RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 RPS6KA4O75676 772 aa11.74□□□□□ -0.53
SPG11-207ENST00000558138 ADRA2BP18089 450 aa11.74□□□□□ -0.53
SPG11-207ENST00000558138 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
SPG11-207ENST00000558138 ZPR1O75312 459 aa11.73□□□□□ -0.53
SPG11-207ENST00000558138 SNRPA1P09661 255 aaKnown RBP11.73□□□□□ -0.53
SPG11-207ENST00000558138 CYP19A1P11511 503 aaPredicted RBP11.73□□□□□ -0.53
SPG11-207ENST00000558138 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
SPG11-207ENST00000558138 ZBTB1Q9Y2K1 713 aa11.73□□□□□ -0.53
SPG11-207ENST00000558138 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
SPG11-207ENST00000558138 AMIGO3Q86WK7 504 aa11.72□□□□□ -0.53
SPG11-207ENST00000558138 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
SPG11-207ENST00000558138 SALL2Q9Y467 1007 aaPredicted RBP11.72□□□□□ -0.53
SPG11-207ENST00000558138 COL15A1P39059 1388 aa11.71□□□□□ -0.53
SPG11-207ENST00000558138 A0A087WZG4 1122 aa11.71□□□□□ -0.53
SPG11-207ENST00000558138 INTS5Q6P9B9 1019 aaKnown RBP11.71□□□□□ -0.53
SPG11-207ENST00000558138 CICQ96RK0 1608 aaPredicted RBP11.71□□□□□ -0.54
SPG11-207ENST00000558138 PRAMEF22A3QJZ6 481 aa11.7□□□□□ -0.54
SPG11-207ENST00000558138 PTGER2P43116 358 aa11.7□□□□□ -0.54
SPG11-207ENST00000558138 SRP68Q9UHB9 627 aaKnown RBP11.7□□□□□ -0.54
SPG11-207ENST00000558138 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
SPG11-207ENST00000558138 USP16Q9Y5T5 823 aa11.7□□□□□ -0.54
SPG11-207ENST00000558138 MYH14Q7Z406 1995 aaKnown RBP11.7□□□□□ -0.54
SPG11-207ENST00000558138 KDM3BQ7LBC6 1761 aa11.69□□□□□ -0.54
SPG11-207ENST00000558138 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
SPG11-207ENST00000558138 A1BGP04217 495 aa11.69□□□□□ -0.54
SPG11-207ENST00000558138 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
SPG11-207ENST00000558138 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
SPG11-207ENST00000558138 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
SPG11-207ENST00000558138 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
SPG11-207ENST00000558138 NGEFQ8N5V2 710 aa11.69□□□□□ -0.54
SPG11-207ENST00000558138 FHDC1Q9C0D6 1143 aaPredicted RBP11.69□□□□□ -0.54
SPG11-207ENST00000558138 PARP3Q9Y6F1 533 aa11.69□□□□□ -0.54
SPG11-207ENST00000558138 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
SPG11-207ENST00000558138 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
SPG11-207ENST00000558138 NPHP1O15259 732 aa11.68□□□□□ -0.54
SPG11-207ENST00000558138 MMP10P09238 476 aa11.68□□□□□ -0.54
SPG11-207ENST00000558138 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
SPG11-207ENST00000558138 EIF4A1P60842 406 aaKnown RBP11.68□□□□□ -0.54
SPG11-207ENST00000558138 BABAM1Q9NWV8 329 aa11.68□□□□□ -0.54
SPG11-207ENST00000558138 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
SPG11-207ENST00000558138 GYS1P13807 737 aa11.67□□□□□ -0.54
SPG11-207ENST00000558138 MYL6BP14649 208 aa11.67□□□□□ -0.54
SPG11-207ENST00000558138 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
SPG11-207ENST00000558138 GNAI1P63096 354 aa11.67□□□□□ -0.54
SPG11-207ENST00000558138 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
SPG11-207ENST00000558138 TBC1D2BQ9UPU7 963 aa11.67□□□□□ -0.54
SPG11-207ENST00000558138 GIGYF1O75420 1035 aaPredicted RBP11.66□□□□□ -0.54
SPG11-207ENST00000558138 BICDL1Q6ZP65 573 aa11.66□□□□□ -0.54
SPG11-207ENST00000558138 DZIP3Q86Y13 1208 aaKnown RBP11.66□□□□□ -0.54
SPG11-207ENST00000558138 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
SPG11-207ENST00000558138 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
SPG11-207ENST00000558138 IFT57Q9NWB7 429 aa11.66□□□□□ -0.54
SPG11-207ENST00000558138 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
SPG11-207ENST00000558138 CCER2I3L3R5 266 aa11.65□□□□□ -0.54
SPG11-207ENST00000558138 CHL1O00533 1208 aa11.65□□□□□ -0.54
SPG11-207ENST00000558138 EIF5P55010 431 aaKnown RBP11.65□□□□□ -0.54
SPG11-207ENST00000558138 FKBP8Q14318 412 aa11.65□□□□□ -0.54
SPG11-207ENST00000558138 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
SPG11-207ENST00000558138 SYT17Q9BSW7 474 aa11.65□□□□□ -0.54
SPG11-207ENST00000558138 MBIPQ9NS73 344 aa11.65□□□□□ -0.54
SPG11-207ENST00000558138 HDGFL1Q5TGJ6 251 aa11.64□□□□□ -0.55
SPG11-207ENST00000558138 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
SPG11-207ENST00000558138 WWC1Q8IX03 1113 aa11.63□□□□□ -0.55
SPG11-207ENST00000558138 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
SPG11-207ENST00000558138 GPR162Q16538 588 aa11.62□□□□□ -0.55
SPG11-207ENST00000558138 CCDC27Q2M243 656 aa11.62□□□□□ -0.55
SPG11-207ENST00000558138 KRT24Q2M2I5 525 aa11.62□□□□□ -0.55
SPG11-207ENST00000558138 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
SPG11-207ENST00000558138 MIER1Q8N108 512 aa11.62□□□□□ -0.55
SPG11-207ENST00000558138 TSR2Q969E8 191 aaKnown RBP11.62□□□□□ -0.55
SPG11-207ENST00000558138 WWC3Q9ULE0 1092 aa11.62□□□□□ -0.55
SPG11-207ENST00000558138 SRCAPQ6ZRS2 3230 aa11.62□□□□□ -0.55
SPG11-207ENST00000558138 COL24A1Q17RW2 1714 aa11.62□□□□□ -0.55
SPG11-207ENST00000558138 ERBB4Q15303 1308 aa11.61□□□□□ -0.55
SPG11-207ENST00000558138 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
SPG11-207ENST00000558138 AIMP1Q12904 312 aaKnown RBP11.61□□□□□ -0.55
SPG11-207ENST00000558138 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
SPG11-207ENST00000558138 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
SPG11-207ENST00000558138 NLGN2Q8NFZ4 835 aa11.61□□□□□ -0.55
SPG11-207ENST00000558138 SETDB2Q96T68 719 aa11.61□□□□□ -0.55
SPG11-207ENST00000558138 CD2APQ9Y5K6 639 aa11.61□□□□□ -0.55
SPG11-207ENST00000558138 SCN7AQ01118 1682 aa11.61□□□□□ -0.55
SPG11-207ENST00000558138 FAM177BA6PVY3 158 aa11.6□□□□□ -0.55
SPG11-207ENST00000558138 ANXA1P04083 346 aa11.6□□□□□ -0.55
SPG11-207ENST00000558138 HOXB7P09629 217 aa11.6□□□□□ -0.55
SPG11-207ENST00000558138 NFIXQ14938 502 aa11.6□□□□□ -0.55
SPG11-207ENST00000558138 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
SPG11-207ENST00000558138 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
SPG11-207ENST00000558138 ZBTB3Q9H5J0 574 aa11.6□□□□□ -0.55
SPG11-207ENST00000558138 CARMIL3Q8ND23 1372 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 POLRMTO00411 1230 aaKnown RBP11.59□□□□□ -0.55
SPG11-207ENST00000558138 CAMTA2O94983 1202 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 SERPINB2P05120 415 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 ZNF853P0CG23 659 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 GTF2E1P29083 439 aaPredicted RBP11.59□□□□□ -0.55
SPG11-207ENST00000558138 DDR1Q08345 913 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 BCL2L12Q9HB09 334 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 CHPF2Q9P2E5 772 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms