RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ZBTB1Q9Y2K1 713 aa25.34■■□□□ 1.65
CDKN3-209ENST00000556102 PIM2Q9P1W9 311 aa25.33■■□□□ 1.65
CDKN3-209ENST00000556102 NARFQ9UHQ1 456 aa25.33■■□□□ 1.65
CDKN3-209ENST00000556102 SIPA1L3O60292 1781 aaPredicted RBP25.33■■□□□ 1.65
CDKN3-209ENST00000556102 GNAT3A8MTJ3 354 aa25.32■■□□□ 1.64
CDKN3-209ENST00000556102 TTC5Q8N0Z6 440 aa25.32■■□□□ 1.64
CDKN3-209ENST00000556102 AFDNP55196 1824 aaKnown RBP25.32■■□□□ 1.64
CDKN3-209ENST00000556102 TEFQ10587 303 aa25.3■■□□□ 1.64
CDKN3-209ENST00000556102 DALRD3Q5D0E6 543 aaKnown RBP25.3■■□□□ 1.64
CDKN3-209ENST00000556102 IL17REQ8NFR9 667 aa25.3■■□□□ 1.64
CDKN3-209ENST00000556102 CEP350Q5VT06 3117 aa25.3■■□□□ 1.64
CDKN3-209ENST00000556102 NRXN2Q9P2S2 1712 aa25.29■■□□□ 1.64
CDKN3-209ENST00000556102 KIF3CO14782 793 aa25.29■■□□□ 1.64
CDKN3-209ENST00000556102 STARD3NLO95772 234 aa25.28■■□□□ 1.64
CDKN3-209ENST00000556102 NFIXQ14938 502 aa25.28■■□□□ 1.64
CDKN3-209ENST00000556102 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
CDKN3-209ENST00000556102 CHRNA5P30532 468 aa25.27■■□□□ 1.64
CDKN3-209ENST00000556102 BCL2L12Q9HB09 334 aa25.27■■□□□ 1.64
CDKN3-209ENST00000556102 CANXP27824 592 aaKnown RBP25.26■■□□□ 1.63
CDKN3-209ENST00000556102 ZNF790Q6PG37 636 aa25.26■■□□□ 1.63
CDKN3-209ENST00000556102 ZNF496Q96IT1 587 aaPredicted RBP25.26■■□□□ 1.63
CDKN3-209ENST00000556102 HEG1Q9ULI3 1381 aa25.26■■□□□ 1.63
CDKN3-209ENST00000556102 HSPA6P17066 643 aa25.25■■□□□ 1.63
CDKN3-209ENST00000556102 TEX13AQ9BXU3 409 aaPredicted RBP25.25■■□□□ 1.63
CDKN3-209ENST00000556102 RSPH6AQ9H0K4 717 aa25.25■■□□□ 1.63
CDKN3-209ENST00000556102 CEMIPQ8WUJ3 1361 aa25.25■■□□□ 1.63
CDKN3-209ENST00000556102 PRKAR2BP31323 418 aa25.24■■□□□ 1.63
CDKN3-209ENST00000556102 EIF5P55010 431 aaKnown RBP25.24■■□□□ 1.63
CDKN3-209ENST00000556102 DLEC1Q9Y238 1755 aa25.23■■□□□ 1.63
CDKN3-209ENST00000556102 A0A087WZG4 1122 aa25.23■■□□□ 1.63
CDKN3-209ENST00000556102 SERPINB2P05120 415 aa25.23■■□□□ 1.63
CDKN3-209ENST00000556102 C9orf131Q5VYM1 1079 aa25.23■■□□□ 1.63
CDKN3-209ENST00000556102 PHACTR3Q96KR7 559 aa25.23■■□□□ 1.63
CDKN3-209ENST00000556102 NUDCQ9Y266 331 aa25.23■■□□□ 1.63
CDKN3-209ENST00000556102 SBF1O95248 1867 aa25.21■■□□□ 1.63
CDKN3-209ENST00000556102 SCN7AQ01118 1682 aa25.21■■□□□ 1.63
CDKN3-209ENST00000556102 FMNL2Q96PY5 1086 aa25.21■■□□□ 1.63
CDKN3-209ENST00000556102 PPP2R1AP30153 589 aa25.2■■□□□ 1.62
CDKN3-209ENST00000556102 IL6STP40189 918 aaPredicted RBP25.18■■□□□ 1.62
CDKN3-209ENST00000556102 BTBD11A6QL63 1104 aa25.17■■□□□ 1.62
CDKN3-209ENST00000556102 TOMM70O94826 608 aa25.17■■□□□ 1.62
CDKN3-209ENST00000556102 U2AF1L5P0DN76 240 aaPredicted RBP25.17■■□□□ 1.62
CDKN3-209ENST00000556102 U2AF1Q01081 240 aaKnown RBP eCLIP25.17■■□□□ 1.62
CDKN3-209ENST00000556102 NMRK2Q9NPI5 230 aa25.17■■□□□ 1.62
CDKN3-209ENST00000556102 RNF181Q9P0P0 153 aa25.17■■□□□ 1.62
CDKN3-209ENST00000556102 BICDL1Q6ZP65 573 aa25.16■■□□□ 1.62
CDKN3-209ENST00000556102 ZNF330Q9Y3S2 320 aaPredicted RBP25.16■■□□□ 1.62
CDKN3-209ENST00000556102 CARMIL3Q8ND23 1372 aa25.16■■□□□ 1.62
CDKN3-209ENST00000556102 KCNQ3O43525 872 aa25.15■■□□□ 1.62
CDKN3-209ENST00000556102 A1BGP04217 495 aa25.14■■□□□ 1.62
CDKN3-209ENST00000556102 TBC1D9BQ66K14 1250 aa25.14■■□□□ 1.62
CDKN3-209ENST00000556102 C2CD5Q86YS7 1000 aa25.14■■□□□ 1.62
CDKN3-209ENST00000556102 TBC1D2BQ9UPU7 963 aa25.14■■□□□ 1.62
CDKN3-209ENST00000556102 ANKRD31Q8N7Z5 1873 aa25.14■■□□□ 1.61
CDKN3-209ENST00000556102 NPM2Q86SE8 214 aaKnown RBP25.13■■□□□ 1.61
CDKN3-209ENST00000556102 TTLL6Q8N841 843 aa25.13■■□□□ 1.61
CDKN3-209ENST00000556102 RTF1Q92541 710 aaKnown RBP25.13■■□□□ 1.61
CDKN3-209ENST00000556102 H0YIN7 160 aa25.12■■□□□ 1.61
CDKN3-209ENST00000556102 BCORQ6W2J9 1755 aa25.12■■□□□ 1.61
CDKN3-209ENST00000556102 KDM2BQ8NHM5 1336 aa25.12■■□□□ 1.61
CDKN3-209ENST00000556102 TNRC6CQ9HCJ0 1690 aaKnown RBP25.1■■□□□ 1.61
CDKN3-209ENST00000556102 RASSF7Q02833 373 aa25.1■■□□□ 1.61
CDKN3-209ENST00000556102 MCM10Q7L590 875 aa25.1■■□□□ 1.61
CDKN3-209ENST00000556102 PDZRN3Q9UPQ7 1066 aa25.1■■□□□ 1.61
CDKN3-209ENST00000556102 CAMTA2O94983 1202 aa25.09■■□□□ 1.61
CDKN3-209ENST00000556102 USP16Q9Y5T5 823 aa25.09■■□□□ 1.61
CDKN3-209ENST00000556102 ZC3H4Q9UPT8 1303 aaKnown RBP25.09■■□□□ 1.61
CDKN3-209ENST00000556102 CCDC88AQ3V6T2 1871 aa25.09■■□□□ 1.61
CDKN3-209ENST00000556102 HTATSF1O43719 755 aaKnown RBP25.08■■□□□ 1.61
CDKN3-209ENST00000556102 APLP1P51693 650 aa25.08■■□□□ 1.61
CDKN3-209ENST00000556102 PRR5LQ6MZQ0 368 aa25.08■■□□□ 1.61
CDKN3-209ENST00000556102 C16orf71Q8IYS4 520 aaPredicted RBP25.08■■□□□ 1.61
CDKN3-209ENST00000556102 RBM46Q8TBY0 533 aaKnown RBP25.08■■□□□ 1.61
CDKN3-209ENST00000556102 BRIP1Q9BX63 1249 aa25.08■■□□□ 1.61
CDKN3-209ENST00000556102 COL11A2P13942 1736 aaPredicted RBP25.08■■□□□ 1.61
CDKN3-209ENST00000556102 SNRPA1P09661 255 aaKnown RBP25.07■■□□□ 1.6
CDKN3-209ENST00000556102 LMNB1P20700 586 aa25.07■■□□□ 1.6
CDKN3-209ENST00000556102 PDE6BP35913 854 aa25.07■■□□□ 1.6
CDKN3-209ENST00000556102 DZIP3Q86Y13 1208 aaKnown RBP25.07■■□□□ 1.6
CDKN3-209ENST00000556102 DCTN1Q14203 1278 aa25.06■■□□□ 1.6
CDKN3-209ENST00000556102 SETDB2Q96T68 719 aa25.06■■□□□ 1.6
CDKN3-209ENST00000556102 PRAMEF22A3QJZ6 481 aa25.05■■□□□ 1.6
CDKN3-209ENST00000556102 DLG5Q8TDM6 1919 aa25.04■■□□□ 1.6
CDKN3-209ENST00000556102 TIAM2Q8IVF5 1701 aa25.04■■□□□ 1.6
CDKN3-209ENST00000556102 PIP4K2AP48426 406 aaPredicted RBP25.04■■□□□ 1.6
CDKN3-209ENST00000556102 PRELPP51888 382 aa25.04■■□□□ 1.6
CDKN3-209ENST00000556102 CCDC24Q8N4L8 307 aa25.04■■□□□ 1.6
CDKN3-209ENST00000556102 CNBD1Q8NA66 436 aa25.04■■□□□ 1.6
CDKN3-209ENST00000556102 ZNF622Q969S3 477 aaKnown RBP eCLIP25.04■■□□□ 1.6
CDKN3-209ENST00000556102 NFKBIEO00221 500 aa25.03■■□□□ 1.6
CDKN3-209ENST00000556102 RRAGCQ9HB90 399 aa25.03■■□□□ 1.6
CDKN3-209ENST00000556102 NPHP1O15259 732 aa25.02■■□□□ 1.6
CDKN3-209ENST00000556102 TAF7Q15545 349 aaPredicted RBP25.02■■□□□ 1.6
CDKN3-209ENST00000556102 CLEC4GQ6UXB4 293 aa25.02■■□□□ 1.6
CDKN3-209ENST00000556102 FER1L6Q2WGJ9 1857 aa25.02■■□□□ 1.6
CDKN3-209ENST00000556102 NEFMP07197 916 aa25.01■■□□□ 1.59
CDKN3-209ENST00000556102 ST5P78524 1137 aa25.01■■□□□ 1.59
CDKN3-209ENST00000556102 FSTL1Q12841 308 aa25.01■■□□□ 1.59
CDKN3-209ENST00000556102 WDR90Q96KV7 1748 aa25■■□□□ 1.59
CDKN3-209ENST00000556102 LAMB4A4D0S4 1761 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms