RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 HEG1Q9ULI3 1381 aa18.71■□□□□ 0.59
TNFAIP2-207ENST00000560562 KDM3BQ7LBC6 1761 aa18.7■□□□□ 0.58
TNFAIP2-207ENST00000560562 SCN7AQ01118 1682 aa18.7■□□□□ 0.58
TNFAIP2-207ENST00000560562 NRXN2Q9P2S2 1712 aa18.7■□□□□ 0.58
TNFAIP2-207ENST00000560562 COL15A1P39059 1388 aa18.69■□□□□ 0.58
TNFAIP2-207ENST00000560562 DDR1Q08345 913 aa18.69■□□□□ 0.58
TNFAIP2-207ENST00000560562 TTC5Q8N0Z6 440 aa18.69■□□□□ 0.58
TNFAIP2-207ENST00000560562 PLEKHF1Q96S99 279 aa18.68■□□□□ 0.58
TNFAIP2-207ENST00000560562 ZNF784Q8NCA9 323 aaPredicted RBP18.67■□□□□ 0.58
TNFAIP2-207ENST00000560562 BCORQ6W2J9 1755 aa18.67■□□□□ 0.58
TNFAIP2-207ENST00000560562 USPL1Q5W0Q7 1092 aa18.66■□□□□ 0.58
TNFAIP2-207ENST00000560562 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
TNFAIP2-207ENST00000560562 LAMB4A4D0S4 1761 aa18.66■□□□□ 0.58
TNFAIP2-207ENST00000560562 BTBD11A6QL63 1104 aa18.66■□□□□ 0.58
TNFAIP2-207ENST00000560562 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
TNFAIP2-207ENST00000560562 ARFGEF1Q9Y6D6 1849 aa18.65■□□□□ 0.58
TNFAIP2-207ENST00000560562 PRAMEF22A3QJZ6 481 aa18.65■□□□□ 0.58
TNFAIP2-207ENST00000560562 RALBP1Q15311 655 aa18.65■□□□□ 0.58
TNFAIP2-207ENST00000560562 TM4SF1P30408 202 aa18.64■□□□□ 0.57
TNFAIP2-207ENST00000560562 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.57
TNFAIP2-207ENST00000560562 FMNL2Q96PY5 1086 aa18.64■□□□□ 0.57
TNFAIP2-207ENST00000560562 NARFQ9UHQ1 456 aa18.64■□□□□ 0.57
TNFAIP2-207ENST00000560562 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.57
TNFAIP2-207ENST00000560562 ANKRD31Q8N7Z5 1873 aa18.64■□□□□ 0.57
TNFAIP2-207ENST00000560562 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
TNFAIP2-207ENST00000560562 POLRMTO00411 1230 aaKnown RBP18.63■□□□□ 0.57
TNFAIP2-207ENST00000560562 GRIN3BO60391 1043 aa18.63■□□□□ 0.57
TNFAIP2-207ENST00000560562 RTF1Q92541 710 aaKnown RBP18.63■□□□□ 0.57
TNFAIP2-207ENST00000560562 A0A0G2JLW4 131 aa18.62■□□□□ 0.57
TNFAIP2-207ENST00000560562 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
TNFAIP2-207ENST00000560562 ZPR1O75312 459 aa18.62■□□□□ 0.57
TNFAIP2-207ENST00000560562 STARD3NLO95772 234 aa18.62■□□□□ 0.57
TNFAIP2-207ENST00000560562 A1BGP04217 495 aa18.62■□□□□ 0.57
TNFAIP2-207ENST00000560562 DPEP1P16444 411 aa18.61■□□□□ 0.57
TNFAIP2-207ENST00000560562 NFIXQ14938 502 aa18.61■□□□□ 0.57
TNFAIP2-207ENST00000560562 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
TNFAIP2-207ENST00000560562 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
TNFAIP2-207ENST00000560562 USP16Q9Y5T5 823 aa18.61■□□□□ 0.57
TNFAIP2-207ENST00000560562 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
TNFAIP2-207ENST00000560562 KCNA3P22001 575 aa18.6■□□□□ 0.57
TNFAIP2-207ENST00000560562 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
TNFAIP2-207ENST00000560562 NFE2L2Q16236 605 aa18.6■□□□□ 0.57
TNFAIP2-207ENST00000560562 TGFB2P61812 414 aa18.59■□□□□ 0.57
TNFAIP2-207ENST00000560562 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.57
TNFAIP2-207ENST00000560562 COL11A2P13942 1736 aaPredicted RBP18.58■□□□□ 0.56
TNFAIP2-207ENST00000560562 ADCY9O60503 1353 aa18.58■□□□□ 0.56
TNFAIP2-207ENST00000560562 CARMIL3Q8ND23 1372 aa18.58■□□□□ 0.56
TNFAIP2-207ENST00000560562 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
TNFAIP2-207ENST00000560562 TBC1D2BQ9UPU7 963 aa18.57■□□□□ 0.56
TNFAIP2-207ENST00000560562 ZNF330Q9Y3S2 320 aaPredicted RBP18.57■□□□□ 0.56
TNFAIP2-207ENST00000560562 IL6STP40189 918 aaPredicted RBP18.57■□□□□ 0.56
TNFAIP2-207ENST00000560562 SBF1O95248 1867 aa18.56■□□□□ 0.56
TNFAIP2-207ENST00000560562 CHRNA5P30532 468 aa18.56■□□□□ 0.56
TNFAIP2-207ENST00000560562 NBPF26B4DH59 902 aa18.55■□□□□ 0.56
TNFAIP2-207ENST00000560562 SNRPA1P09661 255 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-207ENST00000560562 TBC1D9BQ66K14 1250 aa18.55■□□□□ 0.56
TNFAIP2-207ENST00000560562 NBPF10Q6P3W6 841 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-207ENST00000560562 NBPF15Q8N660 670 aa18.55■□□□□ 0.56
TNFAIP2-207ENST00000560562 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
TNFAIP2-207ENST00000560562 BCS1LQ9Y276 419 aa18.55■□□□□ 0.56
TNFAIP2-207ENST00000560562 MAPK8IP3Q9UPT6 1336 aa18.55■□□□□ 0.56
TNFAIP2-207ENST00000560562 CACNA1SQ13698 1873 aa18.54■□□□□ 0.56
TNFAIP2-207ENST00000560562 ATP10DQ9P241 1426 aa18.54■□□□□ 0.56
TNFAIP2-207ENST00000560562 CAMTA2O94983 1202 aa18.54■□□□□ 0.56
TNFAIP2-207ENST00000560562 NEFMP07197 916 aa18.54■□□□□ 0.56
TNFAIP2-207ENST00000560562 BICDL1Q6ZP65 573 aa18.54■□□□□ 0.56
TNFAIP2-207ENST00000560562 NUP98P52948 1817 aa18.53■□□□□ 0.56
TNFAIP2-207ENST00000560562 A0A087WZG4 1122 aa18.53■□□□□ 0.56
TNFAIP2-207ENST00000560562 SERPINB2P05120 415 aa18.53■□□□□ 0.56
TNFAIP2-207ENST00000560562 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
TNFAIP2-207ENST00000560562 CCDC88AQ3V6T2 1871 aa18.51■□□□□ 0.55
TNFAIP2-207ENST00000560562 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
TNFAIP2-207ENST00000560562 TMPOP42166 694 aaKnown RBP18.5■□□□□ 0.55
TNFAIP2-207ENST00000560562 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
TNFAIP2-207ENST00000560562 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
TNFAIP2-207ENST00000560562 PNNQ9H307 717 aaKnown RBP18.5■□□□□ 0.55
TNFAIP2-207ENST00000560562 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
TNFAIP2-207ENST00000560562 RIPK4P57078 832 aa18.49■□□□□ 0.55
TNFAIP2-207ENST00000560562 CCDC24Q8N4L8 307 aa18.49■□□□□ 0.55
TNFAIP2-207ENST00000560562 PIM2Q9P1W9 311 aa18.49■□□□□ 0.55
TNFAIP2-207ENST00000560562 PRR5LQ6MZQ0 368 aa18.48■□□□□ 0.55
TNFAIP2-207ENST00000560562 PNISRQ8TF01 805 aaKnown RBP18.48■□□□□ 0.55
TNFAIP2-207ENST00000560562 ADAMTS8Q9UP79 889 aa18.48■□□□□ 0.55
TNFAIP2-207ENST00000560562 ARFGEF2Q9Y6D5 1785 aa18.47■□□□□ 0.55
TNFAIP2-207ENST00000560562 CEP350Q5VT06 3117 aa18.47■□□□□ 0.55
TNFAIP2-207ENST00000560562 DALRD3Q5D0E6 543 aaKnown RBP18.47■□□□□ 0.55
TNFAIP2-207ENST00000560562 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
TNFAIP2-207ENST00000560562 ARHGAP27Q6ZUM4 889 aa18.46■□□□□ 0.55
TNFAIP2-207ENST00000560562 NEUROD2Q15784 382 aa18.45■□□□□ 0.54
TNFAIP2-207ENST00000560562 TRIM35Q9UPQ4 493 aa18.45■□□□□ 0.54
TNFAIP2-207ENST00000560562 TNRC6CQ9HCJ0 1690 aaKnown RBP18.44■□□□□ 0.54
TNFAIP2-207ENST00000560562 FER1L6Q2WGJ9 1857 aa18.44■□□□□ 0.54
TNFAIP2-207ENST00000560562 WDR43Q15061 677 aaKnown RBP eCLIP18.44■□□□□ 0.54
TNFAIP2-207ENST00000560562 HLFQ16534 295 aa18.44■□□□□ 0.54
TNFAIP2-207ENST00000560562 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
TNFAIP2-207ENST00000560562 ZNF526Q8TF50 670 aaPredicted RBP18.44■□□□□ 0.54
TNFAIP2-207ENST00000560562 RUNDC1Q96C34 613 aa18.44■□□□□ 0.54
TNFAIP2-207ENST00000560562 TSPYL4Q9UJ04 414 aa18.44■□□□□ 0.54
TNFAIP2-207ENST00000560562 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
TNFAIP2-207ENST00000560562 NPM2Q86SE8 214 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms