RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FBXO22Q8NEZ5 403 aa9.47□□□□□ -0.89
PRPF40B-214ENST00000551320 MAP2P11137 1827 aaKnown RBP9.47□□□□□ -0.89
PRPF40B-214ENST00000551320 GABBR2O75899 941 aa9.46□□□□□ -0.9
PRPF40B-214ENST00000551320 MMP10P09238 476 aa9.46□□□□□ -0.9
PRPF40B-214ENST00000551320 HSPA5P11021 654 aaKnown RBP9.46□□□□□ -0.9
PRPF40B-214ENST00000551320 PANK3Q9H999 370 aa9.46□□□□□ -0.9
PRPF40B-214ENST00000551320 SPG7Q9UQ90 795 aa9.46□□□□□ -0.9
PRPF40B-214ENST00000551320 CGNL1Q0VF96 1302 aa9.46□□□□□ -0.9
PRPF40B-214ENST00000551320 WASHC2AQ641Q2 1341 aa9.46□□□□□ -0.9
PRPF40B-214ENST00000551320 UBR3Q6ZT12 1888 aa9.45□□□□□ -0.9
PRPF40B-214ENST00000551320 PTCD1O75127 700 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-214ENST00000551320 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-214ENST00000551320 SRP68Q9UHB9 627 aaKnown RBP9.45□□□□□ -0.9
PRPF40B-214ENST00000551320 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
PRPF40B-214ENST00000551320 GRIN3BO60391 1043 aa9.44□□□□□ -0.9
PRPF40B-214ENST00000551320 SMARCC1Q92922 1105 aaPredicted RBP9.44□□□□□ -0.9
PRPF40B-214ENST00000551320 TRIM35Q9UPQ4 493 aa9.44□□□□□ -0.9
PRPF40B-214ENST00000551320 CD2APQ9Y5K6 639 aa9.44□□□□□ -0.9
PRPF40B-214ENST00000551320 ZNF530Q6P9A1 599 aaPredicted RBP9.43□□□□□ -0.9
PRPF40B-214ENST00000551320 IFNL2Q8IZJ0 200 aa9.43□□□□□ -0.9
PRPF40B-214ENST00000551320 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
PRPF40B-214ENST00000551320 GPBP1L1Q9HC44 474 aaPredicted RBP9.43□□□□□ -0.9
PRPF40B-214ENST00000551320 BCS1LQ9Y276 419 aa9.43□□□□□ -0.9
PRPF40B-214ENST00000551320 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
PRPF40B-214ENST00000551320 KDM6AO15550 1401 aaPredicted RBP9.42□□□□□ -0.9
PRPF40B-214ENST00000551320 NCAPD2Q15021 1401 aa9.42□□□□□ -0.9
PRPF40B-214ENST00000551320 PPP1R37O75864 691 aa9.42□□□□□ -0.9
PRPF40B-214ENST00000551320 DPEP1P16444 411 aa9.42□□□□□ -0.9
PRPF40B-214ENST00000551320 HTRA3P83110 453 aa9.42□□□□□ -0.9
PRPF40B-214ENST00000551320 CDCA8Q53HL2 280 aa9.42□□□□□ -0.9
PRPF40B-214ENST00000551320 SSFA2P28290 1259 aa9.41□□□□□ -0.9
PRPF40B-214ENST00000551320 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
PRPF40B-214ENST00000551320 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
PRPF40B-214ENST00000551320 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
PRPF40B-214ENST00000551320 FLAD1Q8NFF5 587 aa9.41□□□□□ -0.9
PRPF40B-214ENST00000551320 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
PRPF40B-214ENST00000551320 CICQ96RK0 1608 aaPredicted RBP9.41□□□□□ -0.9
PRPF40B-214ENST00000551320 PXDNLA1KZ92 1463 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 ADCY9O60503 1353 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 ANKRD26Q9UPS8 1709 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 ATMINO43313 823 aaPredicted RBP9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 HMOX1P09601 288 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 GYS1P13807 737 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 CHRNA5P30532 468 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 CABP4P57796 275 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 SLC39A6Q13433 755 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 SULT6B1Q6IMI4 303 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 MORC1Q86VD1 984 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 RTCBQ9Y3I0 505 aaKnown RBP9.4□□□□□ -0.9
PRPF40B-214ENST00000551320 KDRP35968 1356 aa9.39□□□□□ -0.91
PRPF40B-214ENST00000551320 KIF24Q5T7B8 1368 aa9.39□□□□□ -0.91
PRPF40B-214ENST00000551320 MYH14Q7Z406 1995 aaKnown RBP9.39□□□□□ -0.91
PRPF40B-214ENST00000551320 KIF3CO14782 793 aa9.39□□□□□ -0.91
PRPF40B-214ENST00000551320 CRKLP46109 303 aaKnown RBP9.39□□□□□ -0.91
PRPF40B-214ENST00000551320 MTHFSP49914 203 aa9.39□□□□□ -0.91
PRPF40B-214ENST00000551320 DDR1Q08345 913 aa9.39□□□□□ -0.91
PRPF40B-214ENST00000551320 NMRK2Q9NPI5 230 aa9.39□□□□□ -0.91
PRPF40B-214ENST00000551320 FCHSD2O94868 740 aa9.38□□□□□ -0.91
PRPF40B-214ENST00000551320 KCNA3P22001 575 aa9.38□□□□□ -0.91
PRPF40B-214ENST00000551320 RFC4P35249 363 aa9.38□□□□□ -0.91
PRPF40B-214ENST00000551320 PLEKHO1Q53GL0 409 aaPredicted RBP9.38□□□□□ -0.91
PRPF40B-214ENST00000551320 DNAJC10Q8IXB1 793 aa9.38□□□□□ -0.91
PRPF40B-214ENST00000551320 CCDC24Q8N4L8 307 aa9.38□□□□□ -0.91
PRPF40B-214ENST00000551320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
PRPF40B-214ENST00000551320 KIAA1551Q9HCM1 1747 aa9.37□□□□□ -0.91
PRPF40B-214ENST00000551320 RPS6KA4O75676 772 aa9.37□□□□□ -0.91
PRPF40B-214ENST00000551320 IL13P35225 146 aa9.37□□□□□ -0.91
PRPF40B-214ENST00000551320 EIF4G2P78344 907 aaKnown RBP eCLIP9.37□□□□□ -0.91
PRPF40B-214ENST00000551320 DCAF5Q96JK2 942 aa9.37□□□□□ -0.91
PRPF40B-214ENST00000551320 ERVV-2B6SEH9 535 aa9.36□□□□□ -0.91
PRPF40B-214ENST00000551320 HSPA6P17066 643 aa9.36□□□□□ -0.91
PRPF40B-214ENST00000551320 CC2D1BQ5T0F9 858 aaKnown RBP9.36□□□□□ -0.91
PRPF40B-214ENST00000551320 INTS5Q6P9B9 1019 aaKnown RBP9.36□□□□□ -0.91
PRPF40B-214ENST00000551320 CCER1Q8TC90 406 aaPredicted RBP9.36□□□□□ -0.91
PRPF40B-214ENST00000551320 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
PRPF40B-214ENST00000551320 PCNTO95613 3336 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 RASSF7Q02833 373 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 C1orf141Q5JVX7 400 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 C9orf131Q5VYM1 1079 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 USPL1Q5W0Q7 1092 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 BICDL1Q6ZP65 573 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 C10orf71Q711Q0 1435 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 NLGN1Q8N2Q7 840 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 DCBLD2Q96PD2 775 aa9.35□□□□□ -0.91
PRPF40B-214ENST00000551320 C4AP0C0L4 1744 aa9.34□□□□□ -0.91
PRPF40B-214ENST00000551320 PRELPP51888 382 aa9.34□□□□□ -0.91
PRPF40B-214ENST00000551320 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
PRPF40B-214ENST00000551320 COL5A3P25940 1745 aaPredicted RBP9.34□□□□□ -0.92
PRPF40B-214ENST00000551320 CNTNAP4Q9C0A0 1308 aa9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 KCPQ6ZWJ8 1503 aa9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 PIP4K2AP48426 406 aaPredicted RBP9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 MTHFSDQ2M296 383 aaKnown RBP9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 RC3H1Q5TC82 1133 aaKnown RBP9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 IFFO2Q5TF58 517 aa9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 ZBTB1Q9Y2K1 713 aa9.33□□□□□ -0.92
PRPF40B-214ENST00000551320 ZNF330Q9Y3S2 320 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms