RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 POLD1P28340 1107 aa37.21■■■■□ 3.55
PCNX1-206ENST00000554292 PTGER2P43116 358 aa37.2■■■■□ 3.55
PCNX1-206ENST00000554292 TSPYL4Q9UJ04 414 aa37.2■■■■□ 3.55
PCNX1-206ENST00000554292 LAMB4A4D0S4 1761 aa37.19■■■■□ 3.54
PCNX1-206ENST00000554292 SRCAPQ6ZRS2 3230 aa37.19■■■■□ 3.54
PCNX1-206ENST00000554292 CALD1Q05682 793 aaKnown RBP37.18■■■■□ 3.54
PCNX1-206ENST00000554292 SMIM5Q71RC9 77 aa37.18■■■■□ 3.54
PCNX1-206ENST00000554292 RFC4P35249 363 aa37.17■■■■□ 3.54
PCNX1-206ENST00000554292 SGIP1Q9BQI5 828 aa37.17■■■■□ 3.54
PCNX1-206ENST00000554292 FAM9BQ8IZU0 186 aa37.16■■■■□ 3.54
PCNX1-206ENST00000554292 ARHGEF1Q92888 912 aaKnown RBP37.16■■■■□ 3.54
PCNX1-206ENST00000554292 ZBTB1Q9Y2K1 713 aa37.16■■■■□ 3.54
PCNX1-206ENST00000554292 SOS1Q07889 1333 aaPredicted RBP37.15■■■■□ 3.54
PCNX1-206ENST00000554292 DIEXFQ68CQ4 756 aaKnown RBP37.15■■■■□ 3.54
PCNX1-206ENST00000554292 CCER2I3L3R5 266 aa37.13■■■■□ 3.53
PCNX1-206ENST00000554292 EIF4A1P60842 406 aaKnown RBP37.13■■■■□ 3.53
PCNX1-206ENST00000554292 MSL1Q68DK7 614 aa37.12■■■■□ 3.53
PCNX1-206ENST00000554292 CANXP27824 592 aaKnown RBP37.11■■■■□ 3.53
PCNX1-206ENST00000554292 NCBP3Q53F19 620 aaKnown RBP37.11■■■■□ 3.53
PCNX1-206ENST00000554292 COL15A1P39059 1388 aa37.11■■■■□ 3.53
PCNX1-206ENST00000554292 ARXQ96QS3 562 aa37.1■■■■□ 3.53
PCNX1-206ENST00000554292 LAS1LQ9Y4W2 734 aaKnown RBP37.1■■■■□ 3.53
PCNX1-206ENST00000554292 USP16Q9Y5T5 823 aa37.1■■■■□ 3.53
PCNX1-206ENST00000554292 CHL1O00533 1208 aa37.09■■■■□ 3.53
PCNX1-206ENST00000554292 CCDC27Q2M243 656 aa37.08■■■■□ 3.53
PCNX1-206ENST00000554292 NPM2Q86SE8 214 aaKnown RBP37.08■■■■□ 3.53
PCNX1-206ENST00000554292 GIGYF1O75420 1035 aaPredicted RBP37.07■■■■□ 3.52
PCNX1-206ENST00000554292 CFAP44Q96MT7 982 aa37.07■■■■□ 3.52
PCNX1-206ENST00000554292 USP42Q9H9J4 1324 aaKnown RBP37.07■■■■□ 3.52
PCNX1-206ENST00000554292 A0A087WZG4 1122 aa37.06■■■■□ 3.52
PCNX1-206ENST00000554292 PRAMEF22A3QJZ6 481 aa37.06■■■■□ 3.52
PCNX1-206ENST00000554292 IL6STP40189 918 aaPredicted RBP37.06■■■■□ 3.52
PCNX1-206ENST00000554292 NLGN1Q8N2Q7 840 aa37.06■■■■□ 3.52
PCNX1-206ENST00000554292 ZPR1O75312 459 aa37.05■■■■□ 3.52
PCNX1-206ENST00000554292 A1BGP04217 495 aa37.05■■■■□ 3.52
PCNX1-206ENST00000554292 EIF5P55010 431 aaKnown RBP37.05■■■■□ 3.52
PCNX1-206ENST00000554292 GNAI1P63096 354 aa37.04■■■■□ 3.52
PCNX1-206ENST00000554292 IFT57Q9NWB7 429 aa37.04■■■■□ 3.52
PCNX1-206ENST00000554292 GYS1P13807 737 aa37.02■■■■□ 3.52
PCNX1-206ENST00000554292 NGEFQ8N5V2 710 aa37.02■■■■□ 3.52
PCNX1-206ENST00000554292 NARFQ9UHQ1 456 aa37.01■■■■□ 3.52
PCNX1-206ENST00000554292 ZNF330Q9Y3S2 320 aaPredicted RBP37.01■■■■□ 3.52
PCNX1-206ENST00000554292 SRP68Q9UHB9 627 aaKnown RBP37■■■■□ 3.51
PCNX1-206ENST00000554292 WWC1Q8IX03 1113 aa36.99■■■■□ 3.51
PCNX1-206ENST00000554292 ZNF853P0CG23 659 aa36.98■■■■□ 3.51
PCNX1-206ENST00000554292 SCN7AQ01118 1682 aa36.97■■■■□ 3.51
PCNX1-206ENST00000554292 ERBB4Q15303 1308 aa36.96■■■■□ 3.51
PCNX1-206ENST00000554292 USPL1Q5W0Q7 1092 aa36.96■■■■□ 3.51
PCNX1-206ENST00000554292 FHDC1Q9C0D6 1143 aaPredicted RBP36.96■■■■□ 3.51
PCNX1-206ENST00000554292 MBIPQ9NS73 344 aa36.96■■■■□ 3.51
PCNX1-206ENST00000554292 MMP10P09238 476 aa36.95■■■■□ 3.51
PCNX1-206ENST00000554292 SENP3-EIF4A1A0A087X0R7 540 aa36.94■■■■□ 3.5
PCNX1-206ENST00000554292 IL16Q14005 1332 aa36.93■■■■□ 3.5
PCNX1-206ENST00000554292 BCORQ6W2J9 1755 aa36.93■■■■□ 3.5
PCNX1-206ENST00000554292 HOXB7P09629 217 aa36.92■■■■□ 3.5
PCNX1-206ENST00000554292 PIP4K2AP48426 406 aaPredicted RBP36.92■■■■□ 3.5
PCNX1-206ENST00000554292 KLHL34Q8N239 644 aa36.92■■■■□ 3.5
PCNX1-206ENST00000554292 NBPF26B4DH59 902 aa36.91■■■■□ 3.5
PCNX1-206ENST00000554292 FKBP8Q14318 412 aa36.91■■■■□ 3.5
PCNX1-206ENST00000554292 NBPF10Q6P3W6 841 aaKnown RBP36.91■■■■□ 3.5
PCNX1-206ENST00000554292 NBPF15Q8N660 670 aa36.91■■■■□ 3.5
PCNX1-206ENST00000554292 DZIP3Q86Y13 1208 aaKnown RBP36.9■■■■□ 3.5
PCNX1-206ENST00000554292 SYT17Q9BSW7 474 aa36.9■■■■□ 3.5
PCNX1-206ENST00000554292 SALL2Q9Y467 1007 aaPredicted RBP36.9■■■■□ 3.5
PCNX1-206ENST00000554292 PARP3Q9Y6F1 533 aa36.9■■■■□ 3.5
PCNX1-206ENST00000554292 WDR63Q8IWG1 891 aa36.89■■■■□ 3.5
PCNX1-206ENST00000554292 TBC1D2BQ9UPU7 963 aa36.89■■■■□ 3.5
PCNX1-206ENST00000554292 EIF2S2P20042 333 aaKnown RBP36.88■■■■□ 3.49
PCNX1-206ENST00000554292 MIER1Q8N108 512 aa36.88■■■■□ 3.49
PCNX1-206ENST00000554292 KRT24Q2M2I5 525 aa36.86■■■■□ 3.49
PCNX1-206ENST00000554292 BCL2L12Q9HB09 334 aa36.85■■■■□ 3.49
PCNX1-206ENST00000554292 CD2APQ9Y5K6 639 aa36.85■■■■□ 3.49
PCNX1-206ENST00000554292 CAMTA2O94983 1202 aa36.83■■■■□ 3.49
PCNX1-206ENST00000554292 DUSP27Q5VZP5 1158 aa36.83■■■■□ 3.49
PCNX1-206ENST00000554292 ZNF652Q9Y2D9 606 aa36.83■■■■□ 3.49
PCNX1-206ENST00000554292 RGL2O15211 777 aa36.82■■■■□ 3.48
PCNX1-206ENST00000554292 MYL6BP14649 208 aa36.82■■■■□ 3.48
PCNX1-206ENST00000554292 HDGFL1Q5TGJ6 251 aa36.82■■■■□ 3.48
PCNX1-206ENST00000554292 KIF13BQ9NQT8 1826 aa36.82■■■■□ 3.48
PCNX1-206ENST00000554292 TM4SF1P30408 202 aa36.81■■■■□ 3.48
PCNX1-206ENST00000554292 CHMP4AQ9BY43 222 aa36.81■■■■□ 3.48
PCNX1-206ENST00000554292 NFIXQ14938 502 aa36.8■■■■□ 3.48
PCNX1-206ENST00000554292 DDR1Q08345 913 aa36.79■■■■□ 3.48
PCNX1-206ENST00000554292 CLEC4GQ6UXB4 293 aa36.79■■■■□ 3.48
PCNX1-206ENST00000554292 KIF6Q6ZMV9 814 aa36.79■■■■□ 3.48
PCNX1-206ENST00000554292 AFDNP55196 1824 aaKnown RBP36.78■■■■□ 3.48
PCNX1-206ENST00000554292 DCAF8L1A6NGE4 600 aa36.78■■■■□ 3.48
PCNX1-206ENST00000554292 TSR2Q969E8 191 aaKnown RBP36.78■■■■□ 3.48
PCNX1-206ENST00000554292 C10orf71Q711Q0 1435 aa36.77■■■■□ 3.48
PCNX1-206ENST00000554292 POLRMTO00411 1230 aaKnown RBP36.77■■■■□ 3.48
PCNX1-206ENST00000554292 NECTIN2Q92692 538 aa36.77■■■■□ 3.48
PCNX1-206ENST00000554292 DDX21Q9NR30 783 aaKnown RBP eCLIP36.77■■■■□ 3.48
PCNX1-206ENST00000554292 NRXN2Q9P2S2 1712 aa36.76■■■■□ 3.47
PCNX1-206ENST00000554292 PDIA6Q15084 440 aa36.75■■■■□ 3.47
PCNX1-206ENST00000554292 NUP98P52948 1817 aa36.75■■■■□ 3.47
PCNX1-206ENST00000554292 TBC1D9BQ66K14 1250 aa36.74■■■■□ 3.47
PCNX1-206ENST00000554292 BICDL1Q6ZP65 573 aa36.74■■■■□ 3.47
PCNX1-206ENST00000554292 DBF4Q9UBU7 674 aaPredicted RBP36.74■■■■□ 3.47
PCNX1-206ENST00000554292 CARMIL3Q8ND23 1372 aa36.74■■■■□ 3.47
PCNX1-206ENST00000554292 ERVV-1B6SEH8 477 aa36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms