RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 SRP68Q9UHB9 627 aaKnown RBP13.55□□□□□ -0.24
TPM1-212ENST00000558347 ZNF790Q6PG37 636 aa13.54□□□□□ -0.24
TPM1-212ENST00000558347 TTC5Q8N0Z6 440 aa13.54□□□□□ -0.24
TPM1-212ENST00000558347 ZBTB1Q9Y2K1 713 aa13.54□□□□□ -0.24
TPM1-212ENST00000558347 SOS1Q07889 1333 aaPredicted RBP13.54□□□□□ -0.24
TPM1-212ENST00000558347 USP42Q9H9J4 1324 aaKnown RBP13.54□□□□□ -0.24
TPM1-212ENST00000558347 KIF13BQ9NQT8 1826 aa13.54□□□□□ -0.24
TPM1-212ENST00000558347 MCM10Q7L590 875 aa13.54□□□□□ -0.24
TPM1-212ENST00000558347 PNISRQ8TF01 805 aaKnown RBP13.54□□□□□ -0.24
TPM1-212ENST00000558347 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
TPM1-212ENST00000558347 KIAA1551Q9HCM1 1747 aa13.53□□□□□ -0.24
TPM1-212ENST00000558347 ZBED9Q6R2W3 1325 aa13.53□□□□□ -0.24
TPM1-212ENST00000558347 DLG5Q8TDM6 1919 aa13.53□□□□□ -0.24
TPM1-212ENST00000558347 KCNQ3O43525 872 aa13.53□□□□□ -0.24
TPM1-212ENST00000558347 DCTN1Q14203 1278 aa13.53□□□□□ -0.24
TPM1-212ENST00000558347 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.25
TPM1-212ENST00000558347 PLEKHF1Q96S99 279 aa13.52□□□□□ -0.25
TPM1-212ENST00000558347 COL15A1P39059 1388 aa13.51□□□□□ -0.25
TPM1-212ENST00000558347 BTBD11A6QL63 1104 aa13.51□□□□□ -0.25
TPM1-212ENST00000558347 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
TPM1-212ENST00000558347 RTF1Q92541 710 aaKnown RBP13.51□□□□□ -0.25
TPM1-212ENST00000558347 WWC3Q9ULE0 1092 aa13.51□□□□□ -0.25
TPM1-212ENST00000558347 C10orf71Q711Q0 1435 aa13.51□□□□□ -0.25
TPM1-212ENST00000558347 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
TPM1-212ENST00000558347 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
TPM1-212ENST00000558347 PARP3Q9Y6F1 533 aa13.5□□□□□ -0.25
TPM1-212ENST00000558347 PXDNLA1KZ92 1463 aa13.5□□□□□ -0.25
TPM1-212ENST00000558347 DDR1Q08345 913 aa13.49□□□□□ -0.25
TPM1-212ENST00000558347 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
TPM1-212ENST00000558347 HTATSF1O43719 755 aaKnown RBP13.49□□□□□ -0.25
TPM1-212ENST00000558347 GRIN3BO60391 1043 aa13.49□□□□□ -0.25
TPM1-212ENST00000558347 ZPR1O75312 459 aa13.49□□□□□ -0.25
TPM1-212ENST00000558347 STARD3NLO95772 234 aa13.49□□□□□ -0.25
TPM1-212ENST00000558347 NARFQ9UHQ1 456 aa13.49□□□□□ -0.25
TPM1-212ENST00000558347 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
TPM1-212ENST00000558347 TM4SF1P30408 202 aa13.48□□□□□ -0.25
TPM1-212ENST00000558347 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
TPM1-212ENST00000558347 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
TPM1-212ENST00000558347 ZNF784Q8NCA9 323 aaPredicted RBP13.48□□□□□ -0.25
TPM1-212ENST00000558347 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
TPM1-212ENST00000558347 BCL2L12Q9HB09 334 aa13.48□□□□□ -0.25
TPM1-212ENST00000558347 POLRMTO00411 1230 aaKnown RBP13.47□□□□□ -0.25
TPM1-212ENST00000558347 NEFMP07197 916 aa13.47□□□□□ -0.25
TPM1-212ENST00000558347 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
TPM1-212ENST00000558347 A0A0G2JLW4 131 aa13.46□□□□□ -0.25
TPM1-212ENST00000558347 A1BGP04217 495 aa13.46□□□□□ -0.25
TPM1-212ENST00000558347 TGFB2P61812 414 aa13.46□□□□□ -0.25
TPM1-212ENST00000558347 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
TPM1-212ENST00000558347 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
TPM1-212ENST00000558347 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.26
TPM1-212ENST00000558347 SCN7AQ01118 1682 aa13.45□□□□□ -0.26
TPM1-212ENST00000558347 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
TPM1-212ENST00000558347 NFIXQ14938 502 aa13.45□□□□□ -0.26
TPM1-212ENST00000558347 TAF7Q15545 349 aaPredicted RBP13.45□□□□□ -0.26
TPM1-212ENST00000558347 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
TPM1-212ENST00000558347 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
TPM1-212ENST00000558347 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
TPM1-212ENST00000558347 NRXN2Q9P2S2 1712 aa13.45□□□□□ -0.26
TPM1-212ENST00000558347 DPEP1P16444 411 aa13.44□□□□□ -0.26
TPM1-212ENST00000558347 IL6STP40189 918 aaPredicted RBP13.44□□□□□ -0.26
TPM1-212ENST00000558347 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
TPM1-212ENST00000558347 KCNA3P22001 575 aa13.44□□□□□ -0.26
TPM1-212ENST00000558347 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
TPM1-212ENST00000558347 PNNQ9H307 717 aaKnown RBP13.44□□□□□ -0.26
TPM1-212ENST00000558347 TBC1D2BQ9UPU7 963 aa13.44□□□□□ -0.26
TPM1-212ENST00000558347 BCORQ6W2J9 1755 aa13.43□□□□□ -0.26
TPM1-212ENST00000558347 A0A087WZG4 1122 aa13.43□□□□□ -0.26
TPM1-212ENST00000558347 SNRPA1P09661 255 aaKnown RBP13.43□□□□□ -0.26
TPM1-212ENST00000558347 WDR43Q15061 677 aaKnown RBP eCLIP13.43□□□□□ -0.26
TPM1-212ENST00000558347 LAMB4A4D0S4 1761 aa13.42□□□□□ -0.26
TPM1-212ENST00000558347 BCS1LQ9Y276 419 aa13.42□□□□□ -0.26
TPM1-212ENST00000558347 SERPINB2P05120 415 aa13.41□□□□□ -0.26
TPM1-212ENST00000558347 TBC1D9BQ66K14 1250 aa13.41□□□□□ -0.26
TPM1-212ENST00000558347 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
TPM1-212ENST00000558347 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
TPM1-212ENST00000558347 ADAMTS8Q9UP79 889 aa13.41□□□□□ -0.26
TPM1-212ENST00000558347 CAMTA2O94983 1202 aa13.4□□□□□ -0.26
TPM1-212ENST00000558347 CHRNA5P30532 468 aa13.4□□□□□ -0.26
TPM1-212ENST00000558347 RIPK4P57078 832 aa13.4□□□□□ -0.26
TPM1-212ENST00000558347 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
TPM1-212ENST00000558347 ARFGEF1Q9Y6D6 1849 aa13.4□□□□□ -0.26
TPM1-212ENST00000558347 CARMIL3Q8ND23 1372 aa13.4□□□□□ -0.26
TPM1-212ENST00000558347 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
TPM1-212ENST00000558347 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
TPM1-212ENST00000558347 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
TPM1-212ENST00000558347 DZIP3Q86Y13 1208 aaKnown RBP13.39□□□□□ -0.27
TPM1-212ENST00000558347 NBPF15Q8N660 670 aa13.39□□□□□ -0.27
TPM1-212ENST00000558347 ADCY9O60503 1353 aa13.39□□□□□ -0.27
TPM1-212ENST00000558347 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
TPM1-212ENST00000558347 NPM2Q86SE8 214 aaKnown RBP13.39□□□□□ -0.27
TPM1-212ENST00000558347 PIM2Q9P1W9 311 aa13.39□□□□□ -0.27
TPM1-212ENST00000558347 RRP7AQ9Y3A4 280 aaKnown RBP13.39□□□□□ -0.27
TPM1-212ENST00000558347 ANKRD31Q8N7Z5 1873 aa13.38□□□□□ -0.27
TPM1-212ENST00000558347 GIGYF1O75420 1035 aaPredicted RBP13.38□□□□□ -0.27
TPM1-212ENST00000558347 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
TPM1-212ENST00000558347 DLEC1Q9Y238 1755 aa13.37□□□□□ -0.27
TPM1-212ENST00000558347 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
TPM1-212ENST00000558347 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
TPM1-212ENST00000558347 NEUROD2Q15784 382 aa13.36□□□□□ -0.27
TPM1-212ENST00000558347 DALRD3Q5D0E6 543 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms