RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 KCNQ3O43525 872 aa23.84■■□□□ 1.41
PNN-202ENST00000553331 STARD3NLO95772 234 aa23.84■■□□□ 1.41
PNN-202ENST00000553331 NEFMP07197 916 aa23.84■■□□□ 1.41
PNN-202ENST00000553331 DCTN1Q14203 1278 aa23.84■■□□□ 1.41
PNN-202ENST00000553331 HEG1Q9ULI3 1381 aa23.83■■□□□ 1.41
PNN-202ENST00000553331 KIF13BQ9NQT8 1826 aa23.83■■□□□ 1.41
PNN-202ENST00000553331 A0A0G2JLW4 131 aa23.83■■□□□ 1.41
PNN-202ENST00000553331 ZNF330Q9Y3S2 320 aaPredicted RBP23.83■■□□□ 1.41
PNN-202ENST00000553331 FMNL2Q96PY5 1086 aa23.82■■□□□ 1.4
PNN-202ENST00000553331 DDR1Q08345 913 aa23.81■■□□□ 1.4
PNN-202ENST00000553331 C10orf71Q711Q0 1435 aa23.81■■□□□ 1.4
PNN-202ENST00000553331 PXDNLA1KZ92 1463 aa23.81■■□□□ 1.4
PNN-202ENST00000553331 TGFB2P61812 414 aa23.8■■□□□ 1.4
PNN-202ENST00000553331 TEX13AQ9BXU3 409 aaPredicted RBP23.8■■□□□ 1.4
PNN-202ENST00000553331 NARFQ9UHQ1 456 aa23.8■■□□□ 1.4
PNN-202ENST00000553331 DPEP1P16444 411 aa23.79■■□□□ 1.4
PNN-202ENST00000553331 RALBP1Q15311 655 aa23.79■■□□□ 1.4
PNN-202ENST00000553331 KIAA1551Q9HCM1 1747 aa23.79■■□□□ 1.4
PNN-202ENST00000553331 DLG5Q8TDM6 1919 aa23.78■■□□□ 1.4
PNN-202ENST00000553331 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
PNN-202ENST00000553331 TM4SF1P30408 202 aa23.77■■□□□ 1.4
PNN-202ENST00000553331 GOLGB1Q14789 3259 aaKnown RBP23.77■■□□□ 1.4
PNN-202ENST00000553331 POLRMTO00411 1230 aaKnown RBP23.76■■□□□ 1.39
PNN-202ENST00000553331 HTATSF1O43719 755 aaKnown RBP23.76■■□□□ 1.39
PNN-202ENST00000553331 A1BGP04217 495 aa23.76■■□□□ 1.39
PNN-202ENST00000553331 A0A087WZG4 1122 aa23.75■■□□□ 1.39
PNN-202ENST00000553331 EIF5P55010 431 aaKnown RBP23.75■■□□□ 1.39
PNN-202ENST00000553331 NFIXQ14938 502 aa23.75■■□□□ 1.39
PNN-202ENST00000553331 BICDL1Q6ZP65 573 aa23.75■■□□□ 1.39
PNN-202ENST00000553331 NPM2Q86SE8 214 aaKnown RBP23.75■■□□□ 1.39
PNN-202ENST00000553331 PLEKHF1Q96S99 279 aa23.75■■□□□ 1.39
PNN-202ENST00000553331 MIS18AQ9NYP9 233 aa23.75■■□□□ 1.39
PNN-202ENST00000553331 MAPK8IP3Q9UPT6 1336 aa23.75■■□□□ 1.39
PNN-202ENST00000553331 PRAMEF22A3QJZ6 481 aa23.74■■□□□ 1.39
PNN-202ENST00000553331 PNNQ9H307 717 aaKnown RBP23.74■■□□□ 1.39
PNN-202ENST00000553331 BCL2L12Q9HB09 334 aa23.74■■□□□ 1.39
PNN-202ENST00000553331 TBC1D2BQ9UPU7 963 aa23.74■■□□□ 1.39
PNN-202ENST00000553331 PIP4K2AP48426 406 aaPredicted RBP23.73■■□□□ 1.39
PNN-202ENST00000553331 TAF7Q15545 349 aaPredicted RBP23.73■■□□□ 1.39
PNN-202ENST00000553331 USP16Q9Y5T5 823 aa23.73■■□□□ 1.39
PNN-202ENST00000553331 AFDNP55196 1824 aaKnown RBP23.73■■□□□ 1.39
PNN-202ENST00000553331 NFE2L2Q16236 605 aa23.72■■□□□ 1.39
PNN-202ENST00000553331 CHRNA5P30532 468 aa23.71■■□□□ 1.39
PNN-202ENST00000553331 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
PNN-202ENST00000553331 MYBBP1AQ9BQG0 1328 aaKnown RBP23.7■■□□□ 1.38
PNN-202ENST00000553331 SERPINB2P05120 415 aa23.7■■□□□ 1.38
PNN-202ENST00000553331 SNRPA1P09661 255 aaKnown RBP23.7■■□□□ 1.38
PNN-202ENST00000553331 ARHGAP27Q6ZUM4 889 aa23.7■■□□□ 1.38
PNN-202ENST00000553331 THUMPD2Q9BTF0 503 aaKnown RBP23.7■■□□□ 1.38
PNN-202ENST00000553331 BRCA1P38398 1863 aaKnown RBP23.69■■□□□ 1.38
PNN-202ENST00000553331 KCNA3P22001 575 aa23.69■■□□□ 1.38
PNN-202ENST00000553331 PIM2Q9P1W9 311 aa23.69■■□□□ 1.38
PNN-202ENST00000553331 TBC1D9BQ66K14 1250 aa23.68■■□□□ 1.38
PNN-202ENST00000553331 ZNF526Q8TF50 670 aaPredicted RBP23.68■■□□□ 1.38
PNN-202ENST00000553331 ATP10DQ9P241 1426 aa23.67■■□□□ 1.38
PNN-202ENST00000553331 DALRD3Q5D0E6 543 aaKnown RBP23.66■■□□□ 1.38
PNN-202ENST00000553331 DZIP3Q86Y13 1208 aaKnown RBP23.66■■□□□ 1.38
PNN-202ENST00000553331 SCN7AQ01118 1682 aa23.66■■□□□ 1.38
PNN-202ENST00000553331 GIGYF1O75420 1035 aaPredicted RBP23.65■■□□□ 1.38
PNN-202ENST00000553331 PNISRQ8TF01 805 aaKnown RBP23.65■■□□□ 1.38
PNN-202ENST00000553331 RIPK4P57078 832 aa23.64■■□□□ 1.37
PNN-202ENST00000553331 CCDC146Q8IYE0 955 aa23.64■■□□□ 1.37
PNN-202ENST00000553331 NRXN2Q9P2S2 1712 aa23.64■■□□□ 1.37
PNN-202ENST00000553331 CAMTA2O94983 1202 aa23.63■■□□□ 1.37
PNN-202ENST00000553331 CCDC24Q8N4L8 307 aa23.63■■□□□ 1.37
PNN-202ENST00000553331 ARFGEF1Q9Y6D6 1849 aa23.63■■□□□ 1.37
PNN-202ENST00000553331 KDM3BQ7LBC6 1761 aa23.63■■□□□ 1.37
PNN-202ENST00000553331 NPHP1O15259 732 aa23.62■■□□□ 1.37
PNN-202ENST00000553331 WDR43Q15061 677 aaKnown RBP eCLIP23.62■■□□□ 1.372e-7■□□□□ 9
PNN-202ENST00000553331 RRP7AQ9Y3A4 280 aaKnown RBP23.62■■□□□ 1.37
PNN-202ENST00000553331 NBPF26B4DH59 902 aa23.61■■□□□ 1.37
PNN-202ENST00000553331 NEUROD2Q15784 382 aa23.61■■□□□ 1.37
PNN-202ENST00000553331 NBPF10Q6P3W6 841 aaKnown RBP23.61■■□□□ 1.37
PNN-202ENST00000553331 C2CD5Q86YS7 1000 aa23.61■■□□□ 1.37
PNN-202ENST00000553331 NBPF15Q8N660 670 aa23.61■■□□□ 1.37
PNN-202ENST00000553331 SETDB2Q96T68 719 aa23.61■■□□□ 1.37
PNN-202ENST00000553331 GPBP1L1Q9HC44 474 aaPredicted RBP23.61■■□□□ 1.37
PNN-202ENST00000553331 CARMIL3Q8ND23 1372 aa23.61■■□□□ 1.37
PNN-202ENST00000553331 BCORQ6W2J9 1755 aa23.6■■□□□ 1.37
PNN-202ENST00000553331 C1QTNF8P60827 252 aa23.6■■□□□ 1.37
PNN-202ENST00000553331 NGEFQ8N5V2 710 aa23.6■■□□□ 1.37
PNN-202ENST00000553331 ADCY9O60503 1353 aa23.6■■□□□ 1.37
PNN-202ENST00000553331 TMPOP42166 694 aaKnown RBP23.59■■□□□ 1.37
PNN-202ENST00000553331 LAMB4A4D0S4 1761 aa23.59■■□□□ 1.37
PNN-202ENST00000553331 H0YIN7 160 aa23.58■■□□□ 1.37
PNN-202ENST00000553331 EIF4A1P60842 406 aaKnown RBP23.58■■□□□ 1.37
PNN-202ENST00000553331 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.37
PNN-202ENST00000553331 TSPYL4Q9UJ04 414 aa23.58■■□□□ 1.37
PNN-202ENST00000553331 PRR5LQ6MZQ0 368 aa23.57■■□□□ 1.36
PNN-202ENST00000553331 ANKRD31Q8N7Z5 1873 aa23.56■■□□□ 1.36
PNN-202ENST00000553331 CNBD1Q8NA66 436 aa23.56■■□□□ 1.36
PNN-202ENST00000553331 ZNF622Q969S3 477 aaKnown RBP eCLIP23.56■■□□□ 1.364e-8■■□□□ 12.4
PNN-202ENST00000553331 ZNF652Q9Y2D9 606 aa23.56■■□□□ 1.36
PNN-202ENST00000553331 DLEC1Q9Y238 1755 aa23.55■■□□□ 1.36
PNN-202ENST00000553331 ZNF316A6NFI3 1004 aaPredicted RBP23.55■■□□□ 1.36
PNN-202ENST00000553331 LMOD3Q0VAK6 560 aa23.55■■□□□ 1.36
PNN-202ENST00000553331 MYL6BP14649 208 aa23.54■■□□□ 1.36
PNN-202ENST00000553331 PDE6BP35913 854 aa23.54■■□□□ 1.36
PNN-202ENST00000553331 C9orf131Q5VYM1 1079 aa23.54■■□□□ 1.36
PNN-202ENST00000553331 TTLL6Q8N841 843 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms