RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 RHOQP17081 205 aa9.37□□□□□ -0.91
HIF1A-210ENST00000557206 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
HIF1A-210ENST00000557206 C4orf17Q53FE4 359 aa9.37□□□□□ -0.91
HIF1A-210ENST00000557206 NBPF10Q6P3W6 841 aaKnown RBP9.37□□□□□ -0.91
HIF1A-210ENST00000557206 TRAIPQ9BWF2 469 aa9.37□□□□□ -0.91
HIF1A-210ENST00000557206 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.37□□□□□ -0.91
HIF1A-210ENST00000557206 SOBPA7XYQ1 873 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 FOXO3O43524 673 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 NOS2P35228 1153 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 TEAD4Q15561 434 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 TIMMDC1Q9NPL8 285 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 CXXC1Q9P0U4 656 aaPredicted RBP9.36□□□□□ -0.91
HIF1A-210ENST00000557206 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
HIF1A-210ENST00000557206 C21orf2O43822 256 aa9.35□□□□□ -0.91
HIF1A-210ENST00000557206 NBPF1Q3BBV0 1214 aa9.35□□□□□ -0.91
HIF1A-210ENST00000557206 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
HIF1A-210ENST00000557206 OCLNQ16625 522 aa9.34□□□□□ -0.91
HIF1A-210ENST00000557206 STAG2Q8N3U4 1231 aa9.34□□□□□ -0.91
HIF1A-210ENST00000557206 BRD1O95696 1058 aa9.33□□□□□ -0.92
HIF1A-210ENST00000557206 SNRPBP14678 240 aaKnown RBP9.33□□□□□ -0.92
HIF1A-210ENST00000557206 SSFA2P28290 1259 aa9.33□□□□□ -0.92
HIF1A-210ENST00000557206 MKNK1Q9BUB5 465 aa9.33□□□□□ -0.92
HIF1A-210ENST00000557206 C2orf49Q9BVC5 232 aaPredicted RBP9.33□□□□□ -0.92
HIF1A-210ENST00000557206 MTMR7Q9Y216 660 aa9.33□□□□□ -0.92
HIF1A-210ENST00000557206 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
HIF1A-210ENST00000557206 PTCD1O75127 700 aaKnown RBP9.32□□□□□ -0.92
HIF1A-210ENST00000557206 TATP17735 454 aaPredicted RBP9.32□□□□□ -0.92
HIF1A-210ENST00000557206 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
HIF1A-210ENST00000557206 NGLY1Q96IV0 654 aa9.32□□□□□ -0.92
HIF1A-210ENST00000557206 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
HIF1A-210ENST00000557206 SLAIN2Q9P270 581 aa9.32□□□□□ -0.92
HIF1A-210ENST00000557206 HCN4Q9Y3Q4 1203 aa9.32□□□□□ -0.92
HIF1A-210ENST00000557206 PTSQ03393 145 aa9.31□□□□□ -0.92
HIF1A-210ENST00000557206 ZDHHC1Q8WTX9 485 aa9.31□□□□□ -0.92
HIF1A-210ENST00000557206 DYRK1BQ9Y463 629 aa9.31□□□□□ -0.92
HIF1A-210ENST00000557206 EML1O00423 815 aa9.3□□□□□ -0.92
HIF1A-210ENST00000557206 LCE2AQ5TA79 106 aaPredicted RBP9.3□□□□□ -0.92
HIF1A-210ENST00000557206 BICDL1Q6ZP65 573 aa9.3□□□□□ -0.92
HIF1A-210ENST00000557206 AEBP1Q8IUX7 1158 aa9.3□□□□□ -0.92
HIF1A-210ENST00000557206 C1orf216Q8TAB5 229 aa9.3□□□□□ -0.92
HIF1A-210ENST00000557206 HIRAP54198 1017 aaPredicted RBP9.29□□□□□ -0.92
HIF1A-210ENST00000557206 ARSJQ5FYB0 599 aaPredicted RBP9.29□□□□□ -0.92
HIF1A-210ENST00000557206 SH3PXD2AQ5TCZ1 1133 aa9.29□□□□□ -0.92
HIF1A-210ENST00000557206 ALDH16A1Q8IZ83 802 aa9.29□□□□□ -0.92
HIF1A-210ENST00000557206 ZNF295-AS1Q8N0V1 137 aa9.29□□□□□ -0.92
HIF1A-210ENST00000557206 PGBD3Q8N328 593 aa9.29□□□□□ -0.92
HIF1A-210ENST00000557206 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
HIF1A-210ENST00000557206 NEUROD4Q9HD90 331 aa9.29□□□□□ -0.92
HIF1A-210ENST00000557206 ZDHHC3Q9NYG2 299 aa9.29□□□□□ -0.92
HIF1A-210ENST00000557206 PATL2C9JE40 543 aaKnown RBP9.28□□□□□ -0.92
HIF1A-210ENST00000557206 F11P03951 625 aa9.28□□□□□ -0.92
HIF1A-210ENST00000557206 ARID4AP29374 1257 aaPredicted RBP9.28□□□□□ -0.92
HIF1A-210ENST00000557206 RIPOR1Q6ZS17 1223 aa9.28□□□□□ -0.92
HIF1A-210ENST00000557206 RHPN1Q8TCX5 695 aa9.28□□□□□ -0.92
HIF1A-210ENST00000557206 COL26A1Q96A83 441 aa9.28□□□□□ -0.92
HIF1A-210ENST00000557206 PHACTR1Q9C0D0 580 aa9.28□□□□□ -0.92
HIF1A-210ENST00000557206 GPAMQ9HCL2 828 aa9.28□□□□□ -0.92
HIF1A-210ENST00000557206 MSX1P28360 303 aa9.27□□□□□ -0.93
HIF1A-210ENST00000557206 TXLNAP40222 546 aa9.27□□□□□ -0.93
HIF1A-210ENST00000557206 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
HIF1A-210ENST00000557206 C1orf53Q5VUE5 145 aa9.27□□□□□ -0.93
HIF1A-210ENST00000557206 PHLDB3Q6NSJ2 640 aa9.27□□□□□ -0.93
HIF1A-210ENST00000557206 CCDC155Q8N6L0 562 aa9.27□□□□□ -0.93
HIF1A-210ENST00000557206 CCER1Q8TC90 406 aaPredicted RBP9.27□□□□□ -0.93
HIF1A-210ENST00000557206 SLC35F4A4IF30 521 aa9.26□□□□□ -0.93
HIF1A-210ENST00000557206 POTEAQ6S8J7 498 aa9.26□□□□□ -0.93
HIF1A-210ENST00000557206 GJA3Q9Y6H8 435 aa9.26□□□□□ -0.93
HIF1A-210ENST00000557206 SENP3-EIF4A1A0A087X0R7 540 aa9.25□□□□□ -0.93
HIF1A-210ENST00000557206 H7C1W4 665 aa9.25□□□□□ -0.93
HIF1A-210ENST00000557206 KCNA1Q09470 495 aa9.25□□□□□ -0.93
HIF1A-210ENST00000557206 C16orf46Q6P387 395 aa9.25□□□□□ -0.93
HIF1A-210ENST00000557206 WFS1O76024 890 aa9.24□□□□□ -0.93
HIF1A-210ENST00000557206 SCNN1AP37088 669 aa9.24□□□□□ -0.93
HIF1A-210ENST00000557206 HIF1AQ16665 826 aa9.24□□□□□ -0.93
HIF1A-210ENST00000557206 RTN1Q16799 776 aa9.24□□□□□ -0.93
HIF1A-210ENST00000557206 EFHC2Q5JST6 749 aa9.24□□□□□ -0.93
HIF1A-210ENST00000557206 RUBCNLQ9H714 662 aa9.24□□□□□ -0.93
HIF1A-210ENST00000557206 ABL1P00519 1130 aa9.23□□□□□ -0.93
HIF1A-210ENST00000557206 CAPN12Q6ZSI9 719 aa9.23□□□□□ -0.93
HIF1A-210ENST00000557206 ANKIB1Q9P2G1 1089 aa9.23□□□□□ -0.93
HIF1A-210ENST00000557206 SEPT3Q9UH03 358 aa9.23□□□□□ -0.93
HIF1A-210ENST00000557206 GPC6Q9Y625 555 aaPredicted RBP9.23□□□□□ -0.93
HIF1A-210ENST00000557206 A0A1W2PNR3 127 aa9.22□□□□□ -0.93
HIF1A-210ENST00000557206 ATP4AP20648 1035 aa9.22□□□□□ -0.93
HIF1A-210ENST00000557206 ITGA6P23229 1130 aa9.22□□□□□ -0.93
HIF1A-210ENST00000557206 GTF3C2Q8WUA4 911 aaPredicted RBP9.22□□□□□ -0.93
HIF1A-210ENST00000557206 QTRT2Q9H974 415 aaKnown RBP9.22□□□□□ -0.93
HIF1A-210ENST00000557206 PPFIA3O75145 1194 aa9.21□□□□□ -0.94
HIF1A-210ENST00000557206 DGKZQ13574 1117 aa9.21□□□□□ -0.94
HIF1A-210ENST00000557206 C11orf91Q3C1V1 193 aa9.21□□□□□ -0.94
HIF1A-210ENST00000557206 COX20Q5RI15 118 aa9.21□□□□□ -0.94
HIF1A-210ENST00000557206 MYO19Q96H55 970 aa9.21□□□□□ -0.94
HIF1A-210ENST00000557206 ZIC5Q96T25 663 aa9.21□□□□□ -0.94
HIF1A-210ENST00000557206 NUCKS1Q9H1E3 243 aaKnown RBP9.21□□□□□ -0.94
HIF1A-210ENST00000557206 CRISPLD1Q9H336 500 aa9.21□□□□□ -0.94
HIF1A-210ENST00000557206 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
HIF1A-210ENST00000557206 GMCL1Q96IK5 515 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms