RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 PCDH11YQ9BZA8 1340 aa23.63■■□□□ 1.37
HMBOX1-215ENST00000560599 LRRCC1Q9C099 1032 aa23.63■■□□□ 1.37
HMBOX1-215ENST00000560599 OSBPL3Q9H4L5 887 aa23.63■■□□□ 1.37
HMBOX1-215ENST00000560599 SMARCA5O60264 1052 aaPredicted RBP23.62■■□□□ 1.37
HMBOX1-215ENST00000560599 CASC1Q6TDU7 716 aa23.62■■□□□ 1.37
HMBOX1-215ENST00000560599 KSR2Q6VAB6 950 aa23.62■■□□□ 1.37
HMBOX1-215ENST00000560599 APBB1O00213 710 aa23.61■■□□□ 1.37
HMBOX1-215ENST00000560599 CYP27B1O15528 508 aa23.61■■□□□ 1.37
HMBOX1-215ENST00000560599 TTC5Q8N0Z6 440 aa23.61■■□□□ 1.37
HMBOX1-215ENST00000560599 SSH3Q8TE77 659 aa23.61■■□□□ 1.37
HMBOX1-215ENST00000560599 PNMA6EA0A0J9YXQ4 647 aa23.6■■□□□ 1.37
HMBOX1-215ENST00000560599 RAB11FIP3O75154 756 aa23.6■■□□□ 1.37
HMBOX1-215ENST00000560599 TOM1L2Q6ZVM7 507 aa23.6■■□□□ 1.37
HMBOX1-215ENST00000560599 C16orf71Q8IYS4 520 aaPredicted RBP23.6■■□□□ 1.37
HMBOX1-215ENST00000560599 EXOC6BQ9Y2D4 811 aa23.6■■□□□ 1.37
HMBOX1-215ENST00000560599 ANXA1P04083 346 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 POLA2Q14181 598 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 CARD10Q9BWT7 1032 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 GLI3P10071 1580 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 AOX1Q06278 1338 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 PAPPAQ13219 1627 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 OTUD7AQ8TE49 926 aaPredicted RBP23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 FMNL2Q96PY5 1086 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 TBC1D2Q9BYX2 928 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 MAP3K2Q9Y2U5 619 aa23.59■■□□□ 1.37
HMBOX1-215ENST00000560599 CABP4P57796 275 aa23.58■■□□□ 1.36
HMBOX1-215ENST00000560599 PROSER3Q2NL68 480 aa23.58■■□□□ 1.36
HMBOX1-215ENST00000560599 NFATC2IPQ8NCF5 419 aa23.58■■□□□ 1.36
HMBOX1-215ENST00000560599 SALL3Q9BXA9 1300 aa23.57■■□□□ 1.36
HMBOX1-215ENST00000560599 SNRPA1P09661 255 aaKnown RBP23.57■■□□□ 1.36
HMBOX1-215ENST00000560599 PDE1AP54750 535 aa23.57■■□□□ 1.36
HMBOX1-215ENST00000560599 SLC39A6Q13433 755 aa23.57■■□□□ 1.36
HMBOX1-215ENST00000560599 HSCBQ8IWL3 235 aa23.57■■□□□ 1.36
HMBOX1-215ENST00000560599 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
HMBOX1-215ENST00000560599 SHANK3Q9BYB0 1731 aa23.56■■□□□ 1.36
HMBOX1-215ENST00000560599 AHDC1Q5TGY3 1603 aaPredicted RBP23.56■■□□□ 1.36
HMBOX1-215ENST00000560599 TUBGCP6Q96RT7 1819 aa23.56■■□□□ 1.36
HMBOX1-215ENST00000560599 HSP90AB4PQ58FF6 505 aa23.56■■□□□ 1.36
HMBOX1-215ENST00000560599 PRAMEF22A3QJZ6 481 aa23.55■■□□□ 1.36
HMBOX1-215ENST00000560599 PPP1R42Q7Z4L9 355 aa23.55■■□□□ 1.36
HMBOX1-215ENST00000560599 LINS1Q8NG48 757 aa23.55■■□□□ 1.36
HMBOX1-215ENST00000560599 UBR2Q8IWV8 1755 aa23.55■■□□□ 1.36
HMBOX1-215ENST00000560599 COL14A1Q05707 1796 aaKnown RBP23.54■■□□□ 1.36
HMBOX1-215ENST00000560599 IL2RBP14784 551 aa23.54■■□□□ 1.36
HMBOX1-215ENST00000560599 SDSP20132 328 aa23.54■■□□□ 1.36
HMBOX1-215ENST00000560599 MTX1Q13505 466 aa23.54■■□□□ 1.36
HMBOX1-215ENST00000560599 SNX21Q969T3 373 aa23.54■■□□□ 1.36
HMBOX1-215ENST00000560599 ZNF496Q96IT1 587 aaPredicted RBP23.54■■□□□ 1.36
HMBOX1-215ENST00000560599 ERBB4Q15303 1308 aa23.54■■□□□ 1.36
HMBOX1-215ENST00000560599 COL22A1Q8NFW1 1626 aaPredicted RBP23.54■■□□□ 1.36
HMBOX1-215ENST00000560599 MX1P20591 662 aa23.53■■□□□ 1.36
HMBOX1-215ENST00000560599 PDIA6Q15084 440 aa23.53■■□□□ 1.36
HMBOX1-215ENST00000560599 LARP1Q6PKG0 1096 aaKnown RBP23.53■■□□□ 1.36
HMBOX1-215ENST00000560599 C9orf78Q9NZ63 289 aaPredicted RBP23.53■■□□□ 1.36
HMBOX1-215ENST00000560599 STAP2Q9UGK3 403 aa23.53■■□□□ 1.36
HMBOX1-215ENST00000560599 ERVV-2B6SEH9 535 aa23.52■■□□□ 1.36
HMBOX1-215ENST00000560599 SRGAP3O43295 1099 aa23.52■■□□□ 1.36
HMBOX1-215ENST00000560599 NBPF7P0C2Y1 421 aaPredicted RBP23.52■■□□□ 1.36
HMBOX1-215ENST00000560599 UTYO14607 1347 aa23.52■■□□□ 1.36
HMBOX1-215ENST00000560599 NKX1-1Q15270 411 aaPredicted RBP23.51■■□□□ 1.35
HMBOX1-215ENST00000560599 NEXNQ0ZGT2 675 aa23.5■■□□□ 1.35
HMBOX1-215ENST00000560599 KIF1BPQ96EK5 621 aa23.5■■□□□ 1.35
HMBOX1-215ENST00000560599 BCL11AQ9H165 835 aa23.5■■□□□ 1.35
HMBOX1-215ENST00000560599 ROBO1Q9Y6N7 1651 aa23.5■■□□□ 1.35
HMBOX1-215ENST00000560599 PLCH1Q4KWH8 1693 aa23.5■■□□□ 1.35
HMBOX1-215ENST00000560599 SURF6O75683 361 aaKnown RBP23.5■■□□□ 1.35
HMBOX1-215ENST00000560599 EVA1CP58658 441 aa23.5■■□□□ 1.35
HMBOX1-215ENST00000560599 RIC3Q7Z5B4 369 aa23.5■■□□□ 1.35
HMBOX1-215ENST00000560599 KCPQ6ZWJ8 1503 aa23.49■■□□□ 1.35
HMBOX1-215ENST00000560599 GRM8O00222 908 aa23.49■■□□□ 1.35
HMBOX1-215ENST00000560599 TNS2Q63HR2 1409 aa23.48■■□□□ 1.35
HMBOX1-215ENST00000560599 REC8O95072 547 aa23.48■■□□□ 1.35
HMBOX1-215ENST00000560599 NFKBIBQ15653 356 aa23.48■■□□□ 1.35
HMBOX1-215ENST00000560599 XAGE3Q8WTP9 111 aa23.48■■□□□ 1.35
HMBOX1-215ENST00000560599 ARFGEF2Q9Y6D5 1785 aa23.47■■□□□ 1.35
HMBOX1-215ENST00000560599 AIMP1Q12904 312 aaKnown RBP23.47■■□□□ 1.35
HMBOX1-215ENST00000560599 ERC1Q8IUD2 1116 aa23.47■■□□□ 1.35
HMBOX1-215ENST00000560599 STRN4Q9NRL3 753 aa23.47■■□□□ 1.35
HMBOX1-215ENST00000560599 RHPN1Q8TCX5 695 aa23.46■■□□□ 1.35
HMBOX1-215ENST00000560599 METTL22Q9BUU2 404 aaPredicted RBP23.46■■□□□ 1.35
HMBOX1-215ENST00000560599 ERC2O15083 957 aa23.45■■□□□ 1.34
HMBOX1-215ENST00000560599 MYL6BP14649 208 aa23.45■■□□□ 1.34
HMBOX1-215ENST00000560599 CWF19L2Q2TBE0 894 aaKnown RBP23.45■■□□□ 1.34
HMBOX1-215ENST00000560599 ANTXR1Q9H6X2 564 aa23.45■■□□□ 1.34
HMBOX1-215ENST00000560599 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
HMBOX1-215ENST00000560599 COL16A1Q07092 1604 aaPredicted RBP23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 OS9Q13438 667 aaPredicted RBP23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 RABEP1Q15276 862 aa23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 COPS6Q7L5N1 327 aa23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 LRP10Q7Z4F1 713 aa23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 KIF2CQ99661 725 aa23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 SLKQ9H2G2 1235 aaPredicted RBP23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 COL15A1P39059 1388 aa23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 AFDNP55196 1824 aaKnown RBP23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 USP42Q9H9J4 1324 aaKnown RBP23.43■■□□□ 1.34
HMBOX1-215ENST00000560599 NEURL1BA8MQ27 555 aa23.42■■□□□ 1.34
HMBOX1-215ENST00000560599 LRP6O75581 1613 aa23.42■■□□□ 1.34
HMBOX1-215ENST00000560599 WNK3Q9BYP7 1800 aa23.42■■□□□ 1.34
HMBOX1-215ENST00000560599 IGKV5-2P06315 115 aa23.42■■□□□ 1.34
HMBOX1-215ENST00000560599 SUCLG2Q96I99 432 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms