RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 VSIG10Q8N0Z9 540 aa14.11□□□□□ -0.15
SPTLC2-205ENST00000556607 RSPH6AQ9H0K4 717 aa14.11□□□□□ -0.15
SPTLC2-205ENST00000556607 SIPA1L3O60292 1781 aaPredicted RBP14.11□□□□□ -0.15
SPTLC2-205ENST00000556607 SOS1Q07889 1333 aaPredicted RBP14.11□□□□□ -0.15
SPTLC2-205ENST00000556607 GOLGB1Q14789 3259 aaKnown RBP14.1□□□□□ -0.15
SPTLC2-205ENST00000556607 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
SPTLC2-205ENST00000556607 C10orf71Q711Q0 1435 aa14.1□□□□□ -0.15
SPTLC2-205ENST00000556607 BTBD11A6QL63 1104 aa14.1□□□□□ -0.15
SPTLC2-205ENST00000556607 FCHSD2O94868 740 aa14.1□□□□□ -0.15
SPTLC2-205ENST00000556607 C1QTNF8P60827 252 aa14.1□□□□□ -0.15
SPTLC2-205ENST00000556607 ZNF790Q6PG37 636 aa14.1□□□□□ -0.15
SPTLC2-205ENST00000556607 ATP10DQ9P241 1426 aa14.09□□□□□ -0.15
SPTLC2-205ENST00000556607 ARHGAP27Q6ZUM4 889 aa14.09□□□□□ -0.15
SPTLC2-205ENST00000556607 ZNF496Q96IT1 587 aaPredicted RBP14.09□□□□□ -0.15
SPTLC2-205ENST00000556607 GPBP1L1Q9HC44 474 aaPredicted RBP14.09□□□□□ -0.15
SPTLC2-205ENST00000556607 NARFQ9UHQ1 456 aa14.09□□□□□ -0.15
SPTLC2-205ENST00000556607 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
SPTLC2-205ENST00000556607 SENP3-EIF4A1A0A087X0R7 540 aa14.08□□□□□ -0.16
SPTLC2-205ENST00000556607 DDR1Q08345 913 aa14.08□□□□□ -0.16
SPTLC2-205ENST00000556607 BICDL1Q6ZP65 573 aa14.08□□□□□ -0.16
SPTLC2-205ENST00000556607 MCM10Q7L590 875 aa14.08□□□□□ -0.16
SPTLC2-205ENST00000556607 FMNL2Q96PY5 1086 aa14.08□□□□□ -0.16
SPTLC2-205ENST00000556607 TEX13AQ9BXU3 409 aaPredicted RBP14.08□□□□□ -0.16
SPTLC2-205ENST00000556607 AFDNP55196 1824 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-205ENST00000556607 POLRMTO00411 1230 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-205ENST00000556607 TM4SF1P30408 202 aa14.07□□□□□ -0.16
SPTLC2-205ENST00000556607 PIM2Q9P1W9 311 aa14.07□□□□□ -0.16
SPTLC2-205ENST00000556607 BRCA1P38398 1863 aaKnown RBP14.07□□□□□ -0.16
SPTLC2-205ENST00000556607 A0A087WZG4 1122 aa14.06□□□□□ -0.16
SPTLC2-205ENST00000556607 KCNQ3O43525 872 aa14.06□□□□□ -0.16
SPTLC2-205ENST00000556607 DCTN1Q14203 1278 aa14.06□□□□□ -0.16
SPTLC2-205ENST00000556607 SERPINB2P05120 415 aa14.05□□□□□ -0.16
SPTLC2-205ENST00000556607 CHRNA5P30532 468 aa14.05□□□□□ -0.16
SPTLC2-205ENST00000556607 NFIXQ14938 502 aa14.05□□□□□ -0.16
SPTLC2-205ENST00000556607 TBC1D2BQ9UPU7 963 aa14.05□□□□□ -0.16
SPTLC2-205ENST00000556607 ARFGEF1Q9Y6D6 1849 aa14.05□□□□□ -0.16
SPTLC2-205ENST00000556607 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
SPTLC2-205ENST00000556607 CEMIPQ8WUJ3 1361 aa14.05□□□□□ -0.16
SPTLC2-205ENST00000556607 NPHP1O15259 732 aa14.04□□□□□ -0.16
SPTLC2-205ENST00000556607 A1BGP04217 495 aa14.04□□□□□ -0.16
SPTLC2-205ENST00000556607 KCNA3P22001 575 aa14.04□□□□□ -0.16
SPTLC2-205ENST00000556607 EIF5P55010 431 aaKnown RBP14.04□□□□□ -0.16
SPTLC2-205ENST00000556607 DALRD3Q5D0E6 543 aaKnown RBP14.04□□□□□ -0.16
SPTLC2-205ENST00000556607 MAPK8IP3Q9UPT6 1336 aa14.02□□□□□ -0.17
SPTLC2-205ENST00000556607 IL6STP40189 918 aaPredicted RBP14.02□□□□□ -0.17
SPTLC2-205ENST00000556607 PIP4K2AP48426 406 aaPredicted RBP14.02□□□□□ -0.17
SPTLC2-205ENST00000556607 PNNQ9H307 717 aaKnown RBP14.02□□□□□ -0.17
SPTLC2-205ENST00000556607 BCL2L12Q9HB09 334 aa14.02□□□□□ -0.17
SPTLC2-205ENST00000556607 USP16Q9Y5T5 823 aa14.02□□□□□ -0.17
SPTLC2-205ENST00000556607 ADCY9O60503 1353 aa14.01□□□□□ -0.17
SPTLC2-205ENST00000556607 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
SPTLC2-205ENST00000556607 HTATSF1O43719 755 aaKnown RBP14.01□□□□□ -0.17
SPTLC2-205ENST00000556607 TBC1D9BQ66K14 1250 aa14.01□□□□□ -0.17
SPTLC2-205ENST00000556607 NRXN2Q9P2S2 1712 aa14.01□□□□□ -0.17
SPTLC2-205ENST00000556607 SCN7AQ01118 1682 aa14.01□□□□□ -0.17
SPTLC2-205ENST00000556607 SNRPA1P09661 255 aaKnown RBP14□□□□□ -0.17
SPTLC2-205ENST00000556607 DDX10Q13206 875 aaKnown RBP14□□□□□ -0.17
SPTLC2-205ENST00000556607 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
SPTLC2-205ENST00000556607 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
SPTLC2-205ENST00000556607 MIS18AQ9NYP9 233 aa14□□□□□ -0.17
SPTLC2-205ENST00000556607 H0YIN7 160 aa13.99□□□□□ -0.17
SPTLC2-205ENST00000556607 C9orf131Q5VYM1 1079 aa13.99□□□□□ -0.17
SPTLC2-205ENST00000556607 C2CD5Q86YS7 1000 aa13.99□□□□□ -0.17
SPTLC2-205ENST00000556607 CCDC24Q8N4L8 307 aa13.99□□□□□ -0.17
SPTLC2-205ENST00000556607 SETDB2Q96T68 719 aa13.99□□□□□ -0.17
SPTLC2-205ENST00000556607 ZNF622Q969S3 477 aaKnown RBP eCLIP13.98□□□□□ -0.17
SPTLC2-205ENST00000556607 RNF181Q9P0P0 153 aa13.98□□□□□ -0.17
SPTLC2-205ENST00000556607 BCORQ6W2J9 1755 aa13.98□□□□□ -0.17
SPTLC2-205ENST00000556607 DLEC1Q9Y238 1755 aa13.98□□□□□ -0.17
SPTLC2-205ENST00000556607 CACNA1SQ13698 1873 aa13.97□□□□□ -0.17
SPTLC2-205ENST00000556607 CARMIL3Q8ND23 1372 aa13.97□□□□□ -0.17
SPTLC2-205ENST00000556607 RALBP1Q15311 655 aa13.97□□□□□ -0.17
SPTLC2-205ENST00000556607 NFE2L2Q16236 605 aa13.97□□□□□ -0.17
SPTLC2-205ENST00000556607 TTLL6Q8N841 843 aa13.97□□□□□ -0.17
SPTLC2-205ENST00000556607 PNISRQ8TF01 805 aaKnown RBP13.97□□□□□ -0.17
SPTLC2-205ENST00000556607 SBF1O95248 1867 aa13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 CCDC88AQ3V6T2 1871 aa13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 CAMTA2O94983 1202 aa13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 PDE6BP35913 854 aa13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 ST5P78524 1137 aa13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 NGEFQ8N5V2 710 aa13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 PLEKHF1Q96S99 279 aa13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 THUMPD2Q9BTF0 503 aaKnown RBP13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.17
SPTLC2-205ENST00000556607 LAMB4A4D0S4 1761 aa13.96□□□□□ -0.18
SPTLC2-205ENST00000556607 ANKRD31Q8N7Z5 1873 aa13.95□□□□□ -0.18
SPTLC2-205ENST00000556607 RASSF7Q02833 373 aa13.95□□□□□ -0.18
SPTLC2-205ENST00000556607 PRR5LQ6MZQ0 368 aa13.95□□□□□ -0.18
SPTLC2-205ENST00000556607 CNBD1Q8NA66 436 aa13.95□□□□□ -0.18
SPTLC2-205ENST00000556607 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
SPTLC2-205ENST00000556607 FAM177BA6PVY3 158 aa13.94□□□□□ -0.18
SPTLC2-205ENST00000556607 KIF3CO14782 793 aa13.94□□□□□ -0.18
SPTLC2-205ENST00000556607 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
SPTLC2-205ENST00000556607 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
SPTLC2-205ENST00000556607 RIPK4P57078 832 aa13.93□□□□□ -0.18
SPTLC2-205ENST00000556607 NBPF5PQ86XG9 351 aaPredicted RBP13.93□□□□□ -0.18
SPTLC2-205ENST00000556607 NMRK2Q9NPI5 230 aa13.93□□□□□ -0.18
SPTLC2-205ENST00000556607 PDZRN3Q9UPQ7 1066 aa13.93□□□□□ -0.18
SPTLC2-205ENST00000556607 RRP7AQ9Y3A4 280 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms