RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 SNRPA1P09661 255 aaKnown RBP22.02■■□□□ 1.12
RPL28-209ENST00000560055 SLC16A10Q8TF71 515 aa22.02■■□□□ 1.12
RPL28-209ENST00000560055 CCDC87Q9NVE4 849 aa22.02■■□□□ 1.12
RPL28-209ENST00000560055 RTCBQ9Y3I0 505 aaKnown RBP22.02■■□□□ 1.12
RPL28-209ENST00000560055 SENP3-EIF4A1A0A087X0R7 540 aa22.01■■□□□ 1.11
RPL28-209ENST00000560055 PRAMEF22A3QJZ6 481 aa22.01■■□□□ 1.11
RPL28-209ENST00000560055 STARD3NLO95772 234 aa22.01■■□□□ 1.11
RPL28-209ENST00000560055 ZNF853P0CG23 659 aa22.01■■□□□ 1.11
RPL28-209ENST00000560055 WWC1Q8IX03 1113 aa22.01■■□□□ 1.11
RPL28-209ENST00000560055 CFAP44Q96MT7 982 aa22.01■■□□□ 1.11
RPL28-209ENST00000560055 MTFR1LQ9H019 292 aa22.01■■□□□ 1.11
RPL28-209ENST00000560055 PHF14O94880 888 aa22■■□□□ 1.11
RPL28-209ENST00000560055 ADRA2BP18089 450 aa22■■□□□ 1.11
RPL28-209ENST00000560055 CALD1Q05682 793 aaKnown RBP22■■□□□ 1.11
RPL28-209ENST00000560055 ZBTB1Q9Y2K1 713 aa22■■□□□ 1.11
RPL28-209ENST00000560055 USP16Q9Y5T5 823 aa22■■□□□ 1.11
RPL28-209ENST00000560055 GIGYF1O75420 1035 aaPredicted RBP21.99■■□□□ 1.11
RPL28-209ENST00000560055 SGIP1Q9BQI5 828 aa21.99■■□□□ 1.11
RPL28-209ENST00000560055 IFT57Q9NWB7 429 aa21.99■■□□□ 1.11
RPL28-209ENST00000560055 SOS1Q07889 1333 aaPredicted RBP21.99■■□□□ 1.11
RPL28-209ENST00000560055 NGEFQ8N5V2 710 aa21.98■■□□□ 1.11
RPL28-209ENST00000560055 TRAPPC3LQ5T215 181 aa21.97■■□□□ 1.11
RPL28-209ENST00000560055 ARHGEF1Q92888 912 aaKnown RBP21.97■■□□□ 1.11
RPL28-209ENST00000560055 COL24A1Q17RW2 1714 aa21.97■■□□□ 1.11
RPL28-209ENST00000560055 MBIPQ9NS73 344 aa21.96■■□□□ 1.11
RPL28-209ENST00000560055 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
RPL28-209ENST00000560055 LAMB4A4D0S4 1761 aa21.95■■□□□ 1.1
RPL28-209ENST00000560055 MSH5O43196 834 aa21.95■■□□□ 1.1
RPL28-209ENST00000560055 A1BGP04217 495 aa21.95■■□□□ 1.1
RPL28-209ENST00000560055 GNAI1P63096 354 aa21.95■■□□□ 1.1
RPL28-209ENST00000560055 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
RPL28-209ENST00000560055 EIF5P55010 431 aaKnown RBP21.94■■□□□ 1.1
RPL28-209ENST00000560055 FHDC1Q9C0D6 1143 aaPredicted RBP21.94■■□□□ 1.1
RPL28-209ENST00000560055 IL16Q14005 1332 aa21.94■■□□□ 1.1
RPL28-209ENST00000560055 CANXP27824 592 aaKnown RBP21.93■■□□□ 1.1
RPL28-209ENST00000560055 COL15A1P39059 1388 aa21.93■■□□□ 1.1
RPL28-209ENST00000560055 IL6STP40189 918 aaPredicted RBP21.93■■□□□ 1.1
RPL28-209ENST00000560055 SALL2Q9Y467 1007 aaPredicted RBP21.93■■□□□ 1.1
RPL28-209ENST00000560055 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
RPL28-209ENST00000560055 RFC4P35249 363 aa21.92■■□□□ 1.1
RPL28-209ENST00000560055 KRT24Q2M2I5 525 aa21.92■■□□□ 1.1
RPL28-209ENST00000560055 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
RPL28-209ENST00000560055 USP42Q9H9J4 1324 aaKnown RBP21.91■■□□□ 1.1
RPL28-209ENST00000560055 NBPF26B4DH59 902 aa21.91■■□□□ 1.1
RPL28-209ENST00000560055 NBPF10Q6P3W6 841 aaKnown RBP21.91■■□□□ 1.1
RPL28-209ENST00000560055 NBPF15Q8N660 670 aa21.91■■□□□ 1.1
RPL28-209ENST00000560055 SYT17Q9BSW7 474 aa21.91■■□□□ 1.1
RPL28-209ENST00000560055 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
RPL28-209ENST00000560055 ARXQ96QS3 562 aa21.9■■□□□ 1.1
RPL28-209ENST00000560055 HOXB7P09629 217 aa21.89■■□□□ 1.09
RPL28-209ENST00000560055 GYS1P13807 737 aa21.89■■□□□ 1.09
RPL28-209ENST00000560055 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
RPL28-209ENST00000560055 SRP68Q9UHB9 627 aaKnown RBP21.88■■□□□ 1.09
RPL28-209ENST00000560055 NARFQ9UHQ1 456 aa21.88■■□□□ 1.09
RPL28-209ENST00000560055 ERBB4Q15303 1308 aa21.87■■□□□ 1.09
RPL28-209ENST00000560055 A0A087WZG4 1122 aa21.87■■□□□ 1.09
RPL28-209ENST00000560055 TSR2Q969E8 191 aaKnown RBP21.86■■□□□ 1.09
RPL28-209ENST00000560055 UTRNP46939 3433 aa21.85■■□□□ 1.09
RPL28-209ENST00000560055 DCAF8L1A6NGE4 600 aa21.85■■□□□ 1.09
RPL28-209ENST00000560055 POLD1P28340 1107 aa21.85■■□□□ 1.09
RPL28-209ENST00000560055 PDIA6Q15084 440 aa21.85■■□□□ 1.09
RPL28-209ENST00000560055 DUSP27Q5VZP5 1158 aa21.85■■□□□ 1.09
RPL28-209ENST00000560055 LRP10Q7Z4F1 713 aa21.85■■□□□ 1.09
RPL28-209ENST00000560055 NLGN1Q8N2Q7 840 aa21.85■■□□□ 1.09
RPL28-209ENST00000560055 BCL2L12Q9HB09 334 aa21.85■■□□□ 1.09
RPL28-209ENST00000560055 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
RPL28-209ENST00000560055 GOLGB1Q14789 3259 aaKnown RBP21.84■■□□□ 1.09
RPL28-209ENST00000560055 ZPR1O75312 459 aa21.84■■□□□ 1.09
RPL28-209ENST00000560055 YY1P25490 414 aa21.84■■□□□ 1.09
RPL28-209ENST00000560055 FKBP8Q14318 412 aa21.84■■□□□ 1.09
RPL28-209ENST00000560055 USPL1Q5W0Q7 1092 aa21.84■■□□□ 1.09
RPL28-209ENST00000560055 ZNF330Q9Y3S2 320 aaPredicted RBP21.84■■□□□ 1.09
RPL28-209ENST00000560055 FANCIQ9NVI1 1328 aa21.83■■□□□ 1.09
RPL28-209ENST00000560055 EIF2S2P20042 333 aaKnown RBP21.83■■□□□ 1.09
RPL28-209ENST00000560055 C8orf58Q8NAV2 365 aa21.83■■□□□ 1.09
RPL28-209ENST00000560055 TBC1D2BQ9UPU7 963 aa21.83■■□□□ 1.09
RPL28-209ENST00000560055 SCN7AQ01118 1682 aa21.82■■□□□ 1.08
RPL28-209ENST00000560055 CAMTA2O94983 1202 aa21.82■■□□□ 1.08
RPL28-209ENST00000560055 KLHL34Q8N239 644 aa21.82■■□□□ 1.08
RPL28-209ENST00000560055 MMP10P09238 476 aa21.81■■□□□ 1.08
RPL28-209ENST00000560055 PROSER3Q2NL68 480 aa21.81■■□□□ 1.08
RPL28-209ENST00000560055 HDGFL1Q5TGJ6 251 aa21.81■■□□□ 1.08
RPL28-209ENST00000560055 DZIP3Q86Y13 1208 aaKnown RBP21.81■■□□□ 1.08
RPL28-209ENST00000560055 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
RPL28-209ENST00000560055 TSPYL6Q8N831 410 aa21.8■■□□□ 1.08
RPL28-209ENST00000560055 RGL2O15211 777 aa21.79■■□□□ 1.08
RPL28-209ENST00000560055 MYL6BP14649 208 aa21.79■■□□□ 1.08
RPL28-209ENST00000560055 TM4SF1P30408 202 aa21.79■■□□□ 1.08
RPL28-209ENST00000560055 NECTIN2Q92692 538 aa21.79■■□□□ 1.08
RPL28-209ENST00000560055 MYH16Q9H6N6 1097 aa21.79■■□□□ 1.08
RPL28-209ENST00000560055 DDX21Q9NR30 783 aaKnown RBP eCLIP21.79■■□□□ 1.08
RPL28-209ENST00000560055 BCORQ6W2J9 1755 aa21.79■■□□□ 1.08
RPL28-209ENST00000560055 ELL2O00472 640 aaPredicted RBP21.78■■□□□ 1.08
RPL28-209ENST00000560055 GOLGA2Q08379 1002 aa21.78■■□□□ 1.08
RPL28-209ENST00000560055 ANXA1P04083 346 aa21.77■■□□□ 1.08
RPL28-209ENST00000560055 DDR1Q08345 913 aa21.77■■□□□ 1.08
RPL28-209ENST00000560055 CHPF2Q9P2E5 772 aa21.77■■□□□ 1.08
RPL28-209ENST00000560055 NFIXQ14938 502 aa21.76■■□□□ 1.07
RPL28-209ENST00000560055 CLEC4GQ6UXB4 293 aa21.76■■□□□ 1.07
RPL28-209ENST00000560055 TTLL7Q6ZT98 887 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms