RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 ABCC3O15438 1527 aa9.41□□□□□ -0.9
MARK3-212ENST00000558223 DISP3Q9P2K9 1392 aa9.4□□□□□ -0.9
MARK3-212ENST00000558223 DDX11L8A8MPP1 907 aa9.4□□□□□ -0.9
MARK3-212ENST00000558223 C3orf80F5H4A9 247 aa9.4□□□□□ -0.9
MARK3-212ENST00000558223 PRSS12P56730 875 aa9.4□□□□□ -0.9
MARK3-212ENST00000558223 PACS2Q86VP3 889 aa9.4□□□□□ -0.9
MARK3-212ENST00000558223 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.9
MARK3-212ENST00000558223 ADGRB3O60242 1522 aa9.4□□□□□ -0.91
MARK3-212ENST00000558223 IQGAP1P46940 1657 aa9.39□□□□□ -0.91
MARK3-212ENST00000558223 SYNMO15061 1565 aa9.39□□□□□ -0.91
MARK3-212ENST00000558223 REREQ9P2R6 1566 aa9.39□□□□□ -0.91
MARK3-212ENST00000558223 CYB5RLQ6IPT4 315 aa9.39□□□□□ -0.91
MARK3-212ENST00000558223 TSC1Q92574 1164 aa9.39□□□□□ -0.91
MARK3-212ENST00000558223 RBM27Q9P2N5 1060 aaKnown RBP9.39□□□□□ -0.91
MARK3-212ENST00000558223 PPRC1Q5VV67 1664 aaKnown RBP9.39□□□□□ -0.91
MARK3-212ENST00000558223 FRMPD1Q5SYB0 1578 aa9.38□□□□□ -0.91
MARK3-212ENST00000558223 CENPJQ9HC77 1338 aaPredicted RBP9.38□□□□□ -0.91
MARK3-212ENST00000558223 AGLP35573 1532 aa9.38□□□□□ -0.91
MARK3-212ENST00000558223 SMAPO00193 183 aa9.38□□□□□ -0.91
MARK3-212ENST00000558223 RECKO95980 971 aa9.38□□□□□ -0.91
MARK3-212ENST00000558223 ERCC5P28715 1186 aaPredicted RBP9.38□□□□□ -0.91
MARK3-212ENST00000558223 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
MARK3-212ENST00000558223 WBP1LQ9NX94 342 aa9.38□□□□□ -0.91
MARK3-212ENST00000558223 RNF123Q5XPI4 1314 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 RAPGEF3O95398 923 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 FAM69CQ0P6D2 419 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 TSNAXIP1Q2TAA8 658 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 TTC13Q8NBP0 860 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 LRRN4Q8WUT4 740 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 PIK3C2GO75747 1445 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 NINLQ9Y2I6 1382 aa9.37□□□□□ -0.91
MARK3-212ENST00000558223 ADGRF5Q8IZF2 1346 aa9.36□□□□□ -0.91
MARK3-212ENST00000558223 ABCA6Q8N139 1617 aa9.36□□□□□ -0.91
MARK3-212ENST00000558223 RCCD1A6NED2 376 aa9.36□□□□□ -0.91
MARK3-212ENST00000558223 HDGFP51858 240 aaKnown RBP9.36□□□□□ -0.91
MARK3-212ENST00000558223 ASXL1Q8IXJ9 1541 aa9.36□□□□□ -0.91
MARK3-212ENST00000558223 GIMAP6Q6P9H5 292 aa9.35□□□□□ -0.91
MARK3-212ENST00000558223 DPH6Q7L8W6 267 aa9.35□□□□□ -0.91
MARK3-212ENST00000558223 CLP1Q92989 425 aaKnown RBP9.35□□□□□ -0.91
MARK3-212ENST00000558223 TATDN2Q93075 761 aa9.35□□□□□ -0.91
MARK3-212ENST00000558223 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.35□□□□□ -0.91
MARK3-212ENST00000558223 MYO3AQ8NEV4 1616 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 RICTORQ6R327 1708 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 ITGBL1O95965 494 aaPredicted RBP9.34□□□□□ -0.91
MARK3-212ENST00000558223 FDX1P10109 184 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 ATP2B4P23634 1241 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 WDR43Q15061 677 aaKnown RBP eCLIP9.34□□□□□ -0.91
MARK3-212ENST00000558223 LARP1Q6PKG0 1096 aaKnown RBP9.34□□□□□ -0.91
MARK3-212ENST00000558223 FAM200AQ8TCP9 573 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 LRCH3Q96II8 777 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 CAMSAP1Q5T5Y3 1602 aa9.34□□□□□ -0.91
MARK3-212ENST00000558223 IFT172Q9UG01 1749 aa9.34□□□□□ -0.92
MARK3-212ENST00000558223 ZC3H4Q9UPT8 1303 aaKnown RBP9.33□□□□□ -0.92
MARK3-212ENST00000558223 BLMP54132 1417 aaPredicted RBP9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L3A6NCW0 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L4A6NCW7 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L10C9JJH3 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L21D6R901 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 KDM4AO75164 1064 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 PPP2R1AP30153 589 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L24Q0WX57 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 NOL8Q76FK4 1167 aaKnown RBP9.33□□□□□ -0.92
MARK3-212ENST00000558223 USP17L1Q7RTZ2 530 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 CERS3Q8IU89 383 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 EPS8L1Q8TE68 723 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 TSR3Q9UJK0 312 aaKnown RBP9.33□□□□□ -0.92
MARK3-212ENST00000558223 PNMA3Q9UL41 463 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 HPS5Q9UPZ3 1129 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 PIK3C2BO00750 1634 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 NSD2O96028 1365 aa9.33□□□□□ -0.92
MARK3-212ENST00000558223 KDM5AP29375 1690 aaKnown RBP9.32□□□□□ -0.92
MARK3-212ENST00000558223 SKIP12755 728 aa9.32□□□□□ -0.92
MARK3-212ENST00000558223 IDI1Q13907 227 aa9.32□□□□□ -0.92
MARK3-212ENST00000558223 FBXO33Q7Z6M2 555 aa9.32□□□□□ -0.92
MARK3-212ENST00000558223 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.32□□□□□ -0.92
MARK3-212ENST00000558223 ERVK-7P63135 1459 aa9.32□□□□□ -0.92
MARK3-212ENST00000558223 RIMBP3CA6NJZ7 1639 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 RIMBP3BA6NNM3 1639 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 RIMBP3Q9UFD9 1639 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 TAGLNQ01995 201 aaKnown RBP9.31□□□□□ -0.92
MARK3-212ENST00000558223 NYAP1Q6ZVC0 841 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 NUDT18Q6ZVK8 323 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 SAMD7Q7Z3H4 446 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 SLAIN2Q9P270 581 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 DIP2BQ9P265 1576 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms