RNA–Protein interactions for RNA: ENST00000556705.5

SRP54-AS1-204, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 2 BASIC

Gene SRP54-AS1, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-204ENST00000556705 NFE2L2Q16236 605 aa17.55■□□□□ 0.4
SRP54-AS1-204ENST00000556705 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
SRP54-AS1-204ENST00000556705 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
SRP54-AS1-204ENST00000556705 PNNQ9H307 717 aaKnown RBP17.55■□□□□ 0.4
SRP54-AS1-204ENST00000556705 KIF13BQ9NQT8 1826 aa17.54■□□□□ 0.4
SRP54-AS1-204ENST00000556705 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
SRP54-AS1-204ENST00000556705 FKBP8Q14318 412 aa17.54■□□□□ 0.4
SRP54-AS1-204ENST00000556705 STARD3NLO95772 234 aa17.53■□□□□ 0.4
SRP54-AS1-204ENST00000556705 YY1P25490 414 aa17.53■□□□□ 0.4
SRP54-AS1-204ENST00000556705 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
SRP54-AS1-204ENST00000556705 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
SRP54-AS1-204ENST00000556705 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
SRP54-AS1-204ENST00000556705 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
SRP54-AS1-204ENST00000556705 MIS18AQ9NYP9 233 aa17.52■□□□□ 0.4
SRP54-AS1-204ENST00000556705 COL15A1P39059 1388 aa17.52■□□□□ 0.39
SRP54-AS1-204ENST00000556705 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 ZPR1O75312 459 aa17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 EIF5P55010 431 aaKnown RBP17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 CNKSR2Q8WXI2 1034 aa17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 THUMPD2Q9BTF0 503 aaKnown RBP17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 NARFQ9UHQ1 456 aa17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 USP16Q9Y5T5 823 aa17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
SRP54-AS1-204ENST00000556705 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
SRP54-AS1-204ENST00000556705 UTRNP46939 3433 aa17.5■□□□□ 0.39
SRP54-AS1-204ENST00000556705 A1BGP04217 495 aa17.5■□□□□ 0.39
SRP54-AS1-204ENST00000556705 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
SRP54-AS1-204ENST00000556705 AFDNP55196 1824 aaKnown RBP17.49■□□□□ 0.39
SRP54-AS1-204ENST00000556705 ZNF316A6NFI3 1004 aaPredicted RBP17.49■□□□□ 0.39
SRP54-AS1-204ENST00000556705 TM4SF1P30408 202 aa17.49■□□□□ 0.39
SRP54-AS1-204ENST00000556705 DDR1Q08345 913 aa17.49■□□□□ 0.39
SRP54-AS1-204ENST00000556705 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
SRP54-AS1-204ENST00000556705 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
SRP54-AS1-204ENST00000556705 SNRPA1P09661 255 aaKnown RBP17.48■□□□□ 0.39
SRP54-AS1-204ENST00000556705 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
SRP54-AS1-204ENST00000556705 RIPK4P57078 832 aa17.48■□□□□ 0.39
SRP54-AS1-204ENST00000556705 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
SRP54-AS1-204ENST00000556705 WWC3Q9ULE0 1092 aa17.48■□□□□ 0.39
SRP54-AS1-204ENST00000556705 ADAMTS8Q9UP79 889 aa17.48■□□□□ 0.39
SRP54-AS1-204ENST00000556705 GOLGB1Q14789 3259 aaKnown RBP17.48■□□□□ 0.39
SRP54-AS1-204ENST00000556705 IL6STP40189 918 aaPredicted RBP17.47■□□□□ 0.39
SRP54-AS1-204ENST00000556705 ZNF330Q9Y3S2 320 aaPredicted RBP17.47■□□□□ 0.39
SRP54-AS1-204ENST00000556705 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
SRP54-AS1-204ENST00000556705 A0A087WZG4 1122 aa17.46■□□□□ 0.39
SRP54-AS1-204ENST00000556705 POLRMTO00411 1230 aaKnown RBP17.46■□□□□ 0.39
SRP54-AS1-204ENST00000556705 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.39
SRP54-AS1-204ENST00000556705 PNISRQ8TF01 805 aaKnown RBP17.46■□□□□ 0.39
SRP54-AS1-204ENST00000556705 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
SRP54-AS1-204ENST00000556705 RRP7AQ9Y3A4 280 aaKnown RBP17.46■□□□□ 0.39
SRP54-AS1-204ENST00000556705 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
SRP54-AS1-204ENST00000556705 A0A0G2JLW4 131 aa17.45■□□□□ 0.38
SRP54-AS1-204ENST00000556705 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
SRP54-AS1-204ENST00000556705 TGFB2P61812 414 aa17.45■□□□□ 0.38
SRP54-AS1-204ENST00000556705 NFIXQ14938 502 aa17.45■□□□□ 0.38
SRP54-AS1-204ENST00000556705 RUNDC1Q96C34 613 aa17.45■□□□□ 0.38
SRP54-AS1-204ENST00000556705 BRCA1P38398 1863 aaKnown RBP17.44■□□□□ 0.38
SRP54-AS1-204ENST00000556705 LAMB4A4D0S4 1761 aa17.44■□□□□ 0.38
SRP54-AS1-204ENST00000556705 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
SRP54-AS1-204ENST00000556705 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
SRP54-AS1-204ENST00000556705 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
SRP54-AS1-204ENST00000556705 NRXN2Q9P2S2 1712 aa17.43■□□□□ 0.38
SRP54-AS1-204ENST00000556705 NBPF26B4DH59 902 aa17.42■□□□□ 0.38
SRP54-AS1-204ENST00000556705 DPEP1P16444 411 aa17.42■□□□□ 0.38
SRP54-AS1-204ENST00000556705 CCDC184Q52MB2 194 aa17.42■□□□□ 0.38
SRP54-AS1-204ENST00000556705 NBPF10Q6P3W6 841 aaKnown RBP17.42■□□□□ 0.38
SRP54-AS1-204ENST00000556705 BICDL1Q6ZP65 573 aa17.42■□□□□ 0.38
SRP54-AS1-204ENST00000556705 NBPF15Q8N660 670 aa17.42■□□□□ 0.38
SRP54-AS1-204ENST00000556705 BCORQ6W2J9 1755 aa17.42■□□□□ 0.38
SRP54-AS1-204ENST00000556705 GIGYF1O75420 1035 aaPredicted RBP17.41■□□□□ 0.38
SRP54-AS1-204ENST00000556705 CAMTA2O94983 1202 aa17.41■□□□□ 0.38
SRP54-AS1-204ENST00000556705 SERPINB2P05120 415 aa17.41■□□□□ 0.38
SRP54-AS1-204ENST00000556705 KCNA3P22001 575 aa17.41■□□□□ 0.38
SRP54-AS1-204ENST00000556705 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
SRP54-AS1-204ENST00000556705 TBC1D9BQ66K14 1250 aa17.41■□□□□ 0.38
SRP54-AS1-204ENST00000556705 DZIP3Q86Y13 1208 aaKnown RBP17.41■□□□□ 0.38
SRP54-AS1-204ENST00000556705 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
SRP54-AS1-204ENST00000556705 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
SRP54-AS1-204ENST00000556705 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
SRP54-AS1-204ENST00000556705 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
SRP54-AS1-204ENST00000556705 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
SRP54-AS1-204ENST00000556705 ARFGEF1Q9Y6D6 1849 aa17.37■□□□□ 0.37
SRP54-AS1-204ENST00000556705 CHRNA5P30532 468 aa17.37■□□□□ 0.37
SRP54-AS1-204ENST00000556705 BABAM1Q9NWV8 329 aa17.37■□□□□ 0.37
SRP54-AS1-204ENST00000556705 BCS1LQ9Y276 419 aa17.37■□□□□ 0.37
SRP54-AS1-204ENST00000556705 ANKRD31Q8N7Z5 1873 aa17.37■□□□□ 0.37
SRP54-AS1-204ENST00000556705 NUP98P52948 1817 aa17.35■□□□□ 0.37
SRP54-AS1-204ENST00000556705 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
SRP54-AS1-204ENST00000556705 PIM2Q9P1W9 311 aa17.35■□□□□ 0.37
SRP54-AS1-204ENST00000556705 CARMIL3Q8ND23 1372 aa17.35■□□□□ 0.37
SRP54-AS1-204ENST00000556705 CHL1O00533 1208 aa17.34■□□□□ 0.37
SRP54-AS1-204ENST00000556705 APAF1O14727 1248 aa17.34■□□□□ 0.37
SRP54-AS1-204ENST00000556705 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
SRP54-AS1-204ENST00000556705 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
SRP54-AS1-204ENST00000556705 SETDB2Q96T68 719 aa17.34■□□□□ 0.37
SRP54-AS1-204ENST00000556705 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
SRP54-AS1-204ENST00000556705 LAS1LQ9Y4W2 734 aaKnown RBP17.34■□□□□ 0.37
SRP54-AS1-204ENST00000556705 ANP32CO43423 234 aa17.33■□□□□ 0.36
SRP54-AS1-204ENST00000556705 MYL6BP14649 208 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms