RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 SIPA1L3O60292 1781 aaPredicted RBP33.52■■■□□ 2.96
CRNDE-206ENST00000559432 CANXP27824 592 aaKnown RBP33.51■■■□□ 2.95
CRNDE-206ENST00000559432 FMNL2Q96PY5 1086 aa33.51■■■□□ 2.95
CRNDE-206ENST00000559432 PXDNLA1KZ92 1463 aa33.5■■■□□ 2.95
CRNDE-206ENST00000559432 MCM10Q7L590 875 aa33.49■■■□□ 2.95
CRNDE-206ENST00000559432 NARFQ9UHQ1 456 aa33.49■■■□□ 2.95
CRNDE-206ENST00000559432 KIF13BQ9NQT8 1826 aa33.49■■■□□ 2.95
CRNDE-206ENST00000559432 HTATSF1O43719 755 aaKnown RBP33.48■■■□□ 2.95
CRNDE-206ENST00000559432 A0A0G2JLW4 131 aa33.47■■■□□ 2.95
CRNDE-206ENST00000559432 DDR1Q08345 913 aa33.47■■■□□ 2.95
CRNDE-206ENST00000559432 RALBP1Q15311 655 aa33.46■■■□□ 2.95
CRNDE-206ENST00000559432 DDX10Q13206 875 aaKnown RBP33.45■■■□□ 2.95
CRNDE-206ENST00000559432 A0A087WZG4 1122 aa33.44■■■□□ 2.94
CRNDE-206ENST00000559432 TM4SF1P30408 202 aa33.44■■■□□ 2.94
CRNDE-206ENST00000559432 KCNQ3O43525 872 aa33.43■■■□□ 2.94
CRNDE-206ENST00000559432 DPEP1P16444 411 aa33.43■■■□□ 2.94
CRNDE-206ENST00000559432 DCTN1Q14203 1278 aa33.43■■■□□ 2.94
CRNDE-206ENST00000559432 PNNQ9H307 717 aaKnown RBP33.43■■■□□ 2.94
CRNDE-206ENST00000559432 POLRMTO00411 1230 aaKnown RBP33.42■■■□□ 2.94
CRNDE-206ENST00000559432 EIF5P55010 431 aaKnown RBP33.42■■■□□ 2.94
CRNDE-206ENST00000559432 BCS1LQ9Y276 419 aa33.42■■■□□ 2.94
CRNDE-206ENST00000559432 GOLGB1Q14789 3259 aaKnown RBP33.42■■■□□ 2.94
CRNDE-206ENST00000559432 KIAA1551Q9HCM1 1747 aa33.42■■■□□ 2.94
CRNDE-206ENST00000559432 NPM2Q86SE8 214 aaKnown RBP33.41■■■□□ 2.94
CRNDE-206ENST00000559432 ZNF330Q9Y3S2 320 aaPredicted RBP33.41■■■□□ 2.94
CRNDE-206ENST00000559432 N4BP2Q86UW6 1770 aaPredicted RBP33.41■■■□□ 2.94
CRNDE-206ENST00000559432 NFIXQ14938 502 aa33.39■■■□□ 2.94
CRNDE-206ENST00000559432 MAPK8IP3Q9UPT6 1336 aa33.38■■■□□ 2.93
CRNDE-206ENST00000559432 IL6STP40189 918 aaPredicted RBP33.38■■■□□ 2.93
CRNDE-206ENST00000559432 BCL2L12Q9HB09 334 aa33.38■■■□□ 2.93
CRNDE-206ENST00000559432 PLEKHF1Q96S99 279 aa33.37■■■□□ 2.93
CRNDE-206ENST00000559432 A1BGP04217 495 aa33.36■■■□□ 2.93
CRNDE-206ENST00000559432 TAF7Q15545 349 aaPredicted RBP33.36■■■□□ 2.93
CRNDE-206ENST00000559432 PIM2Q9P1W9 311 aa33.35■■■□□ 2.93
CRNDE-206ENST00000559432 SNRPA1P09661 255 aaKnown RBP33.34■■■□□ 2.93
CRNDE-206ENST00000559432 NFE2L2Q16236 605 aa33.34■■■□□ 2.93
CRNDE-206ENST00000559432 SERPINB2P05120 415 aa33.33■■■□□ 2.93
CRNDE-206ENST00000559432 USP16Q9Y5T5 823 aa33.33■■■□□ 2.93
CRNDE-206ENST00000559432 ATP10DQ9P241 1426 aa33.33■■■□□ 2.93
CRNDE-206ENST00000559432 KCNA3P22001 575 aa33.32■■■□□ 2.92
CRNDE-206ENST00000559432 BICDL1Q6ZP65 573 aa33.32■■■□□ 2.92
CRNDE-206ENST00000559432 TBC1D2BQ9UPU7 963 aa33.32■■■□□ 2.92
CRNDE-206ENST00000559432 GIGYF1O75420 1035 aaPredicted RBP33.31■■■□□ 2.92
CRNDE-206ENST00000559432 PNISRQ8TF01 805 aaKnown RBP33.31■■■□□ 2.92
CRNDE-206ENST00000559432 MYBBP1AQ9BQG0 1328 aaKnown RBP33.3■■■□□ 2.92
CRNDE-206ENST00000559432 CHRNA5P30532 468 aa33.29■■■□□ 2.92
CRNDE-206ENST00000559432 DALRD3Q5D0E6 543 aaKnown RBP33.29■■■□□ 2.92
CRNDE-206ENST00000559432 ARHGAP27Q6ZUM4 889 aa33.29■■■□□ 2.92
CRNDE-206ENST00000559432 PRAMEF22A3QJZ6 481 aa33.28■■■□□ 2.92
CRNDE-206ENST00000559432 ADCY9O60503 1353 aa33.28■■■□□ 2.92
CRNDE-206ENST00000559432 MIS18AQ9NYP9 233 aa33.27■■■□□ 2.92
CRNDE-206ENST00000559432 SCN7AQ01118 1682 aa33.26■■■□□ 2.92
CRNDE-206ENST00000559432 TBC1D9BQ66K14 1250 aa33.26■■■□□ 2.91
CRNDE-206ENST00000559432 DZIP3Q86Y13 1208 aaKnown RBP33.26■■■□□ 2.91
CRNDE-206ENST00000559432 BRCA1P38398 1863 aaKnown RBP33.25■■■□□ 2.91
CRNDE-206ENST00000559432 PIP4K2AP48426 406 aaPredicted RBP33.25■■■□□ 2.91
CRNDE-206ENST00000559432 C1QTNF8P60827 252 aa33.25■■■□□ 2.91
CRNDE-206ENST00000559432 GPBP1L1Q9HC44 474 aaPredicted RBP33.25■■■□□ 2.91
CRNDE-206ENST00000559432 NRXN2Q9P2S2 1712 aa33.25■■■□□ 2.91
CRNDE-206ENST00000559432 DLG5Q8TDM6 1919 aa33.24■■■□□ 2.91
CRNDE-206ENST00000559432 AFDNP55196 1824 aaKnown RBP33.24■■■□□ 2.91
CRNDE-206ENST00000559432 CAMTA2O94983 1202 aa33.23■■■□□ 2.91
CRNDE-206ENST00000559432 ZNF526Q8TF50 670 aaPredicted RBP33.22■■■□□ 2.91
CRNDE-206ENST00000559432 THUMPD2Q9BTF0 503 aaKnown RBP33.22■■■□□ 2.91
CRNDE-206ENST00000559432 CARMIL3Q8ND23 1372 aa33.21■■■□□ 2.91
CRNDE-206ENST00000559432 SETDB2Q96T68 719 aa33.21■■■□□ 2.91
CRNDE-206ENST00000559432 NPHP1O15259 732 aa33.18■■■□□ 2.9
CRNDE-206ENST00000559432 RIPK4P57078 832 aa33.18■■■□□ 2.9
CRNDE-206ENST00000559432 C2CD5Q86YS7 1000 aa33.18■■■□□ 2.9
CRNDE-206ENST00000559432 ZNF652Q9Y2D9 606 aa33.18■■■□□ 2.9
CRNDE-206ENST00000559432 ARFGEF1Q9Y6D6 1849 aa33.18■■■□□ 2.9
CRNDE-206ENST00000559432 H0YIN7 160 aa33.17■■■□□ 2.9
CRNDE-206ENST00000559432 WDR43Q15061 677 aaKnown RBP eCLIP33.17■■■□□ 2.9
CRNDE-206ENST00000559432 NBPF26B4DH59 902 aa33.16■■■□□ 2.9
CRNDE-206ENST00000559432 LMOD3Q0VAK6 560 aa33.16■■■□□ 2.9
CRNDE-206ENST00000559432 NBPF10Q6P3W6 841 aaKnown RBP33.16■■■□□ 2.9
CRNDE-206ENST00000559432 NBPF15Q8N660 670 aa33.16■■■□□ 2.9
CRNDE-206ENST00000559432 KDM3BQ7LBC6 1761 aa33.16■■■□□ 2.9
CRNDE-206ENST00000559432 EIF4A1P60842 406 aaKnown RBP33.15■■■□□ 2.9
CRNDE-206ENST00000559432 PRR5LQ6MZQ0 368 aa33.15■■■□□ 2.9
CRNDE-206ENST00000559432 BCORQ6W2J9 1755 aa33.14■■■□□ 2.9
CRNDE-206ENST00000559432 PDE6BP35913 854 aa33.14■■■□□ 2.9
CRNDE-206ENST00000559432 CLEC4GQ6UXB4 293 aa33.14■■■□□ 2.9
CRNDE-206ENST00000559432 BRIP1Q9BX63 1249 aa33.14■■■□□ 2.9
CRNDE-206ENST00000559432 TMPOP42166 694 aaKnown RBP33.13■■■□□ 2.89
CRNDE-206ENST00000559432 CNBD1Q8NA66 436 aa33.13■■■□□ 2.89
CRNDE-206ENST00000559432 PDZRN3Q9UPQ7 1066 aa33.13■■■□□ 2.89
CRNDE-206ENST00000559432 LAMB4A4D0S4 1761 aa33.13■■■□□ 2.89
CRNDE-206ENST00000559432 TTLL6Q8N841 843 aa33.12■■■□□ 2.89
CRNDE-206ENST00000559432 ST5P78524 1137 aa33.11■■■□□ 2.89
CRNDE-206ENST00000559432 CCDC146Q8IYE0 955 aa33.11■■■□□ 2.89
CRNDE-206ENST00000559432 CCDC24Q8N4L8 307 aa33.11■■■□□ 2.89
CRNDE-206ENST00000559432 PRKRIP1Q9H875 184 aaPredicted RBP33.11■■■□□ 2.89
CRNDE-206ENST00000559432 TSPYL4Q9UJ04 414 aa33.11■■■□□ 2.89
CRNDE-206ENST00000559432 ZEB1P37275 1124 aaPredicted RBP33.1■■■□□ 2.89
CRNDE-206ENST00000559432 C9orf131Q5VYM1 1079 aa33.1■■■□□ 2.89
CRNDE-206ENST00000559432 SENP3-EIF4A1A0A087X0R7 540 aa33.09■■■□□ 2.89
CRNDE-206ENST00000559432 RGL2O15211 777 aa33.09■■■□□ 2.89
CRNDE-206ENST00000559432 DLEC1Q9Y238 1755 aa33.09■■■□□ 2.89
CRNDE-206ENST00000559432 ZNF622Q969S3 477 aaKnown RBP eCLIP33.08■■■□□ 2.892e-6■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms