RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 MRS2Q9HD23 443 aa26.01■■□□□ 1.75
HIF1A-211ENST00000557446 PNISRQ8TF01 805 aaKnown RBP26■■□□□ 1.75
HIF1A-211ENST00000557446 MIS18AQ9NYP9 233 aa26■■□□□ 1.75
HIF1A-211ENST00000557446 ZBTB1Q9Y2K1 713 aa26■■□□□ 1.75
HIF1A-211ENST00000557446 SOS1Q07889 1333 aaPredicted RBP25.99■■□□□ 1.75
HIF1A-211ENST00000557446 STARD3NLO95772 234 aa25.99■■□□□ 1.75
HIF1A-211ENST00000557446 RFC4P35249 363 aa25.99■■□□□ 1.75
HIF1A-211ENST00000557446 FHDC1Q9C0D6 1143 aaPredicted RBP25.99■■□□□ 1.75
HIF1A-211ENST00000557446 TEX13AQ9BXU3 409 aaPredicted RBP25.98■■□□□ 1.75
HIF1A-211ENST00000557446 COL15A1P39059 1388 aa25.96■■□□□ 1.75
HIF1A-211ENST00000557446 KLHL34Q8N239 644 aa25.96■■□□□ 1.75
HIF1A-211ENST00000557446 CANXP27824 592 aaKnown RBP25.95■■□□□ 1.74
HIF1A-211ENST00000557446 USP42Q9H9J4 1324 aaKnown RBP25.94■■□□□ 1.74
HIF1A-211ENST00000557446 PRAMEF22A3QJZ6 481 aa25.94■■□□□ 1.74
HIF1A-211ENST00000557446 SNRPA1P09661 255 aaKnown RBP25.94■■□□□ 1.74
HIF1A-211ENST00000557446 TRIM35Q9UPQ4 493 aa25.94■■□□□ 1.74
HIF1A-211ENST00000557446 APAF1O14727 1248 aa25.93■■□□□ 1.74
HIF1A-211ENST00000557446 SYT17Q9BSW7 474 aa25.93■■□□□ 1.74
HIF1A-211ENST00000557446 SRP68Q9UHB9 627 aaKnown RBP25.93■■□□□ 1.74
HIF1A-211ENST00000557446 GYS1P13807 737 aa25.92■■□□□ 1.74
HIF1A-211ENST00000557446 TSPYL4Q9UJ04 414 aa25.92■■□□□ 1.74
HIF1A-211ENST00000557446 USP16Q9Y5T5 823 aa25.92■■□□□ 1.74
HIF1A-211ENST00000557446 SCN7AQ01118 1682 aa25.92■■□□□ 1.74
HIF1A-211ENST00000557446 A1BGP04217 495 aa25.9■■□□□ 1.74
HIF1A-211ENST00000557446 EIF4A1P60842 406 aaKnown RBP25.9■■□□□ 1.74
HIF1A-211ENST00000557446 NLGN1Q8N2Q7 840 aa25.9■■□□□ 1.74
HIF1A-211ENST00000557446 MMP10P09238 476 aa25.89■■□□□ 1.74
HIF1A-211ENST00000557446 ZNF330Q9Y3S2 320 aaPredicted RBP25.89■■□□□ 1.74
HIF1A-211ENST00000557446 ZPR1O75312 459 aa25.88■■□□□ 1.73
HIF1A-211ENST00000557446 EIF5P55010 431 aaKnown RBP25.88■■□□□ 1.73
HIF1A-211ENST00000557446 BCORQ6W2J9 1755 aa25.87■■□□□ 1.73
HIF1A-211ENST00000557446 IL6STP40189 918 aaPredicted RBP25.87■■□□□ 1.73
HIF1A-211ENST00000557446 USPL1Q5W0Q7 1092 aa25.87■■□□□ 1.73
HIF1A-211ENST00000557446 BABAM1Q9NWV8 329 aa25.87■■□□□ 1.73
HIF1A-211ENST00000557446 NARFQ9UHQ1 456 aa25.87■■□□□ 1.73
HIF1A-211ENST00000557446 GIGYF1O75420 1035 aaPredicted RBP25.86■■□□□ 1.73
HIF1A-211ENST00000557446 FKBP8Q14318 412 aa25.86■■□□□ 1.73
HIF1A-211ENST00000557446 A0A087WZG4 1122 aa25.85■■□□□ 1.73
HIF1A-211ENST00000557446 PIP4K2AP48426 406 aaPredicted RBP25.85■■□□□ 1.73
HIF1A-211ENST00000557446 LAS1LQ9Y4W2 734 aaKnown RBP25.84■■□□□ 1.73
HIF1A-211ENST00000557446 KIF13BQ9NQT8 1826 aa25.84■■□□□ 1.73
HIF1A-211ENST00000557446 NPM2Q86SE8 214 aaKnown RBP25.83■■□□□ 1.73
HIF1A-211ENST00000557446 NLGN2Q8NFZ4 835 aa25.83■■□□□ 1.73
HIF1A-211ENST00000557446 CHL1O00533 1208 aa25.82■■□□□ 1.72
HIF1A-211ENST00000557446 CD2APQ9Y5K6 639 aa25.81■■□□□ 1.72
HIF1A-211ENST00000557446 PARP3Q9Y6F1 533 aa25.81■■□□□ 1.72
HIF1A-211ENST00000557446 SENP3-EIF4A1A0A087X0R7 540 aa25.8■■□□□ 1.72
HIF1A-211ENST00000557446 NBPF26B4DH59 902 aa25.8■■□□□ 1.72
HIF1A-211ENST00000557446 NBPF10Q6P3W6 841 aaKnown RBP25.8■■□□□ 1.72
HIF1A-211ENST00000557446 NBPF15Q8N660 670 aa25.8■■□□□ 1.72
HIF1A-211ENST00000557446 BCL2L12Q9HB09 334 aa25.8■■□□□ 1.72
HIF1A-211ENST00000557446 TBC1D2BQ9UPU7 963 aa25.8■■□□□ 1.72
HIF1A-211ENST00000557446 C10orf71Q711Q0 1435 aa25.8■■□□□ 1.72
HIF1A-211ENST00000557446 AFDNP55196 1824 aaKnown RBP25.79■■□□□ 1.72
HIF1A-211ENST00000557446 DCAF8L1A6NGE4 600 aa25.79■■□□□ 1.72
HIF1A-211ENST00000557446 DDR1Q08345 913 aa25.79■■□□□ 1.72
HIF1A-211ENST00000557446 FAM9BQ8IZU0 186 aa25.79■■□□□ 1.72
HIF1A-211ENST00000557446 CFAP44Q96MT7 982 aa25.79■■□□□ 1.72
HIF1A-211ENST00000557446 CALD1Q05682 793 aaKnown RBP25.78■■□□□ 1.72
HIF1A-211ENST00000557446 DZIP3Q86Y13 1208 aaKnown RBP25.78■■□□□ 1.72
HIF1A-211ENST00000557446 KIAA1551Q9HCM1 1747 aa25.77■■□□□ 1.72
HIF1A-211ENST00000557446 NRXN2Q9P2S2 1712 aa25.77■■□□□ 1.72
HIF1A-211ENST00000557446 TM4SF1P30408 202 aa25.76■■□□□ 1.71
HIF1A-211ENST00000557446 NFIXQ14938 502 aa25.76■■□□□ 1.71
HIF1A-211ENST00000557446 POLRMTO00411 1230 aaKnown RBP25.75■■□□□ 1.71
HIF1A-211ENST00000557446 CAMTA2O94983 1202 aa25.75■■□□□ 1.71
HIF1A-211ENST00000557446 MBIPQ9NS73 344 aa25.75■■□□□ 1.71
HIF1A-211ENST00000557446 IFT57Q9NWB7 429 aa25.75■■□□□ 1.71
HIF1A-211ENST00000557446 N4BP2Q86UW6 1770 aaPredicted RBP25.74■■□□□ 1.71
HIF1A-211ENST00000557446 ERBB4Q15303 1308 aa25.74■■□□□ 1.71
HIF1A-211ENST00000557446 GNAI1P63096 354 aa25.74■■□□□ 1.71
HIF1A-211ENST00000557446 CCDC27Q2M243 656 aa25.74■■□□□ 1.71
HIF1A-211ENST00000557446 KRT24Q2M2I5 525 aa25.74■■□□□ 1.71
HIF1A-211ENST00000557446 ZNF853P0CG23 659 aa25.73■■□□□ 1.71
HIF1A-211ENST00000557446 EIF2S2P20042 333 aaKnown RBP25.73■■□□□ 1.71
HIF1A-211ENST00000557446 PXDNLA1KZ92 1463 aa25.72■■□□□ 1.71
HIF1A-211ENST00000557446 TBC1D9BQ66K14 1250 aa25.72■■□□□ 1.71
HIF1A-211ENST00000557446 BICDL1Q6ZP65 573 aa25.72■■□□□ 1.71
HIF1A-211ENST00000557446 MYL6BP14649 208 aa25.71■■□□□ 1.71
HIF1A-211ENST00000557446 WWC1Q8IX03 1113 aa25.71■■□□□ 1.71
HIF1A-211ENST00000557446 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
HIF1A-211ENST00000557446 NGEFQ8N5V2 710 aa25.7■■□□□ 1.7
HIF1A-211ENST00000557446 GPR162Q16538 588 aa25.69■■□□□ 1.7
HIF1A-211ENST00000557446 NCBP3Q53F19 620 aaKnown RBP25.69■■□□□ 1.7
HIF1A-211ENST00000557446 NECTIN2Q92692 538 aa25.69■■□□□ 1.7
HIF1A-211ENST00000557446 SALL2Q9Y467 1007 aaPredicted RBP25.69■■□□□ 1.7
HIF1A-211ENST00000557446 BRCA1P38398 1863 aaKnown RBP25.68■■□□□ 1.7
HIF1A-211ENST00000557446 NUP98P52948 1817 aa25.68■■□□□ 1.7
HIF1A-211ENST00000557446 SERPINB2P05120 415 aa25.68■■□□□ 1.7
HIF1A-211ENST00000557446 HOXB7P09629 217 aa25.68■■□□□ 1.7
HIF1A-211ENST00000557446 ZNF652Q9Y2D9 606 aa25.68■■□□□ 1.7
HIF1A-211ENST00000557446 CARMIL3Q8ND23 1372 aa25.68■■□□□ 1.7
HIF1A-211ENST00000557446 TGFB2P61812 414 aa25.66■■□□□ 1.7
HIF1A-211ENST00000557446 PDIA6Q15084 440 aa25.66■■□□□ 1.7
HIF1A-211ENST00000557446 DUSP27Q5VZP5 1158 aa25.66■■□□□ 1.7
HIF1A-211ENST00000557446 CLEC4GQ6UXB4 293 aa25.66■■□□□ 1.7
HIF1A-211ENST00000557446 CCER2I3L3R5 266 aa25.65■■□□□ 1.7
HIF1A-211ENST00000557446 ANXA1P04083 346 aa25.65■■□□□ 1.7
HIF1A-211ENST00000557446 PROSER3Q2NL68 480 aa25.65■■□□□ 1.7
HIF1A-211ENST00000557446 HDGFL1Q5TGJ6 251 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms