RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-208ENST00000556658 ABCC4O15439 1325 aa25.28■■□□□ 1.64
RGMA-208ENST00000556658 ONECUT3O60422 494 aaPredicted RBP25.27■■□□□ 1.64
RGMA-208ENST00000556658 CHMP4BQ9H444 224 aaKnown RBP25.27■■□□□ 1.64
RGMA-208ENST00000556658 PTCD1O75127 700 aaKnown RBP25.26■■□□□ 1.63
RGMA-208ENST00000556658 FKBP5Q13451 457 aaPredicted RBP25.26■■□□□ 1.63
RGMA-208ENST00000556658 ATG3Q9NT62 314 aa25.26■■□□□ 1.63
RGMA-208ENST00000556658 ASAP1Q9ULH1 1129 aa25.26■■□□□ 1.63
RGMA-208ENST00000556658 KCPQ6ZWJ8 1503 aa25.25■■□□□ 1.63
RGMA-208ENST00000556658 ZNF772Q68DY9 489 aaPredicted RBP25.25■■□□□ 1.63
RGMA-208ENST00000556658 HYPKQ9NX55 129 aa25.25■■□□□ 1.63
RGMA-208ENST00000556658 DDX21Q9NR30 783 aaKnown RBP eCLIP25.24■■□□□ 1.63
RGMA-208ENST00000556658 USP16Q9Y5T5 823 aa25.24■■□□□ 1.63
RGMA-208ENST00000556658 LAMB4A4D0S4 1761 aa25.24■■□□□ 1.63
RGMA-208ENST00000556658 ACSBG1Q96GR2 724 aa25.23■■□□□ 1.63
RGMA-208ENST00000556658 PHAXQ9H814 394 aaKnown RBP25.23■■□□□ 1.63
RGMA-208ENST00000556658 RGS12O14924 1447 aa25.23■■□□□ 1.63
RGMA-208ENST00000556658 VSIG10Q8N0Z9 540 aa25.22■■□□□ 1.63
RGMA-208ENST00000556658 INTS3Q68E01 1043 aaKnown RBP25.21■■□□□ 1.63
RGMA-208ENST00000556658 SEPT12Q8IYM1 358 aa25.21■■□□□ 1.63
RGMA-208ENST00000556658 TEX13AQ9BXU3 409 aaPredicted RBP25.21■■□□□ 1.63
RGMA-208ENST00000556658 RBM42Q9BTD8 480 aaKnown RBP25.2■■□□□ 1.62
RGMA-208ENST00000556658 ANXA1P04083 346 aa25.19■■□□□ 1.62
RGMA-208ENST00000556658 CCT4P50991 539 aaKnown RBP25.19■■□□□ 1.62
RGMA-208ENST00000556658 PDIA6Q15084 440 aa25.19■■□□□ 1.62
RGMA-208ENST00000556658 SLC4A10Q6U841 1118 aa25.19■■□□□ 1.62
RGMA-208ENST00000556658 ERBB4Q15303 1308 aa25.19■■□□□ 1.62
RGMA-208ENST00000556658 F6X3S4 739 aa25.18■■□□□ 1.62
RGMA-208ENST00000556658 PROSER3Q2NL68 480 aa25.18■■□□□ 1.62
RGMA-208ENST00000556658 ZBTB7BO15156 539 aaPredicted RBP25.17■■□□□ 1.62
RGMA-208ENST00000556658 DDX58O95786 925 aaKnown RBP25.17■■□□□ 1.62
RGMA-208ENST00000556658 MYL6BP14649 208 aa25.17■■□□□ 1.62
RGMA-208ENST00000556658 ZBTB40Q9NUA8 1239 aa25.16■■□□□ 1.62
RGMA-208ENST00000556658 STARD3NLO95772 234 aa25.15■■□□□ 1.62
RGMA-208ENST00000556658 RBM6P78332 1123 aaKnown RBP25.15■■□□□ 1.62
RGMA-208ENST00000556658 SMARCC1Q92922 1105 aaPredicted RBP25.15■■□□□ 1.62
RGMA-208ENST00000556658 KCNQ2O43526 872 aa25.14■■□□□ 1.61
RGMA-208ENST00000556658 PXDNLA1KZ92 1463 aa25.13■■□□□ 1.61
RGMA-208ENST00000556658 PI4KAP2A4QPH2 592 aa25.13■■□□□ 1.61
RGMA-208ENST00000556658 PI4KAP1Q8N8J0 262 aa25.13■■□□□ 1.61
RGMA-208ENST00000556658 KSR2Q6VAB6 950 aa25.13■■□□□ 1.61
RGMA-208ENST00000556658 AIMP1Q12904 312 aaKnown RBP25.12■■□□□ 1.61
RGMA-208ENST00000556658 DNAJC10Q8IXB1 793 aa25.12■■□□□ 1.61
RGMA-208ENST00000556658 DNAAF4Q8WXU2 420 aa25.12■■□□□ 1.61
RGMA-208ENST00000556658 N4BP2Q86UW6 1770 aaPredicted RBP25.11■■□□□ 1.61
RGMA-208ENST00000556658 COPS6Q7L5N1 327 aa25.11■■□□□ 1.61
RGMA-208ENST00000556658 PCDHB15Q9Y5E8 787 aa25.11■■□□□ 1.61
RGMA-208ENST00000556658 A1BGP04217 495 aa25.1■■□□□ 1.61
RGMA-208ENST00000556658 FAM182BQ5T319 152 aa25.1■■□□□ 1.61
RGMA-208ENST00000556658 XAGE3Q8WTP9 111 aa25.1■■□□□ 1.61
RGMA-208ENST00000556658 PIP4K2AP48426 406 aaPredicted RBP25.09■■□□□ 1.61
RGMA-208ENST00000556658 CENPQQ7L2Z9 268 aaPredicted RBP25.09■■□□□ 1.61
RGMA-208ENST00000556658 ADCY9O60503 1353 aa25.09■■□□□ 1.61
RGMA-208ENST00000556658 NHSQ6T4R5 1651 aa25.09■■□□□ 1.61
RGMA-208ENST00000556658 NBPF26B4DH59 902 aa25.09■■□□□ 1.61
RGMA-208ENST00000556658 NBPF14Q5TI25 921 aa25.09■■□□□ 1.61
RGMA-208ENST00000556658 NBPF10Q6P3W6 841 aaKnown RBP25.09■■□□□ 1.61
RGMA-208ENST00000556658 LRP10Q7Z4F1 713 aa25.09■■□□□ 1.61
RGMA-208ENST00000556658 NBPF15Q8N660 670 aa25.09■■□□□ 1.61
RGMA-208ENST00000556658 MAP3K2Q9Y2U5 619 aa25.09■■□□□ 1.61
RGMA-208ENST00000556658 PALLDQ8WX93 1383 aa25.08■■□□□ 1.61
RGMA-208ENST00000556658 KRT27Q7Z3Y8 459 aa25.08■■□□□ 1.61
RGMA-208ENST00000556658 RIC3Q7Z5B4 369 aa25.08■■□□□ 1.61
RGMA-208ENST00000556658 SLC4A9Q96Q91 983 aa25.08■■□□□ 1.61
RGMA-208ENST00000556658 SRCIN1Q9C0H9 1055 aa25.08■■□□□ 1.61
RGMA-208ENST00000556658 RWDD1Q9H446 243 aaPredicted RBP25.08■■□□□ 1.61
RGMA-208ENST00000556658 BRWD3Q6RI45 1802 aa25.07■■□□□ 1.6
RGMA-208ENST00000556658 LOC102724428A0A0B4J2F2 783 aa25.07■■□□□ 1.6
RGMA-208ENST00000556658 SIK1P57059 783 aa25.07■■□□□ 1.6
RGMA-208ENST00000556658 SBF2Q86WG5 1849 aa25.07■■□□□ 1.6
RGMA-208ENST00000556658 ATP6V1AP38606 617 aa25.06■■□□□ 1.6
RGMA-208ENST00000556658 ANKRD13DQ6ZTN6 518 aa25.06■■□□□ 1.6
RGMA-208ENST00000556658 CYP19A1P11511 503 aaPredicted RBP25.06■■□□□ 1.6
RGMA-208ENST00000556658 RXRBP28702 533 aa25.06■■□□□ 1.6
RGMA-208ENST00000556658 TJP1Q07157 1748 aa25.05■■□□□ 1.6
RGMA-208ENST00000556658 ATP10DQ9P241 1426 aa25.05■■□□□ 1.6
RGMA-208ENST00000556658 KDM2BQ8NHM5 1336 aa25.05■■□□□ 1.6
RGMA-208ENST00000556658 BTAF1O14981 1849 aa25.05■■□□□ 1.6
RGMA-208ENST00000556658 BEND3Q5T5X7 828 aa25.04■■□□□ 1.6
RGMA-208ENST00000556658 FAM196AQ6ZSG2 479 aa25.04■■□□□ 1.6
RGMA-208ENST00000556658 GNAI3P08754 354 aa25.04■■□□□ 1.6
RGMA-208ENST00000556658 MEIS3Q99687 375 aa25.04■■□□□ 1.6
RGMA-208ENST00000556658 IGHDP01880 384 aa25.03■■□□□ 1.6
RGMA-208ENST00000556658 NEXNQ0ZGT2 675 aa25.03■■□□□ 1.6
RGMA-208ENST00000556658 PLBD2Q8NHP8 589 aa25.02■■□□□ 1.6
RGMA-208ENST00000556658 ALDH1L1O75891 902 aa25.02■■□□□ 1.6
RGMA-208ENST00000556658 HDAC1Q13547 482 aaPredicted RBP25.02■■□□□ 1.6
RGMA-208ENST00000556658 C1orf115Q9H7X2 142 aa25.02■■□□□ 1.6
RGMA-208ENST00000556658 CICQ96RK0 1608 aaPredicted RBP25.01■■□□□ 1.59
RGMA-208ENST00000556658 ZNF831Q5JPB2 1677 aa25.01■■□□□ 1.59
RGMA-208ENST00000556658 LINS1Q8NG48 757 aa25.01■■□□□ 1.59
RGMA-208ENST00000556658 PTF1AQ7RTS3 328 aa25■■□□□ 1.59
RGMA-208ENST00000556658 METTL22Q9BUU2 404 aaPredicted RBP25■■□□□ 1.59
RGMA-208ENST00000556658 BCL11BQ9C0K0 894 aaPredicted RBP25■■□□□ 1.59
RGMA-208ENST00000556658 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
RGMA-208ENST00000556658 GNAI2P04899 355 aa24.99■■□□□ 1.59
RGMA-208ENST00000556658 USP44Q9H0E7 712 aa24.99■■□□□ 1.59
RGMA-208ENST00000556658 ZNF330Q9Y3S2 320 aaPredicted RBP24.99■■□□□ 1.59
RGMA-208ENST00000556658 ARFGEF2Q9Y6D5 1785 aa24.98■■□□□ 1.59
RGMA-208ENST00000556658 TTLL7Q6ZT98 887 aa24.98■■□□□ 1.59
RGMA-208ENST00000556658 RPAP2Q8IXW5 612 aaPredicted RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms