RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 HSPA1LP34931 641 aa24.63■■□□□ 1.53
RBFOX1-215ENST00000553186 FNBP4Q8N3X1 1017 aaPredicted RBP24.63■■□□□ 1.53
RBFOX1-215ENST00000553186 SMC5Q8IY18 1101 aa24.63■■□□□ 1.53
RBFOX1-215ENST00000553186 TMOD3Q9NYL9 352 aa24.63■■□□□ 1.53
RBFOX1-215ENST00000553186 PAPPAQ13219 1627 aa24.63■■□□□ 1.53
RBFOX1-215ENST00000553186 KCPQ6ZWJ8 1503 aa24.62■■□□□ 1.53
RBFOX1-215ENST00000553186 PI4KAP2A4QPH2 592 aa24.61■■□□□ 1.53
RBFOX1-215ENST00000553186 PI4KAP1Q8N8J0 262 aa24.61■■□□□ 1.53
RBFOX1-215ENST00000553186 ADCY9O60503 1353 aa24.61■■□□□ 1.53
RBFOX1-215ENST00000553186 PIGBQ92521 554 aa24.61■■□□□ 1.53
RBFOX1-215ENST00000553186 UBR2Q8IWV8 1755 aa24.61■■□□□ 1.53
RBFOX1-215ENST00000553186 ATP10DQ9P241 1426 aa24.6■■□□□ 1.53
RBFOX1-215ENST00000553186 DDB1Q16531 1140 aa24.6■■□□□ 1.53
RBFOX1-215ENST00000553186 PDZRN3Q9UPQ7 1066 aa24.6■■□□□ 1.53
RBFOX1-215ENST00000553186 CCDC9Q9Y3X0 531 aaKnown RBP24.6■■□□□ 1.53
RBFOX1-215ENST00000553186 DNAAF4Q8WXU2 420 aa24.6■■□□□ 1.53
RBFOX1-215ENST00000553186 VPS72Q15906 364 aa24.59■■□□□ 1.53
RBFOX1-215ENST00000553186 LRP10Q7Z4F1 713 aa24.59■■□□□ 1.53
RBFOX1-215ENST00000553186 N4BP2Q86UW6 1770 aaPredicted RBP24.58■■□□□ 1.53
RBFOX1-215ENST00000553186 RGS3P49796 1198 aa24.58■■□□□ 1.53
RBFOX1-215ENST00000553186 BEND3Q5T5X7 828 aa24.57■■□□□ 1.52
RBFOX1-215ENST00000553186 KSR2Q6VAB6 950 aa24.57■■□□□ 1.52
RBFOX1-215ENST00000553186 ANKRD44Q8N8A2 993 aa24.57■■□□□ 1.52
RBFOX1-215ENST00000553186 BCL9O00512 1426 aa24.57■■□□□ 1.52
RBFOX1-215ENST00000553186 PTCD1O75127 700 aaKnown RBP24.56■■□□□ 1.52
RBFOX1-215ENST00000553186 CEP85Q6P2H3 762 aa24.56■■□□□ 1.52
RBFOX1-215ENST00000553186 RPAP2Q8IXW5 612 aaPredicted RBP24.56■■□□□ 1.52
RBFOX1-215ENST00000553186 USP44Q9H0E7 712 aa24.56■■□□□ 1.52
RBFOX1-215ENST00000553186 ASAP1Q9ULH1 1129 aa24.56■■□□□ 1.52
RBFOX1-215ENST00000553186 SRCIN1Q9C0H9 1055 aa24.56■■□□□ 1.52
RBFOX1-215ENST00000553186 ATG3Q9NT62 314 aa24.55■■□□□ 1.52
RBFOX1-215ENST00000553186 MAP3K2Q9Y2U5 619 aa24.55■■□□□ 1.52
RBFOX1-215ENST00000553186 GNAI3P08754 354 aa24.54■■□□□ 1.52
RBFOX1-215ENST00000553186 MYL6BP14649 208 aa24.54■■□□□ 1.52
RBFOX1-215ENST00000553186 MARCH10Q8NA82 808 aaPredicted RBP24.54■■□□□ 1.52
RBFOX1-215ENST00000553186 RBM19Q9Y4C8 960 aaKnown RBP24.54■■□□□ 1.52
RBFOX1-215ENST00000553186 GCC1Q96CN9 775 aa24.53■■□□□ 1.52
RBFOX1-215ENST00000553186 LAMB4A4D0S4 1761 aa24.53■■□□□ 1.52
RBFOX1-215ENST00000553186 DDX58O95786 925 aaKnown RBP24.53■■□□□ 1.52
RBFOX1-215ENST00000553186 GNAI2P04899 355 aa24.53■■□□□ 1.52
RBFOX1-215ENST00000553186 AIMP1Q12904 312 aaKnown RBP24.53■■□□□ 1.52
RBFOX1-215ENST00000553186 USP21Q9UK80 565 aa24.53■■□□□ 1.52
RBFOX1-215ENST00000553186 ERBB4Q15303 1308 aa24.53■■□□□ 1.52
RBFOX1-215ENST00000553186 ITGB4P16144 1822 aa24.52■■□□□ 1.52
RBFOX1-215ENST00000553186 PIP4K2AP48426 406 aaPredicted RBP24.52■■□□□ 1.52
RBFOX1-215ENST00000553186 COPS6Q7L5N1 327 aa24.52■■□□□ 1.52
RBFOX1-215ENST00000553186 XAGE3Q8WTP9 111 aa24.52■■□□□ 1.52
RBFOX1-215ENST00000553186 NUCB1Q02818 461 aa24.52■■□□□ 1.52
RBFOX1-215ENST00000553186 FAM98CQ17RN3 349 aaKnown RBP24.52■■□□□ 1.52
RBFOX1-215ENST00000553186 NBPF26B4DH59 902 aa24.51■■□□□ 1.51
RBFOX1-215ENST00000553186 PRIM1P49642 420 aaKnown RBP24.51■■□□□ 1.51
RBFOX1-215ENST00000553186 NBPF14Q5TI25 921 aa24.51■■□□□ 1.51
RBFOX1-215ENST00000553186 NBPF10Q6P3W6 841 aaKnown RBP24.51■■□□□ 1.51
RBFOX1-215ENST00000553186 NBPF15Q8N660 670 aa24.51■■□□□ 1.51
RBFOX1-215ENST00000553186 VSIG10Q8N0Z9 540 aa24.5■■□□□ 1.51
RBFOX1-215ENST00000553186 DCTPP1Q9H773 170 aa24.49■■□□□ 1.51
RBFOX1-215ENST00000553186 PDE4AP27815 886 aa24.49■■□□□ 1.51
RBFOX1-215ENST00000553186 SYTL4Q96C24 671 aaPredicted RBP24.49■■□□□ 1.51
RBFOX1-215ENST00000553186 ALDH1L1O75891 902 aa24.48■■□□□ 1.51
RBFOX1-215ENST00000553186 A1BGP04217 495 aa24.47■■□□□ 1.51
RBFOX1-215ENST00000553186 UBTFL1P0CB47 393 aaPredicted RBP24.47■■□□□ 1.51
RBFOX1-215ENST00000553186 BACH2Q9BYV9 841 aa24.47■■□□□ 1.51
RBFOX1-215ENST00000553186 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.47■■□□□ 1.51
RBFOX1-215ENST00000553186 LINS1Q8NG48 757 aa24.47■■□□□ 1.51
RBFOX1-215ENST00000553186 LRRFIP2Q9Y608 721 aaKnown RBP24.47■■□□□ 1.51
RBFOX1-215ENST00000553186 DOT1LQ8TEK3 1739 aa24.46■■□□□ 1.51
RBFOX1-215ENST00000553186 NBPF7P0C2Y1 421 aaPredicted RBP24.46■■□□□ 1.51
RBFOX1-215ENST00000553186 ANKRD13DQ6ZTN6 518 aa24.46■■□□□ 1.51
RBFOX1-215ENST00000553186 RIC3Q7Z5B4 369 aa24.46■■□□□ 1.51
RBFOX1-215ENST00000553186 CHD1LQ86WJ1 897 aa24.46■■□□□ 1.51
RBFOX1-215ENST00000553186 MEX3CQ5U5Q3 659 aaKnown RBP24.46■■□□□ 1.51
RBFOX1-215ENST00000553186 CWF19L2Q2TBE0 894 aaKnown RBP24.45■■□□□ 1.5
RBFOX1-215ENST00000553186 SLC4A9Q96Q91 983 aa24.45■■□□□ 1.5
RBFOX1-215ENST00000553186 TEX13AQ9BXU3 409 aaPredicted RBP24.45■■□□□ 1.5
RBFOX1-215ENST00000553186 IGKV5-2P06315 115 aa24.44■■□□□ 1.5
RBFOX1-215ENST00000553186 ANKRD45Q5TZF3 282 aa24.44■■□□□ 1.5
RBFOX1-215ENST00000553186 DNAJC10Q8IXB1 793 aa24.44■■□□□ 1.5
RBFOX1-215ENST00000553186 LNPKQ9C0E8 428 aa24.44■■□□□ 1.5
RBFOX1-215ENST00000553186 IBTKQ9P2D0 1353 aaPredicted RBP24.43■■□□□ 1.5
RBFOX1-215ENST00000553186 HMMRO75330 724 aa24.43■■□□□ 1.5
RBFOX1-215ENST00000553186 ATP8B2P98198 1209 aa24.43■■□□□ 1.5
RBFOX1-215ENST00000553186 RBM42Q9BTD8 480 aaKnown RBP24.43■■□□□ 1.5
RBFOX1-215ENST00000553186 METTL22Q9BUU2 404 aaPredicted RBP24.43■■□□□ 1.5
RBFOX1-215ENST00000553186 ACSBG1Q96GR2 724 aa24.43■■□□□ 1.5
RBFOX1-215ENST00000553186 AFF2P51816 1311 aa24.42■■□□□ 1.5
RBFOX1-215ENST00000553186 PNMA6EA0A0J9YXQ4 647 aa24.42■■□□□ 1.5
RBFOX1-215ENST00000553186 PLBD2Q8NHP8 589 aa24.42■■□□□ 1.5
RBFOX1-215ENST00000553186 C8orf34Q49A92 452 aa24.41■■□□□ 1.5
RBFOX1-215ENST00000553186 FAM161AQ3B820 660 aa24.4■■□□□ 1.5
RBFOX1-215ENST00000553186 UTYO14607 1347 aa24.4■■□□□ 1.5
RBFOX1-215ENST00000553186 NEXNQ0ZGT2 675 aa24.4■■□□□ 1.5
RBFOX1-215ENST00000553186 GJD4Q96KN9 370 aaPredicted RBP24.4■■□□□ 1.5
RBFOX1-215ENST00000553186 KAT6BQ8WYB5 2073 aa24.39■■□□□ 1.5
RBFOX1-215ENST00000553186 NEURL1BA8MQ27 555 aa24.39■■□□□ 1.5
RBFOX1-215ENST00000553186 STARD3NLO95772 234 aa24.39■■□□□ 1.5
RBFOX1-215ENST00000553186 TTLL7Q6ZT98 887 aa24.39■■□□□ 1.5
RBFOX1-215ENST00000553186 MYD88Q99836 296 aa24.39■■□□□ 1.5
RBFOX1-215ENST00000553186 C9orf78Q9NZ63 289 aaPredicted RBP24.39■■□□□ 1.5
RBFOX1-215ENST00000553186 THSD7AQ9UPZ6 1657 aa24.39■■□□□ 1.49
RBFOX1-215ENST00000553186 GRM8O00222 908 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms