RNA–Protein interactions for RNA: ENST00000560054.5

AC104041.1-201, humanhuman

TSL 5 BASIC

Gene AC104041.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-201ENST00000560054 HEG1Q9ULI3 1381 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 KCNQ3O43525 872 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 ZPR1O75312 459 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 TM4SF1P30408 202 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 TGFB2P61812 414 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 RALBP1Q15311 655 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 USPL1Q5W0Q7 1092 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.33
AC104041.1-201ENST00000560054 UBR2Q8IWV8 1755 aa12.96□□□□□ -0.34
AC104041.1-201ENST00000560054 C4AP0C0L4 1744 aa12.96□□□□□ -0.34
AC104041.1-201ENST00000560054 CHD4Q14839 1912 aa12.96□□□□□ -0.34
AC104041.1-201ENST00000560054 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
AC104041.1-201ENST00000560054 DDR1Q08345 913 aa12.95□□□□□ -0.34
AC104041.1-201ENST00000560054 DCTN1Q14203 1278 aa12.95□□□□□ -0.34
AC104041.1-201ENST00000560054 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
AC104041.1-201ENST00000560054 PLEKHF1Q96S99 279 aa12.95□□□□□ -0.34
AC104041.1-201ENST00000560054 NARFQ9UHQ1 456 aa12.95□□□□□ -0.34
AC104041.1-201ENST00000560054 C10orf71Q711Q0 1435 aa12.95□□□□□ -0.34
AC104041.1-201ENST00000560054 COL15A1P39059 1388 aa12.94□□□□□ -0.34
AC104041.1-201ENST00000560054 SIPA1L3O60292 1781 aaPredicted RBP12.94□□□□□ -0.34
AC104041.1-201ENST00000560054 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
AC104041.1-201ENST00000560054 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
AC104041.1-201ENST00000560054 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
AC104041.1-201ENST00000560054 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
AC104041.1-201ENST00000560054 NEFMP07197 916 aa12.93□□□□□ -0.34
AC104041.1-201ENST00000560054 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
AC104041.1-201ENST00000560054 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
AC104041.1-201ENST00000560054 A0A087WZG4 1122 aa12.92□□□□□ -0.34
AC104041.1-201ENST00000560054 DPEP1P16444 411 aa12.92□□□□□ -0.34
AC104041.1-201ENST00000560054 NFIXQ14938 502 aa12.92□□□□□ -0.34
AC104041.1-201ENST00000560054 UTRNP46939 3433 aa12.91□□□□□ -0.34
AC104041.1-201ENST00000560054 A1BGP04217 495 aa12.91□□□□□ -0.34
AC104041.1-201ENST00000560054 KCNA3P22001 575 aa12.91□□□□□ -0.34
AC104041.1-201ENST00000560054 IL6STP40189 918 aaPredicted RBP12.91□□□□□ -0.34
AC104041.1-201ENST00000560054 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
AC104041.1-201ENST00000560054 PNNQ9H307 717 aaKnown RBP12.91□□□□□ -0.34
AC104041.1-201ENST00000560054 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
AC104041.1-201ENST00000560054 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.34
AC104041.1-201ENST00000560054 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
AC104041.1-201ENST00000560054 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
AC104041.1-201ENST00000560054 KIAA1551Q9HCM1 1747 aa12.9□□□□□ -0.34
AC104041.1-201ENST00000560054 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
AC104041.1-201ENST00000560054 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
AC104041.1-201ENST00000560054 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
AC104041.1-201ENST00000560054 BCS1LQ9Y276 419 aa12.89□□□□□ -0.35
AC104041.1-201ENST00000560054 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
AC104041.1-201ENST00000560054 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
AC104041.1-201ENST00000560054 SERPINB2P05120 415 aa12.88□□□□□ -0.35
AC104041.1-201ENST00000560054 THUMPD2Q9BTF0 503 aaKnown RBP12.88□□□□□ -0.35
AC104041.1-201ENST00000560054 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
AC104041.1-201ENST00000560054 N4BP2Q86UW6 1770 aaPredicted RBP12.88□□□□□ -0.35
AC104041.1-201ENST00000560054 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
AC104041.1-201ENST00000560054 CHRNA5P30532 468 aa12.87□□□□□ -0.35
AC104041.1-201ENST00000560054 TBC1D9BQ66K14 1250 aa12.87□□□□□ -0.35
AC104041.1-201ENST00000560054 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
AC104041.1-201ENST00000560054 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
AC104041.1-201ENST00000560054 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
AC104041.1-201ENST00000560054 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
AC104041.1-201ENST00000560054 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
AC104041.1-201ENST00000560054 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
AC104041.1-201ENST00000560054 NBPF10Q6P3W6 841 aaKnown RBP12.86□□□□□ -0.35
AC104041.1-201ENST00000560054 NPM2Q86SE8 214 aaKnown RBP12.86□□□□□ -0.35
AC104041.1-201ENST00000560054 NBPF15Q8N660 670 aa12.86□□□□□ -0.35
AC104041.1-201ENST00000560054 GOLGB1Q14789 3259 aaKnown RBP12.86□□□□□ -0.35
AC104041.1-201ENST00000560054 ADCY9O60503 1353 aa12.85□□□□□ -0.35
AC104041.1-201ENST00000560054 RIPK4P57078 832 aa12.85□□□□□ -0.35
AC104041.1-201ENST00000560054 DALRD3Q5D0E6 543 aaKnown RBP12.85□□□□□ -0.35
AC104041.1-201ENST00000560054 ARHGAP27Q6ZUM4 889 aa12.85□□□□□ -0.35
AC104041.1-201ENST00000560054 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
AC104041.1-201ENST00000560054 ATP10DQ9P241 1426 aa12.85□□□□□ -0.35
AC104041.1-201ENST00000560054 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
AC104041.1-201ENST00000560054 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
AC104041.1-201ENST00000560054 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
AC104041.1-201ENST00000560054 EIF4A1P60842 406 aaKnown RBP12.84□□□□□ -0.35
AC104041.1-201ENST00000560054 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
AC104041.1-201ENST00000560054 NRXN2Q9P2S2 1712 aa12.84□□□□□ -0.35
AC104041.1-201ENST00000560054 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.36
AC104041.1-201ENST00000560054 ZEB1P37275 1124 aaPredicted RBP12.83□□□□□ -0.36
AC104041.1-201ENST00000560054 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
AC104041.1-201ENST00000560054 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
AC104041.1-201ENST00000560054 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 C1QTNF8P60827 252 aa12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 C2CD5Q86YS7 1000 aa12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 CCDC146Q8IYE0 955 aa12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 BRIP1Q9BX63 1249 aa12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 ADAMTS8Q9UP79 889 aa12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 AFDNP55196 1824 aaKnown RBP12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 SCN7AQ01118 1682 aa12.82□□□□□ -0.36
AC104041.1-201ENST00000560054 RGL2O15211 777 aa12.81□□□□□ -0.36
AC104041.1-201ENST00000560054 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
AC104041.1-201ENST00000560054 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
AC104041.1-201ENST00000560054 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
AC104041.1-201ENST00000560054 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
AC104041.1-201ENST00000560054 KDM3BQ7LBC6 1761 aa12.8□□□□□ -0.36
AC104041.1-201ENST00000560054 H0YIN7 160 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms