RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 LGR6Q9HBX8 967 aa16.19■□□□□ 0.18
ACTN1-221ENST00000556571 RNMTO43148 476 aaKnown RBP16.18■□□□□ 0.18
ACTN1-221ENST00000556571 LMNB1P20700 586 aa16.18■□□□□ 0.18
ACTN1-221ENST00000556571 WDR90Q96KV7 1748 aa16.18■□□□□ 0.18
ACTN1-221ENST00000556571 TJP1Q07157 1748 aa16.17■□□□□ 0.18
ACTN1-221ENST00000556571 SERPINB2P05120 415 aa16.17■□□□□ 0.18
ACTN1-221ENST00000556571 VEGFAP15692 232 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-221ENST00000556571 RASSF7Q02833 373 aa16.17■□□□□ 0.18
ACTN1-221ENST00000556571 SLC39A6Q13433 755 aa16.17■□□□□ 0.18
ACTN1-221ENST00000556571 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
ACTN1-221ENST00000556571 TTLL6Q8N841 843 aa16.17■□□□□ 0.18
ACTN1-221ENST00000556571 COL15A1P39059 1388 aa16.16■□□□□ 0.18
ACTN1-221ENST00000556571 GLTPD2A6NH11 291 aa16.16■□□□□ 0.18
ACTN1-221ENST00000556571 COL13A1Q5TAT6 717 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-221ENST00000556571 ZBTB1Q9Y2K1 713 aa16.16■□□□□ 0.18
ACTN1-221ENST00000556571 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
ACTN1-221ENST00000556571 ADAMTS7Q9UKP4 1686 aa16.14■□□□□ 0.18
ACTN1-221ENST00000556571 H0YIN7 160 aa16.14■□□□□ 0.17
ACTN1-221ENST00000556571 C2CD5Q86YS7 1000 aa16.14■□□□□ 0.17
ACTN1-221ENST00000556571 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
ACTN1-221ENST00000556571 HMOX1P09601 288 aa16.13■□□□□ 0.17
ACTN1-221ENST00000556571 CANXP27824 592 aaKnown RBP16.13■□□□□ 0.17
ACTN1-221ENST00000556571 PRELPP51888 382 aa16.13■□□□□ 0.17
ACTN1-221ENST00000556571 MTHFSDQ2M296 383 aaKnown RBP16.13■□□□□ 0.17
ACTN1-221ENST00000556571 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-221ENST00000556571 PCGF6Q9BYE7 350 aa16.13■□□□□ 0.17
ACTN1-221ENST00000556571 SBF1O95248 1867 aa16.13■□□□□ 0.17
ACTN1-221ENST00000556571 TNRC6CQ9HCJ0 1690 aaKnown RBP16.12■□□□□ 0.17
ACTN1-221ENST00000556571 MRC1P22897 1456 aa16.12■□□□□ 0.17
ACTN1-221ENST00000556571 A0A087WZG4 1122 aa16.12■□□□□ 0.17
ACTN1-221ENST00000556571 STARD3NLO95772 234 aa16.12■□□□□ 0.17
ACTN1-221ENST00000556571 DPY19L2Q6NUT2 758 aa16.12■□□□□ 0.17
ACTN1-221ENST00000556571 PDZRN3Q9UPQ7 1066 aa16.12■□□□□ 0.17
ACTN1-221ENST00000556571 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
ACTN1-221ENST00000556571 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
ACTN1-221ENST00000556571 PCNTO95613 3336 aa16.11■□□□□ 0.17
ACTN1-221ENST00000556571 NFKBIEO00221 500 aa16.1■□□□□ 0.17
ACTN1-221ENST00000556571 BICDL1Q6ZP65 573 aa16.1■□□□□ 0.17
ACTN1-221ENST00000556571 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
ACTN1-221ENST00000556571 DIAPH1O60610 1272 aaKnown RBP16.09■□□□□ 0.17
ACTN1-221ENST00000556571 PDE6BP35913 854 aa16.09■□□□□ 0.17
ACTN1-221ENST00000556571 BRIP1Q9BX63 1249 aa16.09■□□□□ 0.17
ACTN1-221ENST00000556571 TEX13AQ9BXU3 409 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-221ENST00000556571 NRXN2Q9P2S2 1712 aa16.08■□□□□ 0.17
ACTN1-221ENST00000556571 AFDNP55196 1824 aaKnown RBP16.08■□□□□ 0.17
ACTN1-221ENST00000556571 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.16
ACTN1-221ENST00000556571 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
ACTN1-221ENST00000556571 POTECB2RU33 542 aa16.07■□□□□ 0.16
ACTN1-221ENST00000556571 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
ACTN1-221ENST00000556571 C21orf2O43822 256 aa16.06■□□□□ 0.16
ACTN1-221ENST00000556571 CAPN15O75808 1086 aa16.06■□□□□ 0.16
ACTN1-221ENST00000556571 HSPA1AP0DMV8 641 aaKnown RBP16.06■□□□□ 0.16
ACTN1-221ENST00000556571 HSPA1BP0DMV9 641 aaKnown RBP16.06■□□□□ 0.16
ACTN1-221ENST00000556571 TEFQ10587 303 aa16.06■□□□□ 0.16
ACTN1-221ENST00000556571 ERFEQ4G0M1 354 aa16.06■□□□□ 0.16
ACTN1-221ENST00000556571 ZNF790Q6PG37 636 aa16.06■□□□□ 0.16
ACTN1-221ENST00000556571 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
ACTN1-221ENST00000556571 IL6STP40189 918 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-221ENST00000556571 PRR5LQ6MZQ0 368 aa16.05■□□□□ 0.16
ACTN1-221ENST00000556571 NPM2Q86SE8 214 aaKnown RBP16.05■□□□□ 0.16
ACTN1-221ENST00000556571 TBC1D2BQ9UPU7 963 aa16.05■□□□□ 0.16
ACTN1-221ENST00000556571 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
ACTN1-221ENST00000556571 GNAT3A8MTJ3 354 aa16.04■□□□□ 0.16
ACTN1-221ENST00000556571 IL17REQ8NFR9 667 aa16.04■□□□□ 0.16
ACTN1-221ENST00000556571 GAS2L2Q8NHY3 880 aa16.04■□□□□ 0.16
ACTN1-221ENST00000556571 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-221ENST00000556571 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
ACTN1-221ENST00000556571 DLEC1Q9Y238 1755 aa16.04■□□□□ 0.16
ACTN1-221ENST00000556571 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
ACTN1-221ENST00000556571 PER1O15534 1290 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-221ENST00000556571 CNKSR1Q969H4 720 aa16.03■□□□□ 0.16
ACTN1-221ENST00000556571 SETDB2Q96T68 719 aa16.03■□□□□ 0.16
ACTN1-221ENST00000556571 TAOK3Q9H2K8 898 aa16.03■□□□□ 0.16
ACTN1-221ENST00000556571 KIF7Q2M1P5 1343 aa16.02■□□□□ 0.16
ACTN1-221ENST00000556571 NPHP1O15259 732 aa16.02■□□□□ 0.16
ACTN1-221ENST00000556571 CC2D1BQ5T0F9 858 aaKnown RBP16.02■□□□□ 0.16
ACTN1-221ENST00000556571 SOGA3Q5TF21 947 aa16.02■□□□□ 0.16
ACTN1-221ENST00000556571 STYK1Q6J9G0 422 aa16.02■□□□□ 0.16
ACTN1-221ENST00000556571 CHADLQ6NUI6 762 aa16.02■□□□□ 0.16
ACTN1-221ENST00000556571 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.16
ACTN1-221ENST00000556571 CNBD1Q8NA66 436 aa16.02■□□□□ 0.16
ACTN1-221ENST00000556571 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.16
ACTN1-221ENST00000556571 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
ACTN1-221ENST00000556571 ST5P78524 1137 aa16.01■□□□□ 0.15
ACTN1-221ENST00000556571 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
ACTN1-221ENST00000556571 CAMTA2O94983 1202 aa16■□□□□ 0.15
ACTN1-221ENST00000556571 A1BGP04217 495 aa16■□□□□ 0.15
ACTN1-221ENST00000556571 SRGNP10124 158 aa16■□□□□ 0.15
ACTN1-221ENST00000556571 MASTLQ96GX5 879 aa16■□□□□ 0.15
ACTN1-221ENST00000556571 UBR2Q8IWV8 1755 aa16■□□□□ 0.15
ACTN1-221ENST00000556571 DDNO94850 711 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-221ENST00000556571 PRPF40BQ6NWY9 871 aaKnown RBP15.99■□□□□ 0.15
ACTN1-221ENST00000556571 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
ACTN1-221ENST00000556571 CCDC88AQ3V6T2 1871 aa15.99■□□□□ 0.15
ACTN1-221ENST00000556571 IQCA1LA6NCM1 817 aa15.98■□□□□ 0.15
ACTN1-221ENST00000556571 DZIP3Q86Y13 1208 aaKnown RBP15.98■□□□□ 0.15
ACTN1-221ENST00000556571 BTBD11A6QL63 1104 aa15.97■□□□□ 0.15
ACTN1-221ENST00000556571 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
ACTN1-221ENST00000556571 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-221ENST00000556571 MKRN1Q9UHC7 482 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms