RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 NARFQ9UHQ1 456 aa14.46□□□□□ -0.09
AP3S2-206ENST00000558806 NPC1L1Q9UHC9 1359 aa14.46□□□□□ -0.1
AP3S2-206ENST00000558806 ZBTB1Q9Y2K1 713 aa14.45□□□□□ -0.1
AP3S2-206ENST00000558806 VIRMAQ69YN4 1812 aaKnown RBP14.45□□□□□ -0.1
AP3S2-206ENST00000558806 CHRNA5P30532 468 aa14.44□□□□□ -0.1
AP3S2-206ENST00000558806 APLP1P51693 650 aa14.44□□□□□ -0.1
AP3S2-206ENST00000558806 TTC5Q8N0Z6 440 aa14.44□□□□□ -0.1
AP3S2-206ENST00000558806 UBR2Q8IWV8 1755 aa14.43□□□□□ -0.1
AP3S2-206ENST00000558806 STARD3NLO95772 234 aa14.43□□□□□ -0.1
AP3S2-206ENST00000558806 NFIXQ14938 502 aa14.43□□□□□ -0.1
AP3S2-206ENST00000558806 GAS2L2Q8NHY3 880 aa14.43□□□□□ -0.1
AP3S2-206ENST00000558806 NMRK2Q9NPI5 230 aa14.43□□□□□ -0.1
AP3S2-206ENST00000558806 KDM2BQ8NHM5 1336 aa14.42□□□□□ -0.1
AP3S2-206ENST00000558806 NRXN2Q9P2S2 1712 aa14.42□□□□□ -0.1
AP3S2-206ENST00000558806 U2SURPO15042 1029 aaKnown RBP14.42□□□□□ -0.1
AP3S2-206ENST00000558806 TEFQ10587 303 aa14.42□□□□□ -0.1
AP3S2-206ENST00000558806 IFFO2Q5TF58 517 aa14.42□□□□□ -0.1
AP3S2-206ENST00000558806 C16orf71Q8IYS4 520 aaPredicted RBP14.42□□□□□ -0.1
AP3S2-206ENST00000558806 RNF181Q9P0P0 153 aa14.42□□□□□ -0.1
AP3S2-206ENST00000558806 COL3A1P02461 1466 aaPredicted RBP14.42□□□□□ -0.1
AP3S2-206ENST00000558806 GNAT3A8MTJ3 354 aa14.41□□□□□ -0.1
AP3S2-206ENST00000558806 SERPINB2P05120 415 aa14.41□□□□□ -0.1
AP3S2-206ENST00000558806 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
AP3S2-206ENST00000558806 RBM46Q8TBY0 533 aaKnown RBP14.41□□□□□ -0.1
AP3S2-206ENST00000558806 TEX13AQ9BXU3 409 aaPredicted RBP14.41□□□□□ -0.1
AP3S2-206ENST00000558806 BCL2L12Q9HB09 334 aa14.41□□□□□ -0.1
AP3S2-206ENST00000558806 A0A087WZG4 1122 aa14.4□□□□□ -0.1
AP3S2-206ENST00000558806 ZNF790Q6PG37 636 aa14.4□□□□□ -0.1
AP3S2-206ENST00000558806 AFDNP55196 1824 aaKnown RBP14.4□□□□□ -0.1
AP3S2-206ENST00000558806 ZC3H4Q9UPT8 1303 aaKnown RBP14.4□□□□□ -0.1
AP3S2-206ENST00000558806 HEG1Q9ULI3 1381 aa14.39□□□□□ -0.11
AP3S2-206ENST00000558806 EIF5P55010 431 aaKnown RBP14.39□□□□□ -0.11
AP3S2-206ENST00000558806 IL17REQ8NFR9 667 aa14.39□□□□□ -0.11
AP3S2-206ENST00000558806 ZNF496Q96IT1 587 aaPredicted RBP14.39□□□□□ -0.11
AP3S2-206ENST00000558806 DLEC1Q9Y238 1755 aa14.38□□□□□ -0.11
AP3S2-206ENST00000558806 FSTL1Q12841 308 aa14.38□□□□□ -0.11
AP3S2-206ENST00000558806 CNGB1Q14028 1251 aaPredicted RBP14.38□□□□□ -0.11
AP3S2-206ENST00000558806 TTLL6Q8N841 843 aa14.38□□□□□ -0.11
AP3S2-206ENST00000558806 TNRC6CQ9HCJ0 1690 aaKnown RBP14.37□□□□□ -0.11
AP3S2-206ENST00000558806 H0YIN7 160 aa14.37□□□□□ -0.11
AP3S2-206ENST00000558806 NPM2Q86SE8 214 aaKnown RBP14.37□□□□□ -0.11
AP3S2-206ENST00000558806 C2CD5Q86YS7 1000 aa14.37□□□□□ -0.11
AP3S2-206ENST00000558806 CFAP53Q96M91 514 aa14.37□□□□□ -0.11
AP3S2-206ENST00000558806 FMNL2Q96PY5 1086 aa14.37□□□□□ -0.11
AP3S2-206ENST00000558806 CEMIPQ8WUJ3 1361 aa14.36□□□□□ -0.11
AP3S2-206ENST00000558806 SBF1O95248 1867 aa14.36□□□□□ -0.11
AP3S2-206ENST00000558806 LMNB1P20700 586 aa14.36□□□□□ -0.11
AP3S2-206ENST00000558806 IL6STP40189 918 aaPredicted RBP14.36□□□□□ -0.11
AP3S2-206ENST00000558806 RASSF7Q02833 373 aa14.36□□□□□ -0.11
AP3S2-206ENST00000558806 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
AP3S2-206ENST00000558806 PDZRN3Q9UPQ7 1066 aa14.36□□□□□ -0.11
AP3S2-206ENST00000558806 SIPA1L3O60292 1781 aaPredicted RBP14.36□□□□□ -0.11
AP3S2-206ENST00000558806 SCN7AQ01118 1682 aa14.36□□□□□ -0.11
AP3S2-206ENST00000558806 CARMIL3Q8ND23 1372 aa14.35□□□□□ -0.11
AP3S2-206ENST00000558806 TBC1D9BQ66K14 1250 aa14.35□□□□□ -0.11
AP3S2-206ENST00000558806 DNAJC5GQ8N7S2 189 aa14.35□□□□□ -0.11
AP3S2-206ENST00000558806 RRAGCQ9HB90 399 aa14.35□□□□□ -0.11
AP3S2-206ENST00000558806 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
AP3S2-206ENST00000558806 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
AP3S2-206ENST00000558806 PRKAR2BP31323 418 aa14.34□□□□□ -0.11
AP3S2-206ENST00000558806 PDE6BP35913 854 aa14.34□□□□□ -0.11
AP3S2-206ENST00000558806 BRIP1Q9BX63 1249 aa14.34□□□□□ -0.11
AP3S2-206ENST00000558806 RSPH6AQ9H0K4 717 aa14.34□□□□□ -0.11
AP3S2-206ENST00000558806 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
AP3S2-206ENST00000558806 WDR90Q96KV7 1748 aa14.34□□□□□ -0.11
AP3S2-206ENST00000558806 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
AP3S2-206ENST00000558806 TBC1D2BQ9UPU7 963 aa14.33□□□□□ -0.12
AP3S2-206ENST00000558806 GLTPD2A6NH11 291 aa14.32□□□□□ -0.12
AP3S2-206ENST00000558806 A1BGP04217 495 aa14.32□□□□□ -0.12
AP3S2-206ENST00000558806 PRR5LQ6MZQ0 368 aa14.32□□□□□ -0.12
AP3S2-206ENST00000558806 SMC1BQ8NDV3 1235 aa14.32□□□□□ -0.12
AP3S2-206ENST00000558806 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
AP3S2-206ENST00000558806 ZNF622Q969S3 477 aaKnown RBP eCLIP14.32□□□□□ -0.12
AP3S2-206ENST00000558806 SETDB2Q96T68 719 aa14.32□□□□□ -0.12
AP3S2-206ENST00000558806 NFKBIEO00221 500 aa14.31□□□□□ -0.12
AP3S2-206ENST00000558806 NPHP1O15259 732 aa14.31□□□□□ -0.12
AP3S2-206ENST00000558806 CAMTA2O94983 1202 aa14.31□□□□□ -0.12
AP3S2-206ENST00000558806 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
AP3S2-206ENST00000558806 PRELPP51888 382 aa14.31□□□□□ -0.12
AP3S2-206ENST00000558806 CNBD1Q8NA66 436 aa14.31□□□□□ -0.12
AP3S2-206ENST00000558806 TIAM2Q8IVF5 1701 aa14.3□□□□□ -0.12
AP3S2-206ENST00000558806 ANKRD31Q8N7Z5 1873 aa14.3□□□□□ -0.12
AP3S2-206ENST00000558806 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
AP3S2-206ENST00000558806 ST5P78524 1137 aa14.3□□□□□ -0.12
AP3S2-206ENST00000558806 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
AP3S2-206ENST00000558806 DZIP3Q86Y13 1208 aaKnown RBP14.3□□□□□ -0.12
AP3S2-206ENST00000558806 KLRG1Q96E93 195 aa14.3□□□□□ -0.12
AP3S2-206ENST00000558806 KCNQ3O43525 872 aa14.29□□□□□ -0.12
AP3S2-206ENST00000558806 DPY19L2Q6NUT2 758 aa14.29□□□□□ -0.12
AP3S2-206ENST00000558806 USP16Q9Y5T5 823 aa14.29□□□□□ -0.12
AP3S2-206ENST00000558806 BCORQ6W2J9 1755 aa14.29□□□□□ -0.12
AP3S2-206ENST00000558806 C21orf2O43822 256 aa14.28□□□□□ -0.12
AP3S2-206ENST00000558806 SNRPA1P09661 255 aaKnown RBP14.28□□□□□ -0.12
AP3S2-206ENST00000558806 COL11A2P13942 1736 aaPredicted RBP14.28□□□□□ -0.12
AP3S2-206ENST00000558806 PPP2R1AP30153 589 aa14.28□□□□□ -0.12
AP3S2-206ENST00000558806 CLEC4GQ6UXB4 293 aa14.28□□□□□ -0.12
AP3S2-206ENST00000558806 CCDC24Q8N4L8 307 aa14.28□□□□□ -0.12
AP3S2-206ENST00000558806 CNKSR1Q969H4 720 aa14.28□□□□□ -0.12
AP3S2-206ENST00000558806 ZNF652Q9Y2D9 606 aa14.28□□□□□ -0.12
AP3S2-206ENST00000558806 LTBP3Q9NS15 1303 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 1078.6 ms