RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 NARFQ9UHQ1 456 aa15.72■□□□□ 0.11
VRK1-204ENST00000555351 ZBTB1Q9Y2K1 713 aa15.72■□□□□ 0.11
VRK1-204ENST00000555351 KIAA1551Q9HCM1 1747 aa15.71■□□□□ 0.11
VRK1-204ENST00000555351 A0A087WZG4 1122 aa15.71■□□□□ 0.11
VRK1-204ENST00000555351 TM4SF1P30408 202 aa15.71■□□□□ 0.11
VRK1-204ENST00000555351 ZEB1P37275 1124 aaPredicted RBP15.71■□□□□ 0.11
VRK1-204ENST00000555351 EIF5P55010 431 aaKnown RBP15.71■□□□□ 0.11
VRK1-204ENST00000555351 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
VRK1-204ENST00000555351 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.1
VRK1-204ENST00000555351 MYBBP1AQ9BQG0 1328 aaKnown RBP15.7■□□□□ 0.1
VRK1-204ENST00000555351 FKBP8Q14318 412 aa15.7■□□□□ 0.1
VRK1-204ENST00000555351 SRP68Q9UHB9 627 aaKnown RBP15.7■□□□□ 0.1
VRK1-204ENST00000555351 IL6STP40189 918 aaPredicted RBP15.69■□□□□ 0.1
VRK1-204ENST00000555351 TAF7Q15545 349 aaPredicted RBP15.69■□□□□ 0.1
VRK1-204ENST00000555351 MCM10Q7L590 875 aa15.69■□□□□ 0.1
VRK1-204ENST00000555351 DLG5Q8TDM6 1919 aa15.68■□□□□ 0.1
VRK1-204ENST00000555351 UTRNP46939 3433 aa15.68■□□□□ 0.1
VRK1-204ENST00000555351 NFE2L2Q16236 605 aa15.68■□□□□ 0.1
VRK1-204ENST00000555351 USPL1Q5W0Q7 1092 aa15.68■□□□□ 0.1
VRK1-204ENST00000555351 ZNF784Q8NCA9 323 aaPredicted RBP15.68■□□□□ 0.1
VRK1-204ENST00000555351 PNISRQ8TF01 805 aaKnown RBP15.68■□□□□ 0.1
VRK1-204ENST00000555351 NRXN2Q9P2S2 1712 aa15.68■□□□□ 0.1
VRK1-204ENST00000555351 MAPK8IP3Q9UPT6 1336 aa15.68■□□□□ 0.1
VRK1-204ENST00000555351 POLRMTO00411 1230 aaKnown RBP15.67■□□□□ 0.1
VRK1-204ENST00000555351 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
VRK1-204ENST00000555351 CANXP27824 592 aaKnown RBP15.67■□□□□ 0.1
VRK1-204ENST00000555351 DDR1Q08345 913 aa15.67■□□□□ 0.1
VRK1-204ENST00000555351 SCN7AQ01118 1682 aa15.67■□□□□ 0.1
VRK1-204ENST00000555351 BRCA1P38398 1863 aaKnown RBP15.66■□□□□ 0.1
VRK1-204ENST00000555351 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
VRK1-204ENST00000555351 N4BP2Q86UW6 1770 aaPredicted RBP15.65■□□□□ 0.1
VRK1-204ENST00000555351 RGL2O15211 777 aa15.65■□□□□ 0.1
VRK1-204ENST00000555351 KCNQ3O43525 872 aa15.65■□□□□ 0.1
VRK1-204ENST00000555351 NPM2Q86SE8 214 aaKnown RBP15.65■□□□□ 0.1
VRK1-204ENST00000555351 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
VRK1-204ENST00000555351 DCTN1Q14203 1278 aa15.64■□□□□ 0.09
VRK1-204ENST00000555351 NFIXQ14938 502 aa15.64■□□□□ 0.09
VRK1-204ENST00000555351 GOLGB1Q14789 3259 aaKnown RBP15.63■□□□□ 0.09
VRK1-204ENST00000555351 A0A0G2JLW4 131 aa15.63■□□□□ 0.09
VRK1-204ENST00000555351 A1BGP04217 495 aa15.63■□□□□ 0.09
VRK1-204ENST00000555351 KCNA3P22001 575 aa15.63■□□□□ 0.09
VRK1-204ENST00000555351 PRKRIP1Q9H875 184 aaPredicted RBP15.63■□□□□ 0.09
VRK1-204ENST00000555351 BABAM1Q9NWV8 329 aa15.63■□□□□ 0.09
VRK1-204ENST00000555351 AFDNP55196 1824 aaKnown RBP15.63■□□□□ 0.09
VRK1-204ENST00000555351 LAMB4A4D0S4 1761 aa15.62■□□□□ 0.09
VRK1-204ENST00000555351 ARFGEF1Q9Y6D6 1849 aa15.62■□□□□ 0.09
VRK1-204ENST00000555351 DPEP1P16444 411 aa15.62■□□□□ 0.09
VRK1-204ENST00000555351 LMOD3Q0VAK6 560 aa15.62■□□□□ 0.09
VRK1-204ENST00000555351 PIM2Q9P1W9 311 aa15.62■□□□□ 0.09
VRK1-204ENST00000555351 USP16Q9Y5T5 823 aa15.62■□□□□ 0.09
VRK1-204ENST00000555351 BCORQ6W2J9 1755 aa15.62■□□□□ 0.09
VRK1-204ENST00000555351 ADCY9O60503 1353 aa15.62■□□□□ 0.09
VRK1-204ENST00000555351 SERPINB2P05120 415 aa15.61■□□□□ 0.09
VRK1-204ENST00000555351 CLEC4GQ6UXB4 293 aa15.61■□□□□ 0.09
VRK1-204ENST00000555351 PDZRN3Q9UPQ7 1066 aa15.61■□□□□ 0.09
VRK1-204ENST00000555351 CAMTA2O94983 1202 aa15.6■□□□□ 0.09
VRK1-204ENST00000555351 BCS1LQ9Y276 419 aa15.6■□□□□ 0.09
VRK1-204ENST00000555351 CARMIL3Q8ND23 1372 aa15.6■□□□□ 0.09
VRK1-204ENST00000555351 DLEC1Q9Y238 1755 aa15.59■□□□□ 0.09
VRK1-204ENST00000555351 TMPOP42166 694 aaKnown RBP15.59■□□□□ 0.09
VRK1-204ENST00000555351 WDR43Q15061 677 aaKnown RBP eCLIP15.59■□□□□ 0.09
VRK1-204ENST00000555351 DZIP3Q86Y13 1208 aaKnown RBP15.59■□□□□ 0.09
VRK1-204ENST00000555351 TBC1D2BQ9UPU7 963 aa15.59■□□□□ 0.09
VRK1-204ENST00000555351 GIGYF1O75420 1035 aaPredicted RBP15.58■□□□□ 0.08
VRK1-204ENST00000555351 RIPK4P57078 832 aa15.58■□□□□ 0.08
VRK1-204ENST00000555351 EIF4A1P60842 406 aaKnown RBP15.58■□□□□ 0.08
VRK1-204ENST00000555351 DALRD3Q5D0E6 543 aaKnown RBP15.58■□□□□ 0.08
VRK1-204ENST00000555351 RUNDC1Q96C34 613 aa15.58■□□□□ 0.08
VRK1-204ENST00000555351 ZNF652Q9Y2D9 606 aa15.58■□□□□ 0.08
VRK1-204ENST00000555351 PRAMEF22A3QJZ6 481 aa15.57■□□□□ 0.08
VRK1-204ENST00000555351 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
VRK1-204ENST00000555351 SETDB2Q96T68 719 aa15.57■□□□□ 0.08
VRK1-204ENST00000555351 BRIP1Q9BX63 1249 aa15.57■□□□□ 0.08
VRK1-204ENST00000555351 ZNF330Q9Y3S2 320 aaPredicted RBP15.57■□□□□ 0.08
VRK1-204ENST00000555351 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
VRK1-204ENST00000555351 NBPF26B4DH59 902 aa15.56■□□□□ 0.08
VRK1-204ENST00000555351 NBPF10Q6P3W6 841 aaKnown RBP15.56■□□□□ 0.08
VRK1-204ENST00000555351 NBPF15Q8N660 670 aa15.56■□□□□ 0.08
VRK1-204ENST00000555351 MIS18AQ9NYP9 233 aa15.56■□□□□ 0.08
VRK1-204ENST00000555351 ATP10DQ9P241 1426 aa15.56■□□□□ 0.08
VRK1-204ENST00000555351 PDE6BP35913 854 aa15.55■□□□□ 0.08
VRK1-204ENST00000555351 THUMPD2Q9BTF0 503 aaKnown RBP15.55■□□□□ 0.08
VRK1-204ENST00000555351 H0YIN7 160 aa15.54■□□□□ 0.08
VRK1-204ENST00000555351 CHRNA5P30532 468 aa15.54■□□□□ 0.08
VRK1-204ENST00000555351 PRR5LQ6MZQ0 368 aa15.54■□□□□ 0.08
VRK1-204ENST00000555351 BICDL1Q6ZP65 573 aa15.54■□□□□ 0.08
VRK1-204ENST00000555351 ARHGAP27Q6ZUM4 889 aa15.54■□□□□ 0.08
VRK1-204ENST00000555351 TSPYL4Q9UJ04 414 aa15.54■□□□□ 0.08
VRK1-204ENST00000555351 WWC3Q9ULE0 1092 aa15.54■□□□□ 0.08
VRK1-204ENST00000555351 ADAMTS8Q9UP79 889 aa15.54■□□□□ 0.08
VRK1-204ENST00000555351 ANKRD31Q8N7Z5 1873 aa15.53■□□□□ 0.08
VRK1-204ENST00000555351 ERVV-1B6SEH8 477 aa15.53■□□□□ 0.08
VRK1-204ENST00000555351 CNBD1Q8NA66 436 aa15.53■□□□□ 0.08
VRK1-204ENST00000555351 ST5P78524 1137 aa15.52■□□□□ 0.08
VRK1-204ENST00000555351 C2CD5Q86YS7 1000 aa15.52■□□□□ 0.08
VRK1-204ENST00000555351 TTLL6Q8N841 843 aa15.52■□□□□ 0.08
VRK1-204ENST00000555351 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
VRK1-204ENST00000555351 C1QTNF8P60827 252 aa15.51■□□□□ 0.07
VRK1-204ENST00000555351 GPBP1L1Q9HC44 474 aaPredicted RBP15.51■□□□□ 0.07
VRK1-204ENST00000555351 CHL1O00533 1208 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms