RNA–Protein interactions for RNA: ENST00000559507.1

AMN-205, Transcript of amnion associated transmembrane protein, human

TSL 3

Gene AMN, Length 435 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMN-205	ENST00000559507	SENP3-EIF4A1	A0A087X0R7	540 aa		33.47	■■■□□ 2.95
AMN-205	ENST00000559507	MIS18A	Q9NYP9	233 aa		33.47	■■■□□ 2.95
AMN-205	ENST00000559507	RIPK4	P57078	832 aa		33.46	■■■□□ 2.95
AMN-205	ENST00000559507	ZBTB1	Q9Y2K1	713 aa		33.46	■■■□□ 2.95
AMN-205	ENST00000559507	PELP1	Q8IZL8	1130 aa	Known RBP	33.45	■■■□□ 2.95
AMN-205	ENST00000559507	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.45	■■■□□ 2.95
AMN-205	ENST00000559507	DLG5	Q8TDM6	1919 aa		33.45	■■■□□ 2.95
AMN-205	ENST00000559507	CANX	P27824	592 aa	Known RBP	33.44	■■■□□ 2.94
AMN-205	ENST00000559507	TMPO	P42166	694 aa	Known RBP	33.44	■■■□□ 2.94
AMN-205	ENST00000559507	SRP68	Q9UHB9	627 aa	Known RBP	33.44	■■■□□ 2.94
AMN-205	ENST00000559507	RRP7A	Q9Y3A4	280 aa	Known RBP	33.44	■■■□□ 2.94
AMN-205	ENST00000559507	SOS1	Q07889	1333 aa	Predicted RBP	33.44	■■■□□ 2.94
AMN-205	ENST00000559507	GYS1	P13807	737 aa		33.43	■■■□□ 2.94
AMN-205	ENST00000559507	NLGN1	Q8N2Q7	840 aa		33.43	■■■□□ 2.94
AMN-205	ENST00000559507	RUNDC1	Q96C34	613 aa		33.43	■■■□□ 2.94
AMN-205	ENST00000559507	ANP32C	O43423	234 aa		33.42	■■■□□ 2.94
AMN-205	ENST00000559507	MMP10	P09238	476 aa		33.42	■■■□□ 2.94
AMN-205	ENST00000559507	NEUROD2	Q15784	382 aa		33.42	■■■□□ 2.94
AMN-205	ENST00000559507	NLGN2	Q8NFZ4	835 aa		33.4	■■■□□ 2.94
AMN-205	ENST00000559507	CCDC184	Q52MB2	194 aa		33.39	■■■□□ 2.94
AMN-205	ENST00000559507	PNISR	Q8TF01	805 aa	Known RBP	33.39	■■■□□ 2.94
AMN-205	ENST00000559507	USP42	Q9H9J4	1324 aa	Known RBP	33.38	■■■□□ 2.93
AMN-205	ENST00000559507	PRAMEF22	A3QJZ6	481 aa		33.38	■■■□□ 2.93
AMN-205	ENST00000559507	ZPR1	O75312	459 aa		33.37	■■■□□ 2.93
AMN-205	ENST00000559507	SNRPA1	P09661	255 aa	Known RBP	33.37	■■■□□ 2.93
AMN-205	ENST00000559507	LMOD3	Q0VAK6	560 aa		33.37	■■■□□ 2.93
AMN-205	ENST00000559507	COL15A1	P39059	1388 aa		33.36	■■■□□ 2.93
AMN-205	ENST00000559507	GIGYF1	O75420	1035 aa	Predicted RBP	33.36	■■■□□ 2.93
AMN-205	ENST00000559507	A1BG	P04217	495 aa		33.36	■■■□□ 2.93
AMN-205	ENST00000559507	USP16	Q9Y5T5	823 aa		33.36	■■■□□ 2.93
AMN-205	ENST00000559507	C4A	P0C0L4	1744 aa		33.36	■■■□□ 2.93
AMN-205	ENST00000559507	FKBP8	Q14318	412 aa		33.35	■■■□□ 2.93
AMN-205	ENST00000559507	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.35	■■■□□ 2.93
AMN-205	ENST00000559507	CD2AP	Q9Y5K6	639 aa		33.35	■■■□□ 2.93
AMN-205	ENST00000559507	USPL1	Q5W0Q7	1092 aa		33.34	■■■□□ 2.93
AMN-205	ENST00000559507	GRIN3B	O60391	1043 aa		33.33	■■■□□ 2.93
AMN-205	ENST00000559507	EIF5	P55010	431 aa	Known RBP	33.33	■■■□□ 2.93
AMN-205	ENST00000559507	NARF	Q9UHQ1	456 aa		33.32	■■■□□ 2.92
AMN-205	ENST00000559507	PARP3	Q9Y6F1	533 aa		33.31	■■■□□ 2.92
AMN-205	ENST00000559507	TSPYL4	Q9UJ04	414 aa		33.3	■■■□□ 2.92
AMN-205	ENST00000559507	GOLGB1	Q14789	3259 aa	Known RBP	33.3	■■■□□ 2.92
AMN-205	ENST00000559507		A0A087WZG4	1122 aa		33.29	■■■□□ 2.92
AMN-205	ENST00000559507	IL6ST	P40189	918 aa	Predicted RBP	33.29	■■■□□ 2.92
AMN-205	ENST00000559507	PIP4K2A	P48426	406 aa	Predicted RBP	33.29	■■■□□ 2.92
AMN-205	ENST00000559507	EIF4A1	P60842	406 aa	Known RBP	33.28	■■■□□ 2.92
AMN-205	ENST00000559507	NPM2	Q86SE8	214 aa	Known RBP	33.28	■■■□□ 2.92
AMN-205	ENST00000559507	MRS2	Q9HD23	443 aa		33.28	■■■□□ 2.92
AMN-205	ENST00000559507	TRIM35	Q9UPQ4	493 aa		33.28	■■■□□ 2.92
AMN-205	ENST00000559507	APAF1	O14727	1248 aa		33.26	■■■□□ 2.91
AMN-205	ENST00000559507	TBC1D2B	Q9UPU7	963 aa		33.26	■■■□□ 2.91
AMN-205	ENST00000559507	DDR1	Q08345	913 aa		33.25	■■■□□ 2.91
AMN-205	ENST00000559507	BCL2L12	Q9HB09	334 aa		33.24	■■■□□ 2.91
AMN-205	ENST00000559507	YBX3	P16989	372 aa	Known RBP eCLIP	33.23	■■■□□ 2.91
AMN-205	ENST00000559507	KDM3B	Q7LBC6	1761 aa		33.23	■■■□□ 2.91
AMN-205	ENST00000559507	TM4SF1	P30408	202 aa		33.22	■■■□□ 2.91
AMN-205	ENST00000559507	LAS1L	Q9Y4W2	734 aa	Known RBP	33.22	■■■□□ 2.91
AMN-205	ENST00000559507	NFIX	Q14938	502 aa		33.21	■■■□□ 2.91
AMN-205	ENST00000559507	BABAM1	Q9NWV8	329 aa		33.21	■■■□□ 2.91
AMN-205	ENST00000559507	NBPF26	B4DH59	902 aa		33.2	■■■□□ 2.91
AMN-205	ENST00000559507	NBPF10	Q6P3W6	841 aa	Known RBP	33.2	■■■□□ 2.91
AMN-205	ENST00000559507	NBPF15	Q8N660	670 aa		33.2	■■■□□ 2.91
AMN-205	ENST00000559507	POLRMT	O00411	1230 aa	Known RBP	33.19	■■■□□ 2.9
AMN-205	ENST00000559507	BICDL1	Q6ZP65	573 aa		33.18	■■■□□ 2.9
AMN-205	ENST00000559507	DZIP3	Q86Y13	1208 aa	Known RBP	33.18	■■■□□ 2.9
AMN-205	ENST00000559507	WWC3	Q9ULE0	1092 aa		33.18	■■■□□ 2.9
AMN-205	ENST00000559507	C10orf71	Q711Q0	1435 aa		33.16	■■■□□ 2.9
AMN-205	ENST00000559507	CHL1	O00533	1208 aa		33.15	■■■□□ 2.9
AMN-205	ENST00000559507	CAMTA2	O94983	1202 aa		33.15	■■■□□ 2.9
AMN-205	ENST00000559507	TBC1D9B	Q66K14	1250 aa		33.14	■■■□□ 2.9
AMN-205	ENST00000559507		A0A0G2JLW4	131 aa		33.12	■■■□□ 2.89
AMN-205	ENST00000559507	TGFB2	P61812	414 aa		33.12	■■■□□ 2.89
AMN-205	ENST00000559507	NGEF	Q8N5V2	710 aa		33.12	■■■□□ 2.89
AMN-205	ENST00000559507	SERPINB2	P05120	415 aa		33.11	■■■□□ 2.89
AMN-205	ENST00000559507	EIF2S2	P20042	333 aa	Known RBP	33.1	■■■□□ 2.89
AMN-205	ENST00000559507	PXDNL	A1KZ92	1463 aa		33.1	■■■□□ 2.89
AMN-205	ENST00000559507	LAMB4	A4D0S4	1761 aa		33.09	■■■□□ 2.89
AMN-205	ENST00000559507	MYL6B	P14649	208 aa		33.09	■■■□□ 2.89
AMN-205	ENST00000559507	DPEP1	P16444	411 aa		33.09	■■■□□ 2.89
AMN-205	ENST00000559507	CFAP44	Q96MT7	982 aa		33.09	■■■□□ 2.89
AMN-205	ENST00000559507	ATP10D	Q9P241	1426 aa		33.09	■■■□□ 2.89
AMN-205	ENST00000559507	KRT24	Q2M2I5	525 aa		33.08	■■■□□ 2.89
AMN-205	ENST00000559507	SCN7A	Q01118	1682 aa		33.07	■■■□□ 2.88
AMN-205	ENST00000559507	KIF13B	Q9NQT8	1826 aa		33.07	■■■□□ 2.88
AMN-205	ENST00000559507	CALD1	Q05682	793 aa	Known RBP	33.06	■■■□□ 2.88
AMN-205	ENST00000559507	SETDB2	Q96T68	719 aa		33.06	■■■□□ 2.88
AMN-205	ENST00000559507	NECTIN2	Q92692	538 aa		33.05	■■■□□ 2.88
AMN-205	ENST00000559507	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.05	■■■□□ 2.88
AMN-205	ENST00000559507	ZNF652	Q9Y2D9	606 aa		33.05	■■■□□ 2.88
AMN-205	ENST00000559507	MBIP	Q9NS73	344 aa		33.04	■■■□□ 2.88
AMN-205	ENST00000559507	ERBB4	Q15303	1308 aa		33.02	■■■□□ 2.88
AMN-205	ENST00000559507	CARMIL3	Q8ND23	1372 aa		33.02	■■■□□ 2.88
AMN-205	ENST00000559507	CHRNA5	P30532	468 aa		33.02	■■■□□ 2.88
AMN-205	ENST00000559507	CLEC4G	Q6UXB4	293 aa		33.02	■■■□□ 2.88
AMN-205	ENST00000559507	FAM9B	Q8IZU0	186 aa		33.02	■■■□□ 2.88
AMN-205	ENST00000559507	IFT57	Q9NWB7	429 aa		33.02	■■■□□ 2.88
AMN-205	ENST00000559507	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.01	■■■□□ 2.88
AMN-205	ENST00000559507	ZNF853	P0CG23	659 aa		33.01	■■■□□ 2.87
AMN-205	ENST00000559507	GNAI1	P63096	354 aa		33.01	■■■□□ 2.87
AMN-205	ENST00000559507	TTLL7	Q6ZT98	887 aa		33.01	■■■□□ 2.87
AMN-205	ENST00000559507	KCNA3	P22001	575 aa		33	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms