RNA–Protein interactions for RNA: ENST00000556609.5

EFCAB11-211, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3 BASIC

Gene EFCAB11, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-211ENST00000556609 USPL1Q5W0Q7 1092 aa23.65■■□□□ 1.38
EFCAB11-211ENST00000556609 ZBTB1Q9Y2K1 713 aa23.65■■□□□ 1.38
EFCAB11-211ENST00000556609 C10orf71Q711Q0 1435 aa23.65■■□□□ 1.38
EFCAB11-211ENST00000556609 NPM2Q86SE8 214 aaKnown RBP23.64■■□□□ 1.37
EFCAB11-211ENST00000556609 COL15A1P39059 1388 aa23.64■■□□□ 1.37
EFCAB11-211ENST00000556609 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
EFCAB11-211ENST00000556609 A0A0G2JLW4 131 aa23.62■■□□□ 1.37
EFCAB11-211ENST00000556609 EIF5P55010 431 aaKnown RBP23.62■■□□□ 1.37
EFCAB11-211ENST00000556609 PXDNLA1KZ92 1463 aa23.61■■□□□ 1.37
EFCAB11-211ENST00000556609 C4AP0C0L4 1744 aa23.6■■□□□ 1.37
EFCAB11-211ENST00000556609 POLRMTO00411 1230 aaKnown RBP23.6■■□□□ 1.37
EFCAB11-211ENST00000556609 DPEP1P16444 411 aa23.6■■□□□ 1.37
EFCAB11-211ENST00000556609 IL6STP40189 918 aaPredicted RBP23.6■■□□□ 1.37
EFCAB11-211ENST00000556609 DDR1Q08345 913 aa23.6■■□□□ 1.37
EFCAB11-211ENST00000556609 MCM10Q7L590 875 aa23.6■■□□□ 1.37
EFCAB11-211ENST00000556609 TAF7Q15545 349 aaPredicted RBP23.59■■□□□ 1.37
EFCAB11-211ENST00000556609 PIM2Q9P1W9 311 aa23.59■■□□□ 1.37
EFCAB11-211ENST00000556609 SNRPA1P09661 255 aaKnown RBP23.58■■□□□ 1.37
EFCAB11-211ENST00000556609 PNISRQ8TF01 805 aaKnown RBP23.58■■□□□ 1.37
EFCAB11-211ENST00000556609 BCS1LQ9Y276 419 aa23.58■■□□□ 1.37
EFCAB11-211ENST00000556609 NFIXQ14938 502 aa23.57■■□□□ 1.36
EFCAB11-211ENST00000556609 WWC3Q9ULE0 1092 aa23.57■■□□□ 1.36
EFCAB11-211ENST00000556609 UBR2Q8IWV8 1755 aa23.56■■□□□ 1.36
EFCAB11-211ENST00000556609 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
EFCAB11-211ENST00000556609 MAPK8IP3Q9UPT6 1336 aa23.56■■□□□ 1.36
EFCAB11-211ENST00000556609 GIGYF1O75420 1035 aaPredicted RBP23.55■■□□□ 1.36
EFCAB11-211ENST00000556609 PLEKHF1Q96S99 279 aa23.55■■□□□ 1.36
EFCAB11-211ENST00000556609 BCL2L12Q9HB09 334 aa23.55■■□□□ 1.36
EFCAB11-211ENST00000556609 KIF13BQ9NQT8 1826 aa23.54■■□□□ 1.36
EFCAB11-211ENST00000556609 KCNQ3O43525 872 aa23.54■■□□□ 1.36
EFCAB11-211ENST00000556609 NFE2L2Q16236 605 aa23.54■■□□□ 1.36
EFCAB11-211ENST00000556609 DALRD3Q5D0E6 543 aaKnown RBP23.54■■□□□ 1.36
EFCAB11-211ENST00000556609 A1BGP04217 495 aa23.53■■□□□ 1.36
EFCAB11-211ENST00000556609 SERPINB2P05120 415 aa23.53■■□□□ 1.36
EFCAB11-211ENST00000556609 KCNA3P22001 575 aa23.53■■□□□ 1.36
EFCAB11-211ENST00000556609 DCTN1Q14203 1278 aa23.53■■□□□ 1.36
EFCAB11-211ENST00000556609 ZNF330Q9Y3S2 320 aaPredicted RBP23.53■■□□□ 1.36
EFCAB11-211ENST00000556609 VIRMAQ69YN4 1812 aaKnown RBP23.52■■□□□ 1.36
EFCAB11-211ENST00000556609 ARHGAP27Q6ZUM4 889 aa23.52■■□□□ 1.36
EFCAB11-211ENST00000556609 PDZRN3Q9UPQ7 1066 aa23.52■■□□□ 1.36
EFCAB11-211ENST00000556609 C1QTNF8P60827 252 aa23.51■■□□□ 1.35
EFCAB11-211ENST00000556609 USP16Q9Y5T5 823 aa23.51■■□□□ 1.35
EFCAB11-211ENST00000556609 ATP10DQ9P241 1426 aa23.5■■□□□ 1.35
EFCAB11-211ENST00000556609 SIPA1L3O60292 1781 aaPredicted RBP23.5■■□□□ 1.35
EFCAB11-211ENST00000556609 GPBP1L1Q9HC44 474 aaPredicted RBP23.5■■□□□ 1.35
EFCAB11-211ENST00000556609 TBC1D2BQ9UPU7 963 aa23.5■■□□□ 1.35
EFCAB11-211ENST00000556609 MYBBP1AQ9BQG0 1328 aaKnown RBP23.5■■□□□ 1.35
EFCAB11-211ENST00000556609 RGL2O15211 777 aa23.49■■□□□ 1.35
EFCAB11-211ENST00000556609 ADCY9O60503 1353 aa23.49■■□□□ 1.35
EFCAB11-211ENST00000556609 CLEC4GQ6UXB4 293 aa23.48■■□□□ 1.35
EFCAB11-211ENST00000556609 SETDB2Q96T68 719 aa23.48■■□□□ 1.35
EFCAB11-211ENST00000556609 BICDL1Q6ZP65 573 aa23.47■■□□□ 1.35
EFCAB11-211ENST00000556609 DZIP3Q86Y13 1208 aaKnown RBP23.47■■□□□ 1.35
EFCAB11-211ENST00000556609 ZNF652Q9Y2D9 606 aa23.47■■□□□ 1.35
EFCAB11-211ENST00000556609 H0YIN7 160 aa23.46■■□□□ 1.35
EFCAB11-211ENST00000556609 CAMTA2O94983 1202 aa23.46■■□□□ 1.35
EFCAB11-211ENST00000556609 CHRNA5P30532 468 aa23.46■■□□□ 1.35
EFCAB11-211ENST00000556609 LMOD3Q0VAK6 560 aa23.46■■□□□ 1.35
EFCAB11-211ENST00000556609 TBC1D9BQ66K14 1250 aa23.46■■□□□ 1.35
EFCAB11-211ENST00000556609 CARMIL3Q8ND23 1372 aa23.46■■□□□ 1.35
EFCAB11-211ENST00000556609 PDE6BP35913 854 aa23.45■■□□□ 1.34
EFCAB11-211ENST00000556609 BRIP1Q9BX63 1249 aa23.45■■□□□ 1.34
EFCAB11-211ENST00000556609 MIS18AQ9NYP9 233 aa23.44■■□□□ 1.34
EFCAB11-211ENST00000556609 KIAA1551Q9HCM1 1747 aa23.44■■□□□ 1.34
EFCAB11-211ENST00000556609 C2CD5Q86YS7 1000 aa23.43■■□□□ 1.34
EFCAB11-211ENST00000556609 TTLL6Q8N841 843 aa23.43■■□□□ 1.34
EFCAB11-211ENST00000556609 BABAM1Q9NWV8 329 aa23.43■■□□□ 1.34
EFCAB11-211ENST00000556609 N4BP2Q86UW6 1770 aaPredicted RBP23.42■■□□□ 1.34
EFCAB11-211ENST00000556609 PRAMEF22A3QJZ6 481 aa23.42■■□□□ 1.34
EFCAB11-211ENST00000556609 NPHP1O15259 732 aa23.42■■□□□ 1.34
EFCAB11-211ENST00000556609 ZEB1P37275 1124 aaPredicted RBP23.42■■□□□ 1.34
EFCAB11-211ENST00000556609 RIPK4P57078 832 aa23.42■■□□□ 1.34
EFCAB11-211ENST00000556609 EIF4A1P60842 406 aaKnown RBP23.41■■□□□ 1.34
EFCAB11-211ENST00000556609 ST5P78524 1137 aa23.41■■□□□ 1.34
EFCAB11-211ENST00000556609 WDR43Q15061 677 aaKnown RBP eCLIP23.41■■□□□ 1.34
EFCAB11-211ENST00000556609 PRR5LQ6MZQ0 368 aa23.4■■□□□ 1.34
EFCAB11-211ENST00000556609 CNBD1Q8NA66 436 aa23.4■■□□□ 1.34
EFCAB11-211ENST00000556609 NBPF26B4DH59 902 aa23.39■■□□□ 1.33
EFCAB11-211ENST00000556609 TMPOP42166 694 aaKnown RBP23.39■■□□□ 1.33
EFCAB11-211ENST00000556609 NBPF10Q6P3W6 841 aaKnown RBP23.39■■□□□ 1.33
EFCAB11-211ENST00000556609 NBPF15Q8N660 670 aa23.39■■□□□ 1.33
EFCAB11-211ENST00000556609 ZNF526Q8TF50 670 aaPredicted RBP23.39■■□□□ 1.33
EFCAB11-211ENST00000556609 C9orf131Q5VYM1 1079 aa23.38■■□□□ 1.33
EFCAB11-211ENST00000556609 THUMPD2Q9BTF0 503 aaKnown RBP23.38■■□□□ 1.33
EFCAB11-211ENST00000556609 NRXN2Q9P2S2 1712 aa23.38■■□□□ 1.33
EFCAB11-211ENST00000556609 PIP4K2AP48426 406 aaPredicted RBP23.37■■□□□ 1.33
EFCAB11-211ENST00000556609 TSPYL4Q9UJ04 414 aa23.37■■□□□ 1.33
EFCAB11-211ENST00000556609 TPTE2Q6XPS3 522 aa23.36■■□□□ 1.33
EFCAB11-211ENST00000556609 NBPF5PQ86XG9 351 aaPredicted RBP23.36■■□□□ 1.33
EFCAB11-211ENST00000556609 RUNDC1Q96C34 613 aa23.36■■□□□ 1.33
EFCAB11-211ENST00000556609 PRKRIP1Q9H875 184 aaPredicted RBP23.36■■□□□ 1.33
EFCAB11-211ENST00000556609 ERBB4Q15303 1308 aa23.35■■□□□ 1.33
EFCAB11-211ENST00000556609 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
EFCAB11-211ENST00000556609 ERVV-1B6SEH8 477 aa23.35■■□□□ 1.33
EFCAB11-211ENST00000556609 ZNF622Q969S3 477 aaKnown RBP eCLIP23.35■■□□□ 1.33
EFCAB11-211ENST00000556609 CNKSR1Q969H4 720 aa23.34■■□□□ 1.33
EFCAB11-211ENST00000556609 NIP7Q9Y221 180 aaKnown RBP eCLIP23.34■■□□□ 1.33
EFCAB11-211ENST00000556609 SCN7AQ01118 1682 aa23.34■■□□□ 1.33
EFCAB11-211ENST00000556609 BRCA1P38398 1863 aaKnown RBP23.33■■□□□ 1.33
EFCAB11-211ENST00000556609 STYK1Q6J9G0 422 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms