RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 A0A087WZG4 1122 aa16.76■□□□□ 0.27
SNX6-207ENST00000556303 TM4SF1P30408 202 aa16.76■□□□□ 0.27
SNX6-207ENST00000556303 FKBP8Q14318 412 aa16.76■□□□□ 0.27
SNX6-207ENST00000556303 ZBTB1Q9Y2K1 713 aa16.76■□□□□ 0.27
SNX6-207ENST00000556303 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
SNX6-207ENST00000556303 C4AP0C0L4 1744 aa16.76■□□□□ 0.27
SNX6-207ENST00000556303 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
SNX6-207ENST00000556303 EIF5P55010 431 aaKnown RBP16.75■□□□□ 0.27
SNX6-207ENST00000556303 SRP68Q9UHB9 627 aaKnown RBP16.75■□□□□ 0.27
SNX6-207ENST00000556303 COL15A1P39059 1388 aa16.75■□□□□ 0.27
SNX6-207ENST00000556303 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
SNX6-207ENST00000556303 IL6STP40189 918 aaPredicted RBP16.73■□□□□ 0.27
SNX6-207ENST00000556303 POLRMTO00411 1230 aaKnown RBP16.72■□□□□ 0.27
SNX6-207ENST00000556303 CANXP27824 592 aaKnown RBP16.72■□□□□ 0.27
SNX6-207ENST00000556303 TAF7Q15545 349 aaPredicted RBP16.72■□□□□ 0.27
SNX6-207ENST00000556303 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
SNX6-207ENST00000556303 PXDNLA1KZ92 1463 aa16.72■□□□□ 0.27
SNX6-207ENST00000556303 DDR1Q08345 913 aa16.71■□□□□ 0.27
SNX6-207ENST00000556303 MCM10Q7L590 875 aa16.71■□□□□ 0.27
SNX6-207ENST00000556303 NPM2Q86SE8 214 aaKnown RBP16.71■□□□□ 0.27
SNX6-207ENST00000556303 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
SNX6-207ENST00000556303 A0A0G2JLW4 131 aa16.7■□□□□ 0.26
SNX6-207ENST00000556303 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
SNX6-207ENST00000556303 DDX10Q13206 875 aaKnown RBP16.7■□□□□ 0.26
SNX6-207ENST00000556303 DPEP1P16444 411 aa16.69■□□□□ 0.26
SNX6-207ENST00000556303 NFIXQ14938 502 aa16.69■□□□□ 0.26
SNX6-207ENST00000556303 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
SNX6-207ENST00000556303 KCNQ3O43525 872 aa16.68■□□□□ 0.26
SNX6-207ENST00000556303 KCNA3P22001 575 aa16.68■□□□□ 0.26
SNX6-207ENST00000556303 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
SNX6-207ENST00000556303 PIM2Q9P1W9 311 aa16.68■□□□□ 0.26
SNX6-207ENST00000556303 MYBBP1AQ9BQG0 1328 aaKnown RBP16.68■□□□□ 0.26
SNX6-207ENST00000556303 MAPK8IP3Q9UPT6 1336 aa16.68■□□□□ 0.26
SNX6-207ENST00000556303 RGL2O15211 777 aa16.67■□□□□ 0.26
SNX6-207ENST00000556303 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
SNX6-207ENST00000556303 BCS1LQ9Y276 419 aa16.67■□□□□ 0.26
SNX6-207ENST00000556303 USP16Q9Y5T5 823 aa16.67■□□□□ 0.26
SNX6-207ENST00000556303 KIAA1551Q9HCM1 1747 aa16.67■□□□□ 0.26
SNX6-207ENST00000556303 A1BGP04217 495 aa16.66■□□□□ 0.26
SNX6-207ENST00000556303 SERPINB2P05120 415 aa16.66■□□□□ 0.26
SNX6-207ENST00000556303 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
SNX6-207ENST00000556303 DALRD3Q5D0E6 543 aaKnown RBP16.65■□□□□ 0.26
SNX6-207ENST00000556303 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
SNX6-207ENST00000556303 ADCY9O60503 1353 aa16.64■□□□□ 0.26
SNX6-207ENST00000556303 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
SNX6-207ENST00000556303 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
SNX6-207ENST00000556303 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
SNX6-207ENST00000556303 BRCA1P38398 1863 aaKnown RBP16.63■□□□□ 0.25
SNX6-207ENST00000556303 NRXN2Q9P2S2 1712 aa16.63■□□□□ 0.25
SNX6-207ENST00000556303 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
SNX6-207ENST00000556303 LMOD3Q0VAK6 560 aa16.63■□□□□ 0.25
SNX6-207ENST00000556303 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
SNX6-207ENST00000556303 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
SNX6-207ENST00000556303 CAMTA2O94983 1202 aa16.62■□□□□ 0.25
SNX6-207ENST00000556303 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
SNX6-207ENST00000556303 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
SNX6-207ENST00000556303 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
SNX6-207ENST00000556303 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
SNX6-207ENST00000556303 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
SNX6-207ENST00000556303 DLG5Q8TDM6 1919 aa16.61■□□□□ 0.25
SNX6-207ENST00000556303 C1QTNF8P60827 252 aa16.61■□□□□ 0.25
SNX6-207ENST00000556303 TBC1D9BQ66K14 1250 aa16.61■□□□□ 0.25
SNX6-207ENST00000556303 ARHGAP27Q6ZUM4 889 aa16.61■□□□□ 0.25
SNX6-207ENST00000556303 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
SNX6-207ENST00000556303 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
SNX6-207ENST00000556303 AFDNP55196 1824 aaKnown RBP16.61■□□□□ 0.25
SNX6-207ENST00000556303 ARFGEF1Q9Y6D6 1849 aa16.61■□□□□ 0.25
SNX6-207ENST00000556303 PRAMEF22A3QJZ6 481 aa16.6■□□□□ 0.25
SNX6-207ENST00000556303 RIPK4P57078 832 aa16.6■□□□□ 0.25
SNX6-207ENST00000556303 EIF4A1P60842 406 aaKnown RBP16.6■□□□□ 0.25
SNX6-207ENST00000556303 GPBP1L1Q9HC44 474 aaPredicted RBP16.6■□□□□ 0.25
SNX6-207ENST00000556303 H0YIN7 160 aa16.59■□□□□ 0.25
SNX6-207ENST00000556303 CHRNA5P30532 468 aa16.59■□□□□ 0.25
SNX6-207ENST00000556303 PDE6BP35913 854 aa16.59■□□□□ 0.25
SNX6-207ENST00000556303 TMPOP42166 694 aaKnown RBP16.59■□□□□ 0.25
SNX6-207ENST00000556303 BICDL1Q6ZP65 573 aa16.59■□□□□ 0.25
SNX6-207ENST00000556303 POTEDQ86YR6 584 aa16.59■□□□□ 0.25
SNX6-207ENST00000556303 PRKRIP1Q9H875 184 aaPredicted RBP16.59■□□□□ 0.25
SNX6-207ENST00000556303 MIS18AQ9NYP9 233 aa16.59■□□□□ 0.25
SNX6-207ENST00000556303 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
SNX6-207ENST00000556303 WDR43Q15061 677 aaKnown RBP eCLIP16.58■□□□□ 0.24
SNX6-207ENST00000556303 TTLL6Q8N841 843 aa16.58■□□□□ 0.24
SNX6-207ENST00000556303 ERBB4Q15303 1308 aa16.57■□□□□ 0.24
SNX6-207ENST00000556303 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
SNX6-207ENST00000556303 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
SNX6-207ENST00000556303 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
SNX6-207ENST00000556303 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
SNX6-207ENST00000556303 ST5P78524 1137 aa16.56■□□□□ 0.24
SNX6-207ENST00000556303 PRR5LQ6MZQ0 368 aa16.56■□□□□ 0.24
SNX6-207ENST00000556303 C2CD5Q86YS7 1000 aa16.56■□□□□ 0.24
SNX6-207ENST00000556303 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
SNX6-207ENST00000556303 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
SNX6-207ENST00000556303 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
SNX6-207ENST00000556303 CEP350Q5VT06 3117 aa16.56■□□□□ 0.24
SNX6-207ENST00000556303 ERVV-1B6SEH8 477 aa16.55■□□□□ 0.24
SNX6-207ENST00000556303 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
SNX6-207ENST00000556303 NPHP1O15259 732 aa16.54■□□□□ 0.24
SNX6-207ENST00000556303 TPTE2Q6XPS3 522 aa16.54■□□□□ 0.24
SNX6-207ENST00000556303 BCORQ6W2J9 1755 aa16.54■□□□□ 0.24
SNX6-207ENST00000556303 ZC3H4Q9UPT8 1303 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms