RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 WDR90Q96KV7 1748 aa16.36■□□□□ 0.21
MARK3-221ENST00000560603 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
MARK3-221ENST00000560603 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
MARK3-221ENST00000560603 LMNB1P20700 586 aa16.34■□□□□ 0.21
MARK3-221ENST00000560603 NFIXQ14938 502 aa16.34■□□□□ 0.21
MARK3-221ENST00000560603 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
MARK3-221ENST00000560603 COL15A1P39059 1388 aa16.34■□□□□ 0.21
MARK3-221ENST00000560603 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
MARK3-221ENST00000560603 STARD3NLO95772 234 aa16.33■□□□□ 0.2
MARK3-221ENST00000560603 SERPINB2P05120 415 aa16.33■□□□□ 0.2
MARK3-221ENST00000560603 SLC39A6Q13433 755 aa16.33■□□□□ 0.2
MARK3-221ENST00000560603 TTLL6Q8N841 843 aa16.33■□□□□ 0.2
MARK3-221ENST00000560603 JMYQ8N9B5 988 aa16.33■□□□□ 0.2
MARK3-221ENST00000560603 H0YIN7 160 aa16.32■□□□□ 0.2
MARK3-221ENST00000560603 SBF1O95248 1867 aa16.32■□□□□ 0.2
MARK3-221ENST00000560603 HMOX1P09601 288 aa16.32■□□□□ 0.2
MARK3-221ENST00000560603 VEGFAP15692 232 aaPredicted RBP16.32■□□□□ 0.2
MARK3-221ENST00000560603 MRC1P22897 1456 aa16.32■□□□□ 0.2
MARK3-221ENST00000560603 TTC5Q8N0Z6 440 aa16.32■□□□□ 0.2
MARK3-221ENST00000560603 ZBTB1Q9Y2K1 713 aa16.32■□□□□ 0.2
MARK3-221ENST00000560603 PCNTO95613 3336 aa16.32■□□□□ 0.2
MARK3-221ENST00000560603 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
MARK3-221ENST00000560603 A0A087WZG4 1122 aa16.31■□□□□ 0.2
MARK3-221ENST00000560603 GLTPD2A6NH11 291 aa16.31■□□□□ 0.2
MARK3-221ENST00000560603 HTRA3P83110 453 aa16.31■□□□□ 0.2
MARK3-221ENST00000560603 RASSF7Q02833 373 aa16.31■□□□□ 0.2
MARK3-221ENST00000560603 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
MARK3-221ENST00000560603 C2CD5Q86YS7 1000 aa16.31■□□□□ 0.2
MARK3-221ENST00000560603 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
MARK3-221ENST00000560603 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
MARK3-221ENST00000560603 CANXP27824 592 aaKnown RBP16.3■□□□□ 0.2
MARK3-221ENST00000560603 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
MARK3-221ENST00000560603 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
MARK3-221ENST00000560603 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
MARK3-221ENST00000560603 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
MARK3-221ENST00000560603 NPM2Q86SE8 214 aaKnown RBP16.28■□□□□ 0.2
MARK3-221ENST00000560603 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
MARK3-221ENST00000560603 BCL2L12Q9HB09 334 aa16.28■□□□□ 0.2
MARK3-221ENST00000560603 EIF5P55010 431 aaKnown RBP16.27■□□□□ 0.2
MARK3-221ENST00000560603 TEFQ10587 303 aa16.27■□□□□ 0.2
MARK3-221ENST00000560603 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
MARK3-221ENST00000560603 PDE6BP35913 854 aa16.26■□□□□ 0.19
MARK3-221ENST00000560603 BRIP1Q9BX63 1249 aa16.26■□□□□ 0.19
MARK3-221ENST00000560603 DLEC1Q9Y238 1755 aa16.26■□□□□ 0.19
MARK3-221ENST00000560603 NFKBIEO00221 500 aa16.25■□□□□ 0.19
MARK3-221ENST00000560603 GAS2L2Q8NHY3 880 aa16.25■□□□□ 0.19
MARK3-221ENST00000560603 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.19
MARK3-221ENST00000560603 VIRMAQ69YN4 1812 aaKnown RBP16.24■□□□□ 0.19
MARK3-221ENST00000560603 NPHP1O15259 732 aa16.24■□□□□ 0.19
MARK3-221ENST00000560603 COL13A1Q5TAT6 717 aaPredicted RBP16.24■□□□□ 0.19
MARK3-221ENST00000560603 CCER1Q8TC90 406 aaPredicted RBP16.24■□□□□ 0.19
MARK3-221ENST00000560603 GNAT3A8MTJ3 354 aa16.23■□□□□ 0.19
MARK3-221ENST00000560603 IL6STP40189 918 aaPredicted RBP16.23■□□□□ 0.19
MARK3-221ENST00000560603 TBC1D9BQ66K14 1250 aa16.23■□□□□ 0.19
MARK3-221ENST00000560603 ZNF790Q6PG37 636 aa16.23■□□□□ 0.19
MARK3-221ENST00000560603 ZNF496Q96IT1 587 aaPredicted RBP16.23■□□□□ 0.19
MARK3-221ENST00000560603 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
MARK3-221ENST00000560603 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
MARK3-221ENST00000560603 HEG1Q9ULI3 1381 aa16.23■□□□□ 0.19
MARK3-221ENST00000560603 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
MARK3-221ENST00000560603 KIF7Q2M1P5 1343 aa16.22■□□□□ 0.19
MARK3-221ENST00000560603 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
MARK3-221ENST00000560603 PRELPP51888 382 aa16.22■□□□□ 0.19
MARK3-221ENST00000560603 ERFEQ4G0M1 354 aa16.22■□□□□ 0.19
MARK3-221ENST00000560603 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
MARK3-221ENST00000560603 TNS4Q8IZW8 715 aa16.22■□□□□ 0.19
MARK3-221ENST00000560603 FMNL2Q96PY5 1086 aa16.22■□□□□ 0.19
MARK3-221ENST00000560603 SETDB2Q96T68 719 aa16.22■□□□□ 0.19
MARK3-221ENST00000560603 C21orf2O43822 256 aa16.21■□□□□ 0.19
MARK3-221ENST00000560603 SOGA3Q5TF21 947 aa16.21■□□□□ 0.19
MARK3-221ENST00000560603 CNBD1Q8NA66 436 aa16.21■□□□□ 0.19
MARK3-221ENST00000560603 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
MARK3-221ENST00000560603 TBC1D2BQ9UPU7 963 aa16.21■□□□□ 0.19
MARK3-221ENST00000560603 CCDC88AQ3V6T2 1871 aa16.2■□□□□ 0.18
MARK3-221ENST00000560603 TIAM2Q8IVF5 1701 aa16.2■□□□□ 0.18
MARK3-221ENST00000560603 PER1O15534 1290 aaPredicted RBP16.2■□□□□ 0.18
MARK3-221ENST00000560603 ST5P78524 1137 aa16.2■□□□□ 0.18
MARK3-221ENST00000560603 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
MARK3-221ENST00000560603 IL17REQ8NFR9 667 aa16.2■□□□□ 0.18
MARK3-221ENST00000560603 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
MARK3-221ENST00000560603 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
MARK3-221ENST00000560603 TAOK3Q9H2K8 898 aa16.19■□□□□ 0.18
MARK3-221ENST00000560603 HSPA1AP0DMV8 641 aaKnown RBP16.18■□□□□ 0.18
MARK3-221ENST00000560603 HSPA1BP0DMV9 641 aaKnown RBP16.18■□□□□ 0.18
MARK3-221ENST00000560603 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
MARK3-221ENST00000560603 NPC1L1Q9UHC9 1359 aa16.17■□□□□ 0.18
MARK3-221ENST00000560603 POTECB2RU33 542 aa16.17■□□□□ 0.18
MARK3-221ENST00000560603 CAPN15O75808 1086 aa16.17■□□□□ 0.18
MARK3-221ENST00000560603 A1BGP04217 495 aa16.17■□□□□ 0.18
MARK3-221ENST00000560603 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
MARK3-221ENST00000560603 MASTLQ96GX5 879 aa16.17■□□□□ 0.18
MARK3-221ENST00000560603 SCN7AQ01118 1682 aa16.17■□□□□ 0.18
MARK3-221ENST00000560603 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
MARK3-221ENST00000560603 DICER1Q9UPY3 1922 aaKnown RBP16.16■□□□□ 0.18
MARK3-221ENST00000560603 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
MARK3-221ENST00000560603 CAMTA2O94983 1202 aa16.16■□□□□ 0.18
MARK3-221ENST00000560603 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
MARK3-221ENST00000560603 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
MARK3-221ENST00000560603 ZNF652Q9Y2D9 606 aa16.16■□□□□ 0.18
MARK3-221ENST00000560603 SRGNP10124 158 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms