RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 TM4SF1P30408 202 aa17.65■□□□□ 0.42
SNRPF-204ENST00000552085 ITGBL1O95965 494 aaPredicted RBP17.64■□□□□ 0.41
SNRPF-204ENST00000552085 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.41
SNRPF-204ENST00000552085 NCAPD2Q15021 1401 aa17.64■□□□□ 0.41
SNRPF-204ENST00000552085 DDNO94850 711 aaPredicted RBP17.63■□□□□ 0.41
SNRPF-204ENST00000552085 FLT4P35916 1363 aa17.63■□□□□ 0.41
SNRPF-204ENST00000552085 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
SNRPF-204ENST00000552085 PHKG2P15735 406 aa17.62■□□□□ 0.41
SNRPF-204ENST00000552085 IFNL2Q8IZJ0 200 aa17.62■□□□□ 0.41
SNRPF-204ENST00000552085 L3MBTL2Q969R5 705 aa17.62■□□□□ 0.41
SNRPF-204ENST00000552085 BEGAINQ9BUH8 593 aa17.61■□□□□ 0.41
SNRPF-204ENST00000552085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNRPF-204ENST00000552085 C2CD5Q86YS7 1000 aa17.6■□□□□ 0.41
SNRPF-204ENST00000552085 PUS7Q96PZ0 661 aaKnown RBP17.6■□□□□ 0.41
SNRPF-204ENST00000552085 MCOLN1Q9GZU1 580 aa17.6■□□□□ 0.41
SNRPF-204ENST00000552085 TAF1DQ9H5J8 278 aaPredicted RBP17.6■□□□□ 0.41
SNRPF-204ENST00000552085 KIF24Q5T7B8 1368 aa17.6■□□□□ 0.41
SNRPF-204ENST00000552085 ADAMTSL1Q8N6G6 1762 aa17.6■□□□□ 0.41
SNRPF-204ENST00000552085 CASP8AP2Q9UKL3 1982 aa17.6■□□□□ 0.41
SNRPF-204ENST00000552085 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
SNRPF-204ENST00000552085 TJP1Q07157 1748 aa17.58■□□□□ 0.41
SNRPF-204ENST00000552085 ABT1Q9ULW3 272 aaKnown RBP17.58■□□□□ 0.4
SNRPF-204ENST00000552085 LTBP1Q14766 1721 aa17.58■□□□□ 0.4
SNRPF-204ENST00000552085 TONSLQ96HA7 1378 aa17.57■□□□□ 0.4
SNRPF-204ENST00000552085 KIF20BQ96Q89 1820 aa17.57■□□□□ 0.4
SNRPF-204ENST00000552085 H0YIN7 160 aa17.57■□□□□ 0.4
SNRPF-204ENST00000552085 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
SNRPF-204ENST00000552085 ERVV-2B6SEH9 535 aa17.56■□□□□ 0.4
SNRPF-204ENST00000552085 EAPPQ56P03 285 aaPredicted RBP17.56■□□□□ 0.4
SNRPF-204ENST00000552085 USPL1Q5W0Q7 1092 aa17.56■□□□□ 0.4
SNRPF-204ENST00000552085 L3MBTL3Q96JM7 780 aaPredicted RBP17.56■□□□□ 0.4
SNRPF-204ENST00000552085 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
SNRPF-204ENST00000552085 LTBP3Q9NS15 1303 aa17.55■□□□□ 0.4
SNRPF-204ENST00000552085 ANKRD31Q8N7Z5 1873 aa17.55■□□□□ 0.4
SNRPF-204ENST00000552085 FYB1O15117 783 aa17.55■□□□□ 0.4
SNRPF-204ENST00000552085 ZPR1O75312 459 aa17.55■□□□□ 0.4
SNRPF-204ENST00000552085 PRPF38BQ5VTL8 546 aaKnown RBP17.55■□□□□ 0.4
SNRPF-204ENST00000552085 TSKSQ9UJT2 592 aa17.55■□□□□ 0.4
SNRPF-204ENST00000552085 CLEC11AQ9Y240 323 aa17.55■□□□□ 0.4
SNRPF-204ENST00000552085 C21orf2O43822 256 aa17.54■□□□□ 0.4
SNRPF-204ENST00000552085 NFIXQ14938 502 aa17.54■□□□□ 0.4
SNRPF-204ENST00000552085 CAPNS2Q96L46 248 aa17.54■□□□□ 0.4
SNRPF-204ENST00000552085 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
SNRPF-204ENST00000552085 ECE1P42892 770 aa17.53■□□□□ 0.4
SNRPF-204ENST00000552085 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
SNRPF-204ENST00000552085 TAOK3Q9H2K8 898 aa17.53■□□□□ 0.4
SNRPF-204ENST00000552085 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.4
SNRPF-204ENST00000552085 TRPM7Q96QT4 1865 aa17.52■□□□□ 0.4
SNRPF-204ENST00000552085 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
SNRPF-204ENST00000552085 SERPINB2P05120 415 aa17.52■□□□□ 0.4
SNRPF-204ENST00000552085 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.39
SNRPF-204ENST00000552085 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.39
SNRPF-204ENST00000552085 DGKZQ13574 1117 aa17.51■□□□□ 0.39
SNRPF-204ENST00000552085 MAP1SQ66K74 1059 aaPredicted RBP17.51■□□□□ 0.39
SNRPF-204ENST00000552085 INTS5Q6P9B9 1019 aaKnown RBP17.51■□□□□ 0.39
SNRPF-204ENST00000552085 PAXIP1Q6ZW49 1069 aaPredicted RBP17.51■□□□□ 0.39
SNRPF-204ENST00000552085 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.391e-8■□□□□ 10.8
SNRPF-204ENST00000552085 GPR101Q96P66 508 aaPredicted RBP17.51■□□□□ 0.39
SNRPF-204ENST00000552085 EYA1Q99502 592 aa17.5■□□□□ 0.39
SNRPF-204ENST00000552085 HACL1Q9UJ83 578 aa17.5■□□□□ 0.39
SNRPF-204ENST00000552085 ARFGEF2Q9Y6D5 1785 aa17.5■□□□□ 0.39
SNRPF-204ENST00000552085 SLX4Q8IY92 1834 aa17.49■□□□□ 0.39
SNRPF-204ENST00000552085 EPHX2P34913 555 aa17.49■□□□□ 0.39
SNRPF-204ENST00000552085 GRM1Q13255 1194 aa17.49■□□□□ 0.39
SNRPF-204ENST00000552085 CYP4F22Q6NT55 531 aa17.49■□□□□ 0.39
SNRPF-204ENST00000552085 PNMA8AQ86V59 439 aaPredicted RBP17.49■□□□□ 0.39
SNRPF-204ENST00000552085 EMILIN1Q9Y6C2 1016 aa17.49■□□□□ 0.39
SNRPF-204ENST00000552085 CA12O43570 354 aa17.48■□□□□ 0.39
SNRPF-204ENST00000552085 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
SNRPF-204ENST00000552085 CABP4P57796 275 aa17.48■□□□□ 0.39
SNRPF-204ENST00000552085 CARD11Q9BXL7 1154 aa17.48■□□□□ 0.39
SNRPF-204ENST00000552085 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
SNRPF-204ENST00000552085 PDZRN3Q9UPQ7 1066 aa17.48■□□□□ 0.39
SNRPF-204ENST00000552085 SOS1Q07889 1333 aaPredicted RBP17.47■□□□□ 0.39
SNRPF-204ENST00000552085 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNRPF-204ENST00000552085 MAP2K2P36507 400 aa17.46■□□□□ 0.39
SNRPF-204ENST00000552085 SOX10P56693 466 aa17.45■□□□□ 0.38
SNRPF-204ENST00000552085 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
SNRPF-204ENST00000552085 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
SNRPF-204ENST00000552085 PDE6BP35913 854 aa17.44■□□□□ 0.38
SNRPF-204ENST00000552085 ZNF541Q9H0D2 1346 aa17.44■□□□□ 0.38
SNRPF-204ENST00000552085 COL15A1P39059 1388 aa17.43■□□□□ 0.38
SNRPF-204ENST00000552085 AOC2O75106 756 aa17.43■□□□□ 0.38
SNRPF-204ENST00000552085 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
SNRPF-204ENST00000552085 WASHC2AQ641Q2 1341 aa17.43■□□□□ 0.38
SNRPF-204ENST00000552085 BRIP1Q9BX63 1249 aa17.42■□□□□ 0.38
SNRPF-204ENST00000552085 RNF123Q5XPI4 1314 aa17.42■□□□□ 0.38
SNRPF-204ENST00000552085 DNAJC10Q8IXB1 793 aa17.41■□□□□ 0.38
SNRPF-204ENST00000552085 CNKSR1Q969H4 720 aa17.41■□□□□ 0.38
SNRPF-204ENST00000552085 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
SNRPF-204ENST00000552085 FMR1Q06787 632 aaKnown RBP eCLIP17.4■□□□□ 0.38
SNRPF-204ENST00000552085 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
SNRPF-204ENST00000552085 SCN11AQ9UI33 1791 aa17.39■□□□□ 0.37
SNRPF-204ENST00000552085 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
SNRPF-204ENST00000552085 CST9Q5W186 159 aa17.39■□□□□ 0.37
SNRPF-204ENST00000552085 PRPF40BQ6NWY9 871 aaKnown RBP17.39■□□□□ 0.37
SNRPF-204ENST00000552085 BICDL1Q6ZP65 573 aa17.39■□□□□ 0.37
SNRPF-204ENST00000552085 STYK1Q6J9G0 422 aa17.38■□□□□ 0.37
SNRPF-204ENST00000552085 GCC1Q96CN9 775 aa17.38■□□□□ 0.37
SNRPF-204ENST00000552085 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms