RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RNF181Q9P0P0 153 aa18.83■□□□□ 0.6
SPTLC2-202ENST00000554365 CYP19A1P11511 503 aaPredicted RBP18.82■□□□□ 0.6
SPTLC2-202ENST00000554365 ADAMTS7Q9UKP4 1686 aa18.82■□□□□ 0.6
SPTLC2-202ENST00000554365 SOS1Q07889 1333 aaPredicted RBP18.81■□□□□ 0.6
SPTLC2-202ENST00000554365 MRC1P22897 1456 aa18.8■□□□□ 0.6
SPTLC2-202ENST00000554365 COL15A1P39059 1388 aa18.8■□□□□ 0.6
SPTLC2-202ENST00000554365 KCPQ6ZWJ8 1503 aa18.79■□□□□ 0.6
SPTLC2-202ENST00000554365 KDM2BQ8NHM5 1336 aa18.79■□□□□ 0.6
SPTLC2-202ENST00000554365 MTHFSDQ2M296 383 aaKnown RBP18.79■□□□□ 0.6
SPTLC2-202ENST00000554365 RBM46Q8TBY0 533 aaKnown RBP18.79■□□□□ 0.6
SPTLC2-202ENST00000554365 ZBTB1Q9Y2K1 713 aa18.79■□□□□ 0.6
SPTLC2-202ENST00000554365 NFIXQ14938 502 aa18.78■□□□□ 0.6
SPTLC2-202ENST00000554365 CC2D1BQ5T0F9 858 aaKnown RBP18.78■□□□□ 0.6
SPTLC2-202ENST00000554365 PRKRIP1Q9H875 184 aaPredicted RBP18.78■□□□□ 0.6
SPTLC2-202ENST00000554365 RRAGCQ9HB90 399 aa18.78■□□□□ 0.6
SPTLC2-202ENST00000554365 NARFQ9UHQ1 456 aa18.78■□□□□ 0.6
SPTLC2-202ENST00000554365 DIAPH1O60610 1272 aaKnown RBP18.77■□□□□ 0.6
SPTLC2-202ENST00000554365 DNAJC5GQ8N7S2 189 aa18.77■□□□□ 0.6
SPTLC2-202ENST00000554365 SERPINB2P05120 415 aa18.76■□□□□ 0.59
SPTLC2-202ENST00000554365 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
SPTLC2-202ENST00000554365 RASSF7Q02833 373 aa18.76■□□□□ 0.59
SPTLC2-202ENST00000554365 MIER1Q8N108 512 aa18.76■□□□□ 0.59
SPTLC2-202ENST00000554365 ANP32CO43423 234 aa18.75■□□□□ 0.59
SPTLC2-202ENST00000554365 HTRA3P83110 453 aa18.75■□□□□ 0.59
SPTLC2-202ENST00000554365 CNGB1Q14028 1251 aaPredicted RBP18.75■□□□□ 0.59
SPTLC2-202ENST00000554365 BCL2L12Q9HB09 334 aa18.75■□□□□ 0.59
SPTLC2-202ENST00000554365 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
SPTLC2-202ENST00000554365 FSTL1Q12841 308 aa18.74■□□□□ 0.59
SPTLC2-202ENST00000554365 BICDL1Q6ZP65 573 aa18.74■□□□□ 0.59
SPTLC2-202ENST00000554365 TTC5Q8N0Z6 440 aa18.74■□□□□ 0.59
SPTLC2-202ENST00000554365 VSIG10Q8N0Z9 540 aa18.74■□□□□ 0.59
SPTLC2-202ENST00000554365 AFDNP55196 1824 aaKnown RBP18.74■□□□□ 0.59
SPTLC2-202ENST00000554365 WDR90Q96KV7 1748 aa18.73■□□□□ 0.59
SPTLC2-202ENST00000554365 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
SPTLC2-202ENST00000554365 STARD3NLO95772 234 aa18.72■□□□□ 0.59
SPTLC2-202ENST00000554365 RALBP1Q15311 655 aa18.72■□□□□ 0.59
SPTLC2-202ENST00000554365 C2CD5Q86YS7 1000 aa18.72■□□□□ 0.59
SPTLC2-202ENST00000554365 NRXN2Q9P2S2 1712 aa18.71■□□□□ 0.59
SPTLC2-202ENST00000554365 SBF1O95248 1867 aa18.71■□□□□ 0.59
SPTLC2-202ENST00000554365 TNRC6CQ9HCJ0 1690 aaKnown RBP18.71■□□□□ 0.59
SPTLC2-202ENST00000554365 TEFQ10587 303 aa18.71■□□□□ 0.59
SPTLC2-202ENST00000554365 TTLL6Q8N841 843 aa18.71■□□□□ 0.59
SPTLC2-202ENST00000554365 ZNF330Q9Y3S2 320 aaPredicted RBP18.71■□□□□ 0.59
SPTLC2-202ENST00000554365 CARMIL3Q8ND23 1372 aa18.7■□□□□ 0.58
SPTLC2-202ENST00000554365 H0YIN7 160 aa18.7■□□□□ 0.58
SPTLC2-202ENST00000554365 LMNB1P20700 586 aa18.7■□□□□ 0.58
SPTLC2-202ENST00000554365 UBR2Q8IWV8 1755 aa18.7■□□□□ 0.58
SPTLC2-202ENST00000554365 A0A087WZG4 1122 aa18.69■□□□□ 0.58
SPTLC2-202ENST00000554365 PRELPP51888 382 aa18.69■□□□□ 0.58
SPTLC2-202ENST00000554365 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
SPTLC2-202ENST00000554365 DLEC1Q9Y238 1755 aa18.68■□□□□ 0.58
SPTLC2-202ENST00000554365 GNAT3A8MTJ3 354 aa18.68■□□□□ 0.58
SPTLC2-202ENST00000554365 SMC1BQ8NDV3 1235 aa18.68■□□□□ 0.58
SPTLC2-202ENST00000554365 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
SPTLC2-202ENST00000554365 KLRG1Q96E93 195 aa18.68■□□□□ 0.58
SPTLC2-202ENST00000554365 ZNF496Q96IT1 587 aaPredicted RBP18.68■□□□□ 0.58
SPTLC2-202ENST00000554365 ZC3H4Q9UPT8 1303 aaKnown RBP18.68■□□□□ 0.58
SPTLC2-202ENST00000554365 TBC1D9BQ66K14 1250 aa18.67■□□□□ 0.58
SPTLC2-202ENST00000554365 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
SPTLC2-202ENST00000554365 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
SPTLC2-202ENST00000554365 ZNF622Q969S3 477 aaKnown RBP eCLIP18.67■□□□□ 0.585e-7■□□□□ 10.2
SPTLC2-202ENST00000554365 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
SPTLC2-202ENST00000554365 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
SPTLC2-202ENST00000554365 HEG1Q9ULI3 1381 aa18.67■□□□□ 0.58
SPTLC2-202ENST00000554365 COL3A1P02461 1466 aaPredicted RBP18.66■□□□□ 0.58
SPTLC2-202ENST00000554365 GLTPD2A6NH11 291 aa18.66■□□□□ 0.58
SPTLC2-202ENST00000554365 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
SPTLC2-202ENST00000554365 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
SPTLC2-202ENST00000554365 TEX13AQ9BXU3 409 aaPredicted RBP18.66■□□□□ 0.58
SPTLC2-202ENST00000554365 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
SPTLC2-202ENST00000554365 NFKBIEO00221 500 aa18.65■□□□□ 0.58
SPTLC2-202ENST00000554365 VEGFAP15692 232 aaPredicted RBP18.65■□□□□ 0.58
SPTLC2-202ENST00000554365 PDE6BP35913 854 aa18.64■□□□□ 0.57
SPTLC2-202ENST00000554365 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.57
SPTLC2-202ENST00000554365 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 NPHP1O15259 732 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 C21orf2O43822 256 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 A1BGP04217 495 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 CCDC184Q52MB2 194 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 PRR5LQ6MZQ0 368 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 JMYQ8N9B5 988 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 BRIP1Q9BX63 1249 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
SPTLC2-202ENST00000554365 ANKRD31Q8N7Z5 1873 aa18.61■□□□□ 0.57
SPTLC2-202ENST00000554365 BTBD11A6QL63 1104 aa18.61■□□□□ 0.57
SPTLC2-202ENST00000554365 CCER2I3L3R5 266 aa18.61■□□□□ 0.57
SPTLC2-202ENST00000554365 DPY19L2Q6NUT2 758 aa18.61■□□□□ 0.57
SPTLC2-202ENST00000554365 SETDB2Q96T68 719 aa18.61■□□□□ 0.57
SPTLC2-202ENST00000554365 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
SPTLC2-202ENST00000554365 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
SPTLC2-202ENST00000554365 KCNQ3O43525 872 aa18.6■□□□□ 0.57
SPTLC2-202ENST00000554365 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
SPTLC2-202ENST00000554365 CNBD1Q8NA66 436 aa18.6■□□□□ 0.57
SPTLC2-202ENST00000554365 CCDC88AQ3V6T2 1871 aa18.6■□□□□ 0.57
SPTLC2-202ENST00000554365 CEMIPQ8WUJ3 1361 aa18.59■□□□□ 0.57
SPTLC2-202ENST00000554365 CAMTA2O94983 1202 aa18.59■□□□□ 0.57
SPTLC2-202ENST00000554365 ERFEQ4G0M1 354 aa18.59■□□□□ 0.57
SPTLC2-202ENST00000554365 DZIP3Q86Y13 1208 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms