RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 DISP2A7MBM2 1401 aa17.96■□□□□ 0.47
RABGGTA-212ENST00000559974 CDC45O75419 566 aa17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 TTC22Q5TAA0 569 aa17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 ANTXR1Q9H6X2 564 aa17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 QTRT2Q9H974 415 aaKnown RBP17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 PARP4Q9UKK3 1724 aaKnown RBP17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 SIPA1L3O60292 1781 aaPredicted RBP17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 GNAI3P08754 354 aa17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 HOXB7P09629 217 aa17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 SLKQ9H2G2 1235 aaPredicted RBP17.95■□□□□ 0.46
RABGGTA-212ENST00000559974 PKD1L3Q7Z443 1732 aa17.94■□□□□ 0.46
RABGGTA-212ENST00000559974 EIF4A1P60842 406 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-212ENST00000559974 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-212ENST00000559974 TEFQ10587 303 aa17.93■□□□□ 0.46
RABGGTA-212ENST00000559974 IL2RBP14784 551 aa17.93■□□□□ 0.46
RABGGTA-212ENST00000559974 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
RABGGTA-212ENST00000559974 GJD4Q96KN9 370 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-212ENST00000559974 CHMP4AQ9BY43 222 aa17.93■□□□□ 0.46
RABGGTA-212ENST00000559974 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
RABGGTA-212ENST00000559974 EIF5BO60841 1220 aaKnown RBP17.92■□□□□ 0.46
RABGGTA-212ENST00000559974 FRAT2O75474 233 aaPredicted RBP17.92■□□□□ 0.46
RABGGTA-212ENST00000559974 C1orf141Q5JVX7 400 aa17.92■□□□□ 0.46
RABGGTA-212ENST00000559974 POTEAQ6S8J7 498 aa17.92■□□□□ 0.46
RABGGTA-212ENST00000559974 APBB1O00213 710 aa17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 SMARCA5O60264 1052 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 OTUD7AQ8TE49 926 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 TRPC5Q9UL62 973 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 BTBD11A6QL63 1104 aa17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 RNMTO43148 476 aaKnown RBP17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 HSCBQ8IWL3 235 aa17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 TUBGCP6Q96RT7 1819 aa17.91■□□□□ 0.46
RABGGTA-212ENST00000559974 THSD7AQ9UPZ6 1657 aa17.9■□□□□ 0.46
RABGGTA-212ENST00000559974 BCL11AQ9H165 835 aa17.9■□□□□ 0.46
RABGGTA-212ENST00000559974 PHAXQ9H814 394 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-212ENST00000559974 EIF2S2P20042 333 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-212ENST00000559974 SNX21Q969T3 373 aa17.9■□□□□ 0.46
RABGGTA-212ENST00000559974 CYP27B1O15528 508 aa17.89■□□□□ 0.45
RABGGTA-212ENST00000559974 KCNQ3O43525 872 aa17.89■□□□□ 0.45
RABGGTA-212ENST00000559974 ATP8B2P98198 1209 aa17.89■□□□□ 0.45
RABGGTA-212ENST00000559974 SCN11AQ9UI33 1791 aa17.88■□□□□ 0.45
RABGGTA-212ENST00000559974 BARGINQ6ZT62 677 aa17.88■□□□□ 0.45
RABGGTA-212ENST00000559974 USP44Q9H0E7 712 aa17.88■□□□□ 0.45
RABGGTA-212ENST00000559974 CHPF2Q9P2E5 772 aa17.88■□□□□ 0.45
RABGGTA-212ENST00000559974 BRWD3Q6RI45 1802 aa17.87■□□□□ 0.45
RABGGTA-212ENST00000559974 A0A0G2JS52 829 aa17.87■□□□□ 0.45
RABGGTA-212ENST00000559974 FAM182BQ5T319 152 aa17.87■□□□□ 0.45
RABGGTA-212ENST00000559974 ZCRB1Q8TBF4 217 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-212ENST00000559974 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-212ENST00000559974 KIF2CQ99661 725 aa17.87■□□□□ 0.45
RABGGTA-212ENST00000559974 OSBPL3Q9H4L5 887 aa17.87■□□□□ 0.45
RABGGTA-212ENST00000559974 LRRFIP2Q9Y608 721 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-212ENST00000559974 PNMA6EA0A0J9YXQ4 647 aa17.86■□□□□ 0.45
RABGGTA-212ENST00000559974 UBTFL1P0CB47 393 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-212ENST00000559974 ZNF772Q68DY9 489 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-212ENST00000559974 EXOC6BQ9Y2D4 811 aa17.86■□□□□ 0.45
RABGGTA-212ENST00000559974 THRAP3Q9Y2W1 955 aaKnown RBP17.86■□□□□ 0.45
RABGGTA-212ENST00000559974 SDSP20132 328 aa17.86■□□□□ 0.45
RABGGTA-212ENST00000559974 SRCIN1Q9C0H9 1055 aa17.86■□□□□ 0.45
RABGGTA-212ENST00000559974 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-212ENST00000559974 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
RABGGTA-212ENST00000559974 SPRYD3Q8NCJ5 442 aa17.85■□□□□ 0.45
RABGGTA-212ENST00000559974 LRRCC1Q9C099 1032 aa17.85■□□□□ 0.45
RABGGTA-212ENST00000559974 TNS2Q63HR2 1409 aa17.85■□□□□ 0.45
RABGGTA-212ENST00000559974 HEG1Q9ULI3 1381 aa17.84■□□□□ 0.45
RABGGTA-212ENST00000559974 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
RABGGTA-212ENST00000559974 PHKG2P15735 406 aa17.84■□□□□ 0.45
RABGGTA-212ENST00000559974 PDE1AP54750 535 aa17.84■□□□□ 0.45
RABGGTA-212ENST00000559974 GSE1Q14687 1217 aa17.84■□□□□ 0.45
RABGGTA-212ENST00000559974 KDM6AO15550 1401 aaPredicted RBP17.84■□□□□ 0.45
RABGGTA-212ENST00000559974 DDB1Q16531 1140 aa17.83■□□□□ 0.44
RABGGTA-212ENST00000559974 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
RABGGTA-212ENST00000559974 MARCH10Q8NA82 808 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-212ENST00000559974 DNAAF4Q8WXU2 420 aa17.83■□□□□ 0.44
RABGGTA-212ENST00000559974 DBF4Q9UBU7 674 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-212ENST00000559974 SALL3Q9BXA9 1300 aa17.83■□□□□ 0.44
RABGGTA-212ENST00000559974 CHMP5Q9NZZ3 219 aa17.82■□□□□ 0.44
RABGGTA-212ENST00000559974 SPG7Q9UQ90 795 aa17.82■□□□□ 0.44
RABGGTA-212ENST00000559974 PI4KAP2A4QPH2 592 aa17.82■□□□□ 0.44
RABGGTA-212ENST00000559974 GIGYF1O75420 1035 aaPredicted RBP17.82■□□□□ 0.44
RABGGTA-212ENST00000559974 BEND3Q5T5X7 828 aa17.82■□□□□ 0.44
RABGGTA-212ENST00000559974 PI4KAP1Q8N8J0 262 aa17.82■□□□□ 0.44
RABGGTA-212ENST00000559974 ADCY9O60503 1353 aa17.81■□□□□ 0.44
RABGGTA-212ENST00000559974 EXOC5O00471 708 aa17.81■□□□□ 0.44
RABGGTA-212ENST00000559974 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
RABGGTA-212ENST00000559974 RBM6P78332 1123 aaKnown RBP17.81■□□□□ 0.44
RABGGTA-212ENST00000559974 SSH3Q8TE77 659 aa17.81■□□□□ 0.44
RABGGTA-212ENST00000559974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.8■□□□□ 0.441e-7■□□□□ 10.6
RABGGTA-212ENST00000559974 PCDH11XQ9BZA7 1347 aa17.8■□□□□ 0.44
RABGGTA-212ENST00000559974 PCDH11YQ9BZA8 1340 aa17.8■□□□□ 0.44
RABGGTA-212ENST00000559974 KAT6BQ8WYB5 2073 aa17.8■□□□□ 0.44
RABGGTA-212ENST00000559974 C5P01031 1676 aa17.8■□□□□ 0.44
RABGGTA-212ENST00000559974 ANXA1P04083 346 aa17.8■□□□□ 0.44
RABGGTA-212ENST00000559974 USP26Q9BXU7 913 aa17.8■□□□□ 0.44
RABGGTA-212ENST00000559974 PLEKHG2Q9H7P9 1386 aa17.8■□□□□ 0.44
RABGGTA-212ENST00000559974 AK9Q5TCS8 1911 aa17.8■□□□□ 0.44
RABGGTA-212ENST00000559974 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-212ENST00000559974 MX1P20591 662 aa17.79■□□□□ 0.44
RABGGTA-212ENST00000559974 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms