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 NECTIN2Q92692 538 aa7□□□□□ -1.29
ZEB1-219ENST00000560721 USP42Q9H9J4 1324 aaKnown RBP6.99□□□□□ -1.29
ZEB1-219ENST00000560721 GIGYF1O75420 1035 aaPredicted RBP6.99□□□□□ -1.29
ZEB1-219ENST00000560721 FMNL2Q96PY5 1086 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 DDX21Q9NR30 783 aaKnown RBP eCLIP6.99□□□□□ -1.29
ZEB1-219ENST00000560721 LOC285556D6RIA3 1793 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 TAF1P21675 1872 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 RXRBP28702 533 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 PDIA6Q15084 440 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 HSP90AB3PQ58FF7 597 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 C1orf141Q5JVX7 400 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 CAMKK2Q96RR4 588 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 AOX1Q06278 1338 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 SNRPA1P09661 255 aaKnown RBP6.99□□□□□ -1.29
ZEB1-219ENST00000560721 DDB1Q16531 1140 aa6.99□□□□□ -1.29
ZEB1-219ENST00000560721 MRPL50Q8N5N7 158 aaKnown RBP6.99□□□□□ -1.29
ZEB1-219ENST00000560721 RRS1Q15050 365 aaKnown RBP6.98□□□□□ -1.29
ZEB1-219ENST00000560721 CC2D1BQ5T0F9 858 aaKnown RBP6.98□□□□□ -1.29
ZEB1-219ENST00000560721 ZNF790Q6PG37 636 aa6.98□□□□□ -1.29
ZEB1-219ENST00000560721 PHACTR3Q96KR7 559 aa6.98□□□□□ -1.29
ZEB1-219ENST00000560721 PALLDQ8WX93 1383 aa6.98□□□□□ -1.29
ZEB1-219ENST00000560721 EIF5P55010 431 aaKnown RBP6.97□□□□□ -1.29
ZEB1-219ENST00000560721 SAFB2Q14151 953 aaKnown RBP eCLIP6.97□□□□□ -1.29
ZEB1-219ENST00000560721 ZC3H4Q9UPT8 1303 aaKnown RBP6.97□□□□□ -1.29
ZEB1-219ENST00000560721 RABL6Q3YEC7 729 aaPredicted RBP6.97□□□□□ -1.29
ZEB1-219ENST00000560721 B4GALNT3Q6L9W6 998 aa6.97□□□□□ -1.29
ZEB1-219ENST00000560721 KRT27Q7Z3Y8 459 aa6.97□□□□□ -1.29
ZEB1-219ENST00000560721 ISCA1Q9BUE6 129 aa6.97□□□□□ -1.29
ZEB1-219ENST00000560721 COL1A1P02452 1464 aaPredicted RBP6.97□□□□□ -1.29
ZEB1-219ENST00000560721 SCN4AP35499 1836 aa6.97□□□□□ -1.29
ZEB1-219ENST00000560721 CYP19A1P11511 503 aaPredicted RBP6.97□□□□□ -1.29
ZEB1-219ENST00000560721 CCDC30Q5VVM6 783 aa6.97□□□□□ -1.29
ZEB1-219ENST00000560721 ZNF512BQ96KM6 892 aaPredicted RBP6.97□□□□□ -1.29
ZEB1-219ENST00000560721 API5Q9BZZ5 524 aaKnown RBP6.97□□□□□ -1.29
ZEB1-219ENST00000560721 LTBP3Q9NS15 1303 aa6.97□□□□□ -1.29
ZEB1-219ENST00000560721 RPS6KA4O75676 772 aa6.96□□□□□ -1.29
ZEB1-219ENST00000560721 PARP10Q53GL7 1025 aa6.96□□□□□ -1.29
ZEB1-219ENST00000560721 GPR108Q9NPR9 543 aa6.96□□□□□ -1.29
ZEB1-219ENST00000560721 SBF1O95248 1867 aa6.96□□□□□ -1.29
ZEB1-219ENST00000560721 CCDC88AQ3V6T2 1871 aa6.96□□□□□ -1.29
ZEB1-219ENST00000560721 GREB1LQ9C091 1923 aaPredicted RBP6.96□□□□□ -1.3
ZEB1-219ENST00000560721 RIPK4P57078 832 aa6.96□□□□□ -1.3
ZEB1-219ENST00000560721 DBF4Q9UBU7 674 aaPredicted RBP6.96□□□□□ -1.3
ZEB1-219ENST00000560721 U2AF1L5P0DN76 240 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 RARSP54136 660 aaKnown RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 U2AF1Q01081 240 aaKnown RBP eCLIP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 ZNF530Q6P9A1 599 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 MBIPQ9NS73 344 aa6.95□□□□□ -1.3
ZEB1-219ENST00000560721 ADCY9O60503 1353 aa6.95□□□□□ -1.3
ZEB1-219ENST00000560721 IPO8O15397 1037 aaKnown RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 MAP4K4O95819 1239 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 CCT4P50991 539 aaKnown RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 CASP7P55210 303 aa6.95□□□□□ -1.3
ZEB1-219ENST00000560721 FKBP1AP62942 108 aaKnown RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 TOM1L2Q6ZVM7 507 aa6.95□□□□□ -1.3
ZEB1-219ENST00000560721 QTRT2Q9H974 415 aaKnown RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 HDAC1Q13547 482 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 ILDR1Q86SU0 546 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-219ENST00000560721 ZNF34Q8IZ26 560 aa6.95□□□□□ -1.3
ZEB1-219ENST00000560721 PLBD2Q8NHP8 589 aa6.95□□□□□ -1.3
ZEB1-219ENST00000560721 CDK5RAP2Q96SN8 1893 aa6.95□□□□□ -1.3
ZEB1-219ENST00000560721 INTS5Q6P9B9 1019 aaKnown RBP6.94□□□□□ -1.3
ZEB1-219ENST00000560721 SEPT12Q8IYM1 358 aa6.94□□□□□ -1.3
ZEB1-219ENST00000560721 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-219ENST00000560721 AK9Q5TCS8 1911 aa6.94□□□□□ -1.3
ZEB1-219ENST00000560721 RTF1Q92541 710 aaKnown RBP6.94□□□□□ -1.3
ZEB1-219ENST00000560721 ANO8Q9HCE9 1232 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-219ENST00000560721 AKAP11Q9UKA4 1901 aa6.94□□□□□ -1.3
ZEB1-219ENST00000560721 RGS22Q8NE09 1264 aa6.94□□□□□ -1.3
ZEB1-219ENST00000560721 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
ZEB1-219ENST00000560721 CIAO1O76071 339 aa6.93□□□□□ -1.3
ZEB1-219ENST00000560721 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
ZEB1-219ENST00000560721 MAP3K15Q6ZN16 1313 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms