RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 ZNF790Q6PG37 636 aa17.14■□□□□ 0.33
PABPN1-205ENST00000555295 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
PABPN1-205ENST00000555295 A0A0G2JLW4 131 aa17.13■□□□□ 0.33
PABPN1-205ENST00000555295 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
PABPN1-205ENST00000555295 GPBP1L1Q9HC44 474 aaPredicted RBP17.13■□□□□ 0.33
PABPN1-205ENST00000555295 NARFQ9UHQ1 456 aa17.13■□□□□ 0.33
PABPN1-205ENST00000555295 ZBTB1Q9Y2K1 713 aa17.13■□□□□ 0.33
PABPN1-205ENST00000555295 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
PABPN1-205ENST00000555295 DPEP1P16444 411 aa17.12■□□□□ 0.33
PABPN1-205ENST00000555295 CANXP27824 592 aaKnown RBP17.12■□□□□ 0.33
PABPN1-205ENST00000555295 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
PABPN1-205ENST00000555295 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
PABPN1-205ENST00000555295 DDR1Q08345 913 aa17.11■□□□□ 0.33
PABPN1-205ENST00000555295 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
PABPN1-205ENST00000555295 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
PABPN1-205ENST00000555295 PIM2Q9P1W9 311 aa17.11■□□□□ 0.33
PABPN1-205ENST00000555295 CEMIPQ8WUJ3 1361 aa17.11■□□□□ 0.33
PABPN1-205ENST00000555295 N4BP2Q86UW6 1770 aaPredicted RBP17.1■□□□□ 0.33
PABPN1-205ENST00000555295 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
PABPN1-205ENST00000555295 ZNF330Q9Y3S2 320 aaPredicted RBP17.1■□□□□ 0.33
PABPN1-205ENST00000555295 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
PABPN1-205ENST00000555295 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
PABPN1-205ENST00000555295 ARHGAP27Q6ZUM4 889 aa17.09■□□□□ 0.33
PABPN1-205ENST00000555295 ADCY9O60503 1353 aa17.09■□□□□ 0.33
PABPN1-205ENST00000555295 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.32
PABPN1-205ENST00000555295 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
PABPN1-205ENST00000555295 TM4SF1P30408 202 aa17.08■□□□□ 0.32
PABPN1-205ENST00000555295 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
PABPN1-205ENST00000555295 PNNQ9H307 717 aaKnown RBP17.08■□□□□ 0.32
PABPN1-205ENST00000555295 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
PABPN1-205ENST00000555295 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
PABPN1-205ENST00000555295 EIF5P55010 431 aaKnown RBP17.07■□□□□ 0.32
PABPN1-205ENST00000555295 NFIXQ14938 502 aa17.07■□□□□ 0.32
PABPN1-205ENST00000555295 IL6STP40189 918 aaPredicted RBP17.06■□□□□ 0.32
PABPN1-205ENST00000555295 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
PABPN1-205ENST00000555295 NPHP1O15259 732 aa17.05■□□□□ 0.32
PABPN1-205ENST00000555295 SERPINB2P05120 415 aa17.05■□□□□ 0.32
PABPN1-205ENST00000555295 MCM10Q7L590 875 aa17.05■□□□□ 0.32
PABPN1-205ENST00000555295 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
PABPN1-205ENST00000555295 BICDL1Q6ZP65 573 aa17.04■□□□□ 0.32
PABPN1-205ENST00000555295 CHRNA5P30532 468 aa17.03■□□□□ 0.32
PABPN1-205ENST00000555295 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
PABPN1-205ENST00000555295 KCNA3P22001 575 aa17.02■□□□□ 0.32
PABPN1-205ENST00000555295 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
PABPN1-205ENST00000555295 BCL2L12Q9HB09 334 aa17.02■□□□□ 0.32
PABPN1-205ENST00000555295 PDZRN3Q9UPQ7 1066 aa17.02■□□□□ 0.32
PABPN1-205ENST00000555295 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
PABPN1-205ENST00000555295 CARMIL3Q8ND23 1372 aa17.02■□□□□ 0.31
PABPN1-205ENST00000555295 SCN7AQ01118 1682 aa17.01■□□□□ 0.31
PABPN1-205ENST00000555295 ARFGEF1Q9Y6D6 1849 aa17.01■□□□□ 0.31
PABPN1-205ENST00000555295 H0YIN7 160 aa17.01■□□□□ 0.31
PABPN1-205ENST00000555295 A1BGP04217 495 aa17.01■□□□□ 0.31
PABPN1-205ENST00000555295 RALBP1Q15311 655 aa17.01■□□□□ 0.31
PABPN1-205ENST00000555295 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
PABPN1-205ENST00000555295 ZNF652Q9Y2D9 606 aa17.01■□□□□ 0.31
PABPN1-205ENST00000555295 KCNQ3O43525 872 aa17■□□□□ 0.31
PABPN1-205ENST00000555295 DCTN1Q14203 1278 aa17■□□□□ 0.31
PABPN1-205ENST00000555295 DZIP3Q86Y13 1208 aaKnown RBP17■□□□□ 0.31
PABPN1-205ENST00000555295 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
PABPN1-205ENST00000555295 SETDB2Q96T68 719 aa17■□□□□ 0.31
PABPN1-205ENST00000555295 NRXN2Q9P2S2 1712 aa16.99■□□□□ 0.31
PABPN1-205ENST00000555295 PDE6BP35913 854 aa16.99■□□□□ 0.31
PABPN1-205ENST00000555295 C9orf131Q5VYM1 1079 aa16.99■□□□□ 0.31
PABPN1-205ENST00000555295 TBC1D9BQ66K14 1250 aa16.99■□□□□ 0.31
PABPN1-205ENST00000555295 TTLL6Q8N841 843 aa16.99■□□□□ 0.31
PABPN1-205ENST00000555295 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
PABPN1-205ENST00000555295 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
PABPN1-205ENST00000555295 ST5P78524 1137 aa16.98■□□□□ 0.31
PABPN1-205ENST00000555295 NFE2L2Q16236 605 aa16.98■□□□□ 0.31
PABPN1-205ENST00000555295 CNBD1Q8NA66 436 aa16.98■□□□□ 0.31
PABPN1-205ENST00000555295 USP16Q9Y5T5 823 aa16.98■□□□□ 0.31
PABPN1-205ENST00000555295 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
PABPN1-205ENST00000555295 RNF181Q9P0P0 153 aa16.97■□□□□ 0.31
PABPN1-205ENST00000555295 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.31
PABPN1-205ENST00000555295 CAMTA2O94983 1202 aa16.96■□□□□ 0.31
PABPN1-205ENST00000555295 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
PABPN1-205ENST00000555295 C16orf71Q8IYS4 520 aaPredicted RBP16.95■□□□□ 0.3
PABPN1-205ENST00000555295 ZNF622Q969S3 477 aaKnown RBP eCLIP16.95■□□□□ 0.31e-7■■□□□ 12.8
PABPN1-205ENST00000555295 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
PABPN1-205ENST00000555295 DLEC1Q9Y238 1755 aa16.94■□□□□ 0.3
PABPN1-205ENST00000555295 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
PABPN1-205ENST00000555295 RGL2O15211 777 aa16.94■□□□□ 0.3
PABPN1-205ENST00000555295 LMOD3Q0VAK6 560 aa16.94■□□□□ 0.3
PABPN1-205ENST00000555295 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
PABPN1-205ENST00000555295 NBPF5PQ86XG9 351 aaPredicted RBP16.94■□□□□ 0.3
PABPN1-205ENST00000555295 ZC3H4Q9UPT8 1303 aaKnown RBP16.94■□□□□ 0.3
PABPN1-205ENST00000555295 BCORQ6W2J9 1755 aa16.93■□□□□ 0.3
PABPN1-205ENST00000555295 PIP4K2AP48426 406 aaPredicted RBP16.93■□□□□ 0.3
PABPN1-205ENST00000555295 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
PABPN1-205ENST00000555295 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
PABPN1-205ENST00000555295 KIF3CO14782 793 aa16.92■□□□□ 0.3
PABPN1-205ENST00000555295 HSPA6P17066 643 aa16.92■□□□□ 0.3
PABPN1-205ENST00000555295 LMNB1P20700 586 aa16.92■□□□□ 0.3
PABPN1-205ENST00000555295 MIS18AQ9NYP9 233 aa16.92■□□□□ 0.3
PABPN1-205ENST00000555295 LAMB4A4D0S4 1761 aa16.92■□□□□ 0.3
PABPN1-205ENST00000555295 TOMM70O94826 608 aa16.91■□□□□ 0.3
PABPN1-205ENST00000555295 CNKSR1Q969H4 720 aa16.91■□□□□ 0.3
PABPN1-205ENST00000555295 DLG5Q8TDM6 1919 aa16.91■□□□□ 0.3
PABPN1-205ENST00000555295 WDR43Q15061 677 aaKnown RBP eCLIP16.9■□□□□ 0.3
PABPN1-205ENST00000555295 SOGA3Q5TF21 947 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms