RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 TMEM229AB2RXF0 380 aa8□□□□□ -1.13
LRRC28-218ENST00000560236 PIK3CDO00329 1044 aa8□□□□□ -1.13
LRRC28-218ENST00000560236 CDK2AP1O14519 115 aa8□□□□□ -1.13
LRRC28-218ENST00000560236 ATXN7O15265 892 aaPredicted RBP8□□□□□ -1.13
LRRC28-218ENST00000560236 ARAFP10398 606 aa8□□□□□ -1.13
LRRC28-218ENST00000560236 TATP17735 454 aaPredicted RBP8□□□□□ -1.13
LRRC28-218ENST00000560236 PROCP04070 461 aa7.99□□□□□ -1.13
LRRC28-218ENST00000560236 EPXP11678 715 aa7.99□□□□□ -1.13
LRRC28-218ENST00000560236 MTFR1Q15390 333 aa7.99□□□□□ -1.13
LRRC28-218ENST00000560236 EML3Q32P44 896 aa7.99□□□□□ -1.13
LRRC28-218ENST00000560236 ALYREFQ86V81 257 aaKnown RBP7.99□□□□□ -1.13
LRRC28-218ENST00000560236 CABP1Q9NZU7 370 aa7.99□□□□□ -1.13
LRRC28-218ENST00000560236 IQSEC3Q9UPP2 1182 aaPredicted RBP7.99□□□□□ -1.13
LRRC28-218ENST00000560236 COG6Q9Y2V7 657 aa7.99□□□□□ -1.13
LRRC28-218ENST00000560236 PCDHGA11Q9Y5H2 935 aa7.99□□□□□ -1.13
LRRC28-218ENST00000560236 DCDC2BA2VCK2 349 aa7.98□□□□□ -1.13
LRRC28-218ENST00000560236 KRBA1A5PL33 1030 aa7.98□□□□□ -1.13
LRRC28-218ENST00000560236 NEURL1BA8MQ27 555 aa7.98□□□□□ -1.13
LRRC28-218ENST00000560236 SKIP12755 728 aa7.98□□□□□ -1.13
LRRC28-218ENST00000560236 ZNF295-AS1Q8N0V1 137 aa7.98□□□□□ -1.13
LRRC28-218ENST00000560236 BTBD6Q96KE9 485 aa7.98□□□□□ -1.13
LRRC28-218ENST00000560236 ZDHHC3Q9NYG2 299 aa7.98□□□□□ -1.13
LRRC28-218ENST00000560236 PIK3R2O00459 728 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 BACH1O14867 736 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 MAPTP10636 758 aaKnown RBP7.97□□□□□ -1.13
LRRC28-218ENST00000560236 HOXB4P17483 251 aaPredicted RBP7.97□□□□□ -1.13
LRRC28-218ENST00000560236 CD33P20138 364 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 COL8A1P27658 744 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 TNP2Q05952 138 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 PSME1Q06323 249 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 LINC00114Q6XXX2 140 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 WWC1Q8IX03 1113 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 NOD1Q9Y239 953 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 GJA3Q9Y6H8 435 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 USP3Q9Y6I4 520 aa7.97□□□□□ -1.13
LRRC28-218ENST00000560236 GNB5O14775 395 aa7.96□□□□□ -1.14
LRRC28-218ENST00000560236 KHNYNO15037 678 aaKnown RBP7.96□□□□□ -1.14
LRRC28-218ENST00000560236 ADAM23O75077 832 aa7.96□□□□□ -1.14
LRRC28-218ENST00000560236 ADH6P28332 368 aa7.96□□□□□ -1.14
LRRC28-218ENST00000560236 GRIN2CQ14957 1233 aa7.96□□□□□ -1.14
LRRC28-218ENST00000560236 ZIC5Q96T25 663 aa7.96□□□□□ -1.14
LRRC28-218ENST00000560236 LZTS3O60299 673 aaPredicted RBP7.95□□□□□ -1.14
LRRC28-218ENST00000560236 GTF2IP78347 998 aa7.95□□□□□ -1.14
LRRC28-218ENST00000560236 FAM182BQ5T319 152 aa7.95□□□□□ -1.14
LRRC28-218ENST00000560236 BICDL1Q6ZP65 573 aa7.95□□□□□ -1.14
LRRC28-218ENST00000560236 NFATC2IPQ8NCF5 419 aa7.95□□□□□ -1.14
LRRC28-218ENST00000560236 ALG2Q9H553 416 aa7.95□□□□□ -1.14
LRRC28-218ENST00000560236 SUV39H2Q9H5I1 410 aa7.95□□□□□ -1.14
LRRC28-218ENST00000560236 PARP3Q9Y6F1 533 aa7.95□□□□□ -1.14
LRRC28-218ENST00000560236 NCOA4Q13772 614 aa7.94□□□□□ -1.14
LRRC28-218ENST00000560236 AVENQ9NQS1 362 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-218ENST00000560236 SCHIP1Q9P0W5 487 aaPredicted RBP7.94□□□□□ -1.14
LRRC28-218ENST00000560236 HCN2Q9UL51 889 aa7.94□□□□□ -1.14
LRRC28-218ENST00000560236 FAM157BP0CG42 384 aa7.93□□□□□ -1.14
LRRC28-218ENST00000560236 DGKGP49619 791 aa7.93□□□□□ -1.14
LRRC28-218ENST00000560236 CHSY3Q70JA7 882 aa7.93□□□□□ -1.14
LRRC28-218ENST00000560236 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.93□□□□□ -1.14
LRRC28-218ENST00000560236 ZNF358Q9NW07 568 aa7.93□□□□□ -1.14
LRRC28-218ENST00000560236 KLF15Q9UIH9 416 aa7.93□□□□□ -1.14
LRRC28-218ENST00000560236 PRR12Q9ULL5 1215 aa7.93□□□□□ -1.14
LRRC28-218ENST00000560236 SAMD5Q5TGI4 173 aa7.92□□□□□ -1.14
LRRC28-218ENST00000560236 DEPDC4Q8N2C3 294 aa7.92□□□□□ -1.14
LRRC28-218ENST00000560236 L3MBTL2Q969R5 705 aa7.92□□□□□ -1.14
LRRC28-218ENST00000560236 NOP53Q9NZM5 478 aaKnown RBP7.92□□□□□ -1.14
LRRC28-218ENST00000560236 USP17L5A8MUK1 530 aa7.91□□□□□ -1.14
LRRC28-218ENST00000560236 RAD21O60216 631 aa7.91□□□□□ -1.14
LRRC28-218ENST00000560236 TXLNAP40222 546 aa7.91□□□□□ -1.14
LRRC28-218ENST00000560236 BAG6P46379 1132 aa7.91□□□□□ -1.14
LRRC28-218ENST00000560236 PCBP4P57723 403 aaKnown RBP7.91□□□□□ -1.14
LRRC28-218ENST00000560236 ZNF468Q5VIY5 522 aaPredicted RBP7.91□□□□□ -1.14
LRRC28-218ENST00000560236 FCHSD1Q86WN1 690 aa7.91□□□□□ -1.14
LRRC28-218ENST00000560236 POM121Q96HA1 1249 aa7.91□□□□□ -1.14
LRRC28-218ENST00000560236 MARK1Q9P0L2 795 aa7.91□□□□□ -1.14
LRRC28-218ENST00000560236 K7ELQ4 463 aaPredicted RBP7.9□□□□□ -1.14
LRRC28-218ENST00000560236 NOS2P35228 1153 aa7.9□□□□□ -1.14
LRRC28-218ENST00000560236 LAMC2Q13753 1193 aa7.9□□□□□ -1.14
LRRC28-218ENST00000560236 TEAD4Q15561 434 aa7.9□□□□□ -1.14
LRRC28-218ENST00000560236 ZDHHC1Q8WTX9 485 aa7.9□□□□□ -1.14
LRRC28-218ENST00000560236 STRN4Q9NRL3 753 aa7.9□□□□□ -1.14
LRRC28-218ENST00000560236 ZNF232Q9UNY5 417 aa7.9□□□□□ -1.14
LRRC28-218ENST00000560236 EFSO43281 561 aa7.89□□□□□ -1.15
LRRC28-218ENST00000560236 TBCELQ5QJ74 424 aa7.89□□□□□ -1.15
LRRC28-218ENST00000560236 LRRC69Q6ZNQ3 347 aa7.89□□□□□ -1.15
LRRC28-218ENST00000560236 TRIM50Q86XT4 487 aa7.89□□□□□ -1.15
LRRC28-218ENST00000560236 SLC9A9Q8IVB4 645 aa7.89□□□□□ -1.15
LRRC28-218ENST00000560236 TNS4Q8IZW8 715 aa7.89□□□□□ -1.15
LRRC28-218ENST00000560236 NEUROD4Q9HD90 331 aa7.89□□□□□ -1.15
LRRC28-218ENST00000560236 C1QTNF9BB2RNN3 333 aa7.88□□□□□ -1.15
LRRC28-218ENST00000560236 PRKCSHP14314 528 aaPredicted RBP7.88□□□□□ -1.15
LRRC28-218ENST00000560236 EPHA4P54764 986 aa7.88□□□□□ -1.15
LRRC28-218ENST00000560236 SERTM1A2A2V5 107 aa7.87□□□□□ -1.15
LRRC28-218ENST00000560236 FURINP09958 794 aa7.87□□□□□ -1.15
LRRC28-218ENST00000560236 TPCN2Q8NHX9 752 aa7.87□□□□□ -1.15
LRRC28-218ENST00000560236 POM121CA8CG34 1229 aa7.86□□□□□ -1.15
LRRC28-218ENST00000560236 EML1O00423 815 aa7.86□□□□□ -1.15
LRRC28-218ENST00000560236 UBTFP17480 764 aaKnown RBP7.86□□□□□ -1.15
LRRC28-218ENST00000560236 ALAS2P22557 587 aa7.86□□□□□ -1.15
LRRC28-218ENST00000560236 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
LRRC28-218ENST00000560236 SYT9Q86SS6 491 aa7.86□□□□□ -1.15
LRRC28-218ENST00000560236 CD163Q86VB7 1156 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms