RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 TEX13AQ9BXU3 409 aaPredicted RBP12.92□□□□□ -0.34
PFDN5-218ENST00000552742 USP16Q9Y5T5 823 aa12.92□□□□□ -0.34
PFDN5-218ENST00000552742 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
PFDN5-218ENST00000552742 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
PFDN5-218ENST00000552742 A1BGP04217 495 aa12.91□□□□□ -0.34
PFDN5-218ENST00000552742 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
PFDN5-218ENST00000552742 POLD1P28340 1107 aa12.91□□□□□ -0.34
PFDN5-218ENST00000552742 RFC4P35249 363 aa12.91□□□□□ -0.34
PFDN5-218ENST00000552742 LMOD3Q0VAK6 560 aa12.91□□□□□ -0.34
PFDN5-218ENST00000552742 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
PFDN5-218ENST00000552742 ADRA2BP18089 450 aa12.9□□□□□ -0.34
PFDN5-218ENST00000552742 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
PFDN5-218ENST00000552742 ZBTB1Q9Y2K1 713 aa12.9□□□□□ -0.34
PFDN5-218ENST00000552742 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
PFDN5-218ENST00000552742 EIF4A1P60842 406 aaKnown RBP12.89□□□□□ -0.35
PFDN5-218ENST00000552742 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
PFDN5-218ENST00000552742 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
PFDN5-218ENST00000552742 LAS1LQ9Y4W2 734 aaKnown RBP12.89□□□□□ -0.35
PFDN5-218ENST00000552742 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
PFDN5-218ENST00000552742 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-218ENST00000552742 GYS1P13807 737 aa12.88□□□□□ -0.35
PFDN5-218ENST00000552742 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-218ENST00000552742 FAM9BQ8IZU0 186 aa12.88□□□□□ -0.35
PFDN5-218ENST00000552742 CHL1O00533 1208 aa12.87□□□□□ -0.35
PFDN5-218ENST00000552742 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-218ENST00000552742 EIF5P55010 431 aaKnown RBP12.87□□□□□ -0.35
PFDN5-218ENST00000552742 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
PFDN5-218ENST00000552742 NLGN1Q8N2Q7 840 aa12.87□□□□□ -0.35
PFDN5-218ENST00000552742 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
PFDN5-218ENST00000552742 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
PFDN5-218ENST00000552742 C4AP0C0L4 1744 aa12.87□□□□□ -0.35
PFDN5-218ENST00000552742 ZPR1O75312 459 aa12.86□□□□□ -0.35
PFDN5-218ENST00000552742 MMP10P09238 476 aa12.86□□□□□ -0.35
PFDN5-218ENST00000552742 FKBP8Q14318 412 aa12.86□□□□□ -0.35
PFDN5-218ENST00000552742 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-218ENST00000552742 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
PFDN5-218ENST00000552742 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
PFDN5-218ENST00000552742 IL6STP40189 918 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-218ENST00000552742 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
PFDN5-218ENST00000552742 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
PFDN5-218ENST00000552742 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
PFDN5-218ENST00000552742 NARFQ9UHQ1 456 aa12.85□□□□□ -0.35
PFDN5-218ENST00000552742 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
PFDN5-218ENST00000552742 COL15A1P39059 1388 aa12.84□□□□□ -0.35
PFDN5-218ENST00000552742 A0A087WZG4 1122 aa12.84□□□□□ -0.35
PFDN5-218ENST00000552742 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-218ENST00000552742 UTRNP46939 3433 aa12.83□□□□□ -0.36
PFDN5-218ENST00000552742 ZNF853P0CG23 659 aa12.83□□□□□ -0.36
PFDN5-218ENST00000552742 TM4SF1P30408 202 aa12.83□□□□□ -0.36
PFDN5-218ENST00000552742 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
PFDN5-218ENST00000552742 DIEXFQ68CQ4 756 aaKnown RBP12.83□□□□□ -0.36
PFDN5-218ENST00000552742 CFAP44Q96MT7 982 aa12.83□□□□□ -0.36
PFDN5-218ENST00000552742 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
PFDN5-218ENST00000552742 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
PFDN5-218ENST00000552742 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
PFDN5-218ENST00000552742 WWC1Q8IX03 1113 aa12.82□□□□□ -0.36
PFDN5-218ENST00000552742 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
PFDN5-218ENST00000552742 NLGN2Q8NFZ4 835 aa12.82□□□□□ -0.36
PFDN5-218ENST00000552742 MBIPQ9NS73 344 aa12.82□□□□□ -0.36
PFDN5-218ENST00000552742 GNAI1P63096 354 aa12.81□□□□□ -0.36
PFDN5-218ENST00000552742 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
PFDN5-218ENST00000552742 DDR1Q08345 913 aa12.81□□□□□ -0.36
PFDN5-218ENST00000552742 NECTIN2Q92692 538 aa12.81□□□□□ -0.36
PFDN5-218ENST00000552742 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
PFDN5-218ENST00000552742 CD2APQ9Y5K6 639 aa12.81□□□□□ -0.36
PFDN5-218ENST00000552742 PARP3Q9Y6F1 533 aa12.81□□□□□ -0.36
PFDN5-218ENST00000552742 LAMB4A4D0S4 1761 aa12.8□□□□□ -0.36
PFDN5-218ENST00000552742 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
PFDN5-218ENST00000552742 MYL6BP14649 208 aa12.8□□□□□ -0.36
PFDN5-218ENST00000552742 NFIXQ14938 502 aa12.8□□□□□ -0.36
PFDN5-218ENST00000552742 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
PFDN5-218ENST00000552742 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
PFDN5-218ENST00000552742 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
PFDN5-218ENST00000552742 MIER1Q8N108 512 aa12.8□□□□□ -0.36
PFDN5-218ENST00000552742 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
PFDN5-218ENST00000552742 PDIA6Q15084 440 aa12.79□□□□□ -0.36
PFDN5-218ENST00000552742 POLRMTO00411 1230 aaKnown RBP12.78□□□□□ -0.36
PFDN5-218ENST00000552742 ELL2O00472 640 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-218ENST00000552742 ANXA1P04083 346 aa12.78□□□□□ -0.36
PFDN5-218ENST00000552742 PROSER3Q2NL68 480 aa12.78□□□□□ -0.36
PFDN5-218ENST00000552742 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
PFDN5-218ENST00000552742 DUSP27Q5VZP5 1158 aa12.78□□□□□ -0.36
PFDN5-218ENST00000552742 TBC1D9BQ66K14 1250 aa12.78□□□□□ -0.36
PFDN5-218ENST00000552742 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
PFDN5-218ENST00000552742 AFDNP55196 1824 aaKnown RBP12.78□□□□□ -0.36
PFDN5-218ENST00000552742 DCAF8L1A6NGE4 600 aa12.77□□□□□ -0.37
PFDN5-218ENST00000552742 SERPINB2P05120 415 aa12.77□□□□□ -0.37
PFDN5-218ENST00000552742 HLFQ16534 295 aa12.77□□□□□ -0.37
PFDN5-218ENST00000552742 C8orf58Q8NAV2 365 aa12.77□□□□□ -0.37
PFDN5-218ENST00000552742 TSR2Q969E8 191 aaKnown RBP12.77□□□□□ -0.37
PFDN5-218ENST00000552742 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
PFDN5-218ENST00000552742 GPR162Q16538 588 aa12.76□□□□□ -0.37
PFDN5-218ENST00000552742 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
PFDN5-218ENST00000552742 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
PFDN5-218ENST00000552742 SETDB2Q96T68 719 aa12.76□□□□□ -0.37
PFDN5-218ENST00000552742 NUP98P52948 1817 aa12.76□□□□□ -0.37
PFDN5-218ENST00000552742 IL16Q14005 1332 aa12.75□□□□□ -0.37
PFDN5-218ENST00000552742 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
PFDN5-218ENST00000552742 CLEC4GQ6UXB4 293 aa12.75□□□□□ -0.37
PFDN5-218ENST00000552742 LRP10Q7Z4F1 713 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms