RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 COL15A1P39059 1388 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 ANKRD31Q8N7Z5 1873 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 ZPR1O75312 459 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 PPP2R1AP30153 589 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 TM4SF1P30408 202 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 DDR1Q08345 913 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 TEFQ10587 303 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 FKBP8Q14318 412 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 TTC5Q8N0Z6 440 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 IL17REQ8NFR9 667 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 TEX13AQ9BXU3 409 aaPredicted RBP8.86□□□□□ -0.99
SLIRP-203ENST00000554074 SRP68Q9UHB9 627 aaKnown RBP8.86□□□□□ -0.99
SLIRP-203ENST00000554074 NARFQ9UHQ1 456 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
SLIRP-203ENST00000554074 A0A0G2JLW4 131 aa8.85□□□□□ -0.99
SLIRP-203ENST00000554074 POLRMTO00411 1230 aaKnown RBP8.85□□□□□ -0.99
SLIRP-203ENST00000554074 STARD3NLO95772 234 aa8.85□□□□□ -0.99
SLIRP-203ENST00000554074 DPEP1P16444 411 aa8.85□□□□□ -0.99
SLIRP-203ENST00000554074 KCNA3P22001 575 aa8.85□□□□□ -0.99
SLIRP-203ENST00000554074 PRKAR2BP31323 418 aa8.85□□□□□ -0.99
SLIRP-203ENST00000554074 ZEB1P37275 1124 aaPredicted RBP8.85□□□□□ -0.99
SLIRP-203ENST00000554074 ZNF790Q6PG37 636 aa8.85□□□□□ -0.99
SLIRP-203ENST00000554074 ZBTB1Q9Y2K1 713 aa8.85□□□□□ -0.99
SLIRP-203ENST00000554074 DICER1Q9UPY3 1922 aaKnown RBP8.85□□□□□ -0.99
SLIRP-203ENST00000554074 KDM3BQ7LBC6 1761 aa8.84□□□□□ -0.99
SLIRP-203ENST00000554074 ARFGEF2Q9Y6D5 1785 aa8.84□□□□□ -0.99
SLIRP-203ENST00000554074 A0A087WZG4 1122 aa8.84□□□□□ -0.99
SLIRP-203ENST00000554074 FCHSD2O94868 740 aa8.84□□□□□ -0.99
SLIRP-203ENST00000554074 EIF5P55010 431 aaKnown RBP8.84□□□□□ -0.99
SLIRP-203ENST00000554074 USPL1Q5W0Q7 1092 aa8.84□□□□□ -0.99
SLIRP-203ENST00000554074 ZNF496Q96IT1 587 aaPredicted RBP8.84□□□□□ -0.99
SLIRP-203ENST00000554074 PHACTR3Q96KR7 559 aa8.84□□□□□ -0.99
SLIRP-203ENST00000554074 GPBP1L1Q9HC44 474 aaPredicted RBP8.84□□□□□ -0.99
SLIRP-203ENST00000554074 PIM2Q9P1W9 311 aa8.84□□□□□ -0.99
SLIRP-203ENST00000554074 BCS1LQ9Y276 419 aa8.84□□□□□ -0.99
SLIRP-203ENST00000554074 HTATSF1O43719 755 aaKnown RBP8.83□□□□□ -1
SLIRP-203ENST00000554074 U2AF1L5P0DN76 240 aaPredicted RBP8.83□□□□□ -1
SLIRP-203ENST00000554074 U2AF1Q01081 240 aaKnown RBP eCLIP8.83□□□□□ -1
SLIRP-203ENST00000554074 NFIXQ14938 502 aa8.83□□□□□ -1
SLIRP-203ENST00000554074 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
SLIRP-203ENST00000554074 WWC3Q9ULE0 1092 aa8.83□□□□□ -1
SLIRP-203ENST00000554074 CACNA1SQ13698 1873 aa8.83□□□□□ -1
SLIRP-203ENST00000554074 TNRC6CQ9HCJ0 1690 aaKnown RBP8.82□□□□□ -1
SLIRP-203ENST00000554074 IL6STP40189 918 aaPredicted RBP8.82□□□□□ -1
SLIRP-203ENST00000554074 CNGB1Q14028 1251 aaPredicted RBP8.82□□□□□ -1
SLIRP-203ENST00000554074 DALRD3Q5D0E6 543 aaKnown RBP8.82□□□□□ -1
SLIRP-203ENST00000554074 PPP4R3CPQ6ZMV5 832 aa8.82□□□□□ -1
SLIRP-203ENST00000554074 BCL2L12Q9HB09 334 aa8.82□□□□□ -1
SLIRP-203ENST00000554074 FER1L6Q2WGJ9 1857 aa8.82□□□□□ -1
SLIRP-203ENST00000554074 COL11A2P13942 1736 aaPredicted RBP8.82□□□□□ -1
SLIRP-203ENST00000554074 NUP98P52948 1817 aa8.82□□□□□ -1
SLIRP-203ENST00000554074 BTBD11A6QL63 1104 aa8.81□□□□□ -1
SLIRP-203ENST00000554074 SERPINB2P05120 415 aa8.81□□□□□ -1
SLIRP-203ENST00000554074 CANXP27824 592 aaKnown RBP8.81□□□□□ -1
SLIRP-203ENST00000554074 ARHGAP27Q6ZUM4 889 aa8.81□□□□□ -1
SLIRP-203ENST00000554074 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
SLIRP-203ENST00000554074 TIAM2Q8IVF5 1701 aa8.8□□□□□ -1
SLIRP-203ENST00000554074 RGL2O15211 777 aa8.8□□□□□ -1
SLIRP-203ENST00000554074 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
SLIRP-203ENST00000554074 CEP350Q5VT06 3117 aa8.8□□□□□ -1
SLIRP-203ENST00000554074 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
SLIRP-203ENST00000554074 CARMIL3Q8ND23 1372 aa8.79□□□□□ -1
SLIRP-203ENST00000554074 KIF3CO14782 793 aa8.79□□□□□ -1
SLIRP-203ENST00000554074 KCNQ3O43525 872 aa8.79□□□□□ -1
SLIRP-203ENST00000554074 NEFMP07197 916 aa8.79□□□□□ -1
SLIRP-203ENST00000554074 CHRNA5P30532 468 aa8.79□□□□□ -1
SLIRP-203ENST00000554074 SLX4Q8IY92 1834 aa8.79□□□□□ -1
SLIRP-203ENST00000554074 CAMTA2O94983 1202 aa8.78□□□□□ -1
SLIRP-203ENST00000554074 SNRPA1P09661 255 aaKnown RBP8.78□□□□□ -1
SLIRP-203ENST00000554074 TAF7Q15545 349 aaPredicted RBP8.78□□□□□ -1
SLIRP-203ENST00000554074 C9orf131Q5VYM1 1079 aa8.78□□□□□ -1
SLIRP-203ENST00000554074 TBC1D9BQ66K14 1250 aa8.78□□□□□ -1
SLIRP-203ENST00000554074 CLEC4GQ6UXB4 293 aa8.78□□□□□ -1
SLIRP-203ENST00000554074 MCM10Q7L590 875 aa8.78□□□□□ -1
SLIRP-203ENST00000554074 NPM2Q86SE8 214 aaKnown RBP8.78□□□□□ -1
SLIRP-203ENST00000554074 ZNF526Q8TF50 670 aaPredicted RBP8.78□□□□□ -1
SLIRP-203ENST00000554074 PNNQ9H307 717 aaKnown RBP8.78□□□□□ -1
SLIRP-203ENST00000554074 H0YIN7 160 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 A1BGP04217 495 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 HSPA6P17066 643 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 PDE6BP35913 854 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 RALBP1Q15311 655 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 DZIP3Q86Y13 1208 aaKnown RBP8.77□□□□□ -1.01
SLIRP-203ENST00000554074 TTLL6Q8N841 843 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 PNISRQ8TF01 805 aaKnown RBP8.77□□□□□ -1.01
SLIRP-203ENST00000554074 PLEKHF1Q96S99 279 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 BRIP1Q9BX63 1249 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 USP16Q9Y5T5 823 aa8.77□□□□□ -1.01
SLIRP-203ENST00000554074 TOMM70O94826 608 aa8.76□□□□□ -1.01
SLIRP-203ENST00000554074 DCTN1Q14203 1278 aa8.76□□□□□ -1.01
SLIRP-203ENST00000554074 NFE2L2Q16236 605 aa8.76□□□□□ -1.01
SLIRP-203ENST00000554074 PRR5LQ6MZQ0 368 aa8.76□□□□□ -1.01
SLIRP-203ENST00000554074 BICDL1Q6ZP65 573 aa8.76□□□□□ -1.01
SLIRP-203ENST00000554074 C2CD5Q86YS7 1000 aa8.76□□□□□ -1.01
SLIRP-203ENST00000554074 SETDB2Q96T68 719 aa8.76□□□□□ -1.01
SLIRP-203ENST00000554074 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
SLIRP-203ENST00000554074 ZNF330Q9Y3S2 320 aaPredicted RBP8.76□□□□□ -1.01
SLIRP-203ENST00000554074 WDR90Q96KV7 1748 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms