RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 AMIGO3Q86WK7 504 aa16.95■□□□□ 0.3
RAB5C-206ENST00000550406 QSER1Q2KHR3 1735 aa16.95■□□□□ 0.3
RAB5C-206ENST00000550406 E9PSI1 815 aa16.94■□□□□ 0.3
RAB5C-206ENST00000550406 EXOSC9Q06265 439 aaKnown RBP16.94■□□□□ 0.3
RAB5C-206ENST00000550406 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
RAB5C-206ENST00000550406 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
RAB5C-206ENST00000550406 ELL2O00472 640 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-206ENST00000550406 A1BGP04217 495 aa16.93■□□□□ 0.3
RAB5C-206ENST00000550406 CRKLP46109 303 aaKnown RBP16.93■□□□□ 0.3
RAB5C-206ENST00000550406 RC3H1Q5TC82 1133 aaKnown RBP16.93■□□□□ 0.3
RAB5C-206ENST00000550406 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-206ENST00000550406 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
RAB5C-206ENST00000550406 SLC15A2Q16348 729 aa16.92■□□□□ 0.3
RAB5C-206ENST00000550406 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
RAB5C-206ENST00000550406 NBPF26B4DH59 902 aa16.91■□□□□ 0.3
RAB5C-206ENST00000550406 NBPF14Q5TI25 921 aa16.91■□□□□ 0.3
RAB5C-206ENST00000550406 NBPF10Q6P3W6 841 aaKnown RBP16.91■□□□□ 0.3
RAB5C-206ENST00000550406 NBPF15Q8N660 670 aa16.91■□□□□ 0.3
RAB5C-206ENST00000550406 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
RAB5C-206ENST00000550406 CCDC87Q9NVE4 849 aa16.91■□□□□ 0.3
RAB5C-206ENST00000550406 ZBTB1Q9Y2K1 713 aa16.91■□□□□ 0.3
RAB5C-206ENST00000550406 VAMP4O75379 141 aa16.9■□□□□ 0.3
RAB5C-206ENST00000550406 STARD3NLO95772 234 aa16.9■□□□□ 0.3
RAB5C-206ENST00000550406 HOXB7P09629 217 aa16.9■□□□□ 0.3
RAB5C-206ENST00000550406 PIP4K2AP48426 406 aaPredicted RBP16.9■□□□□ 0.3
RAB5C-206ENST00000550406 STK32BQ9NY57 414 aa16.9■□□□□ 0.3
RAB5C-206ENST00000550406 C4AP0C0L4 1744 aa16.9■□□□□ 0.3
RAB5C-206ENST00000550406 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
RAB5C-206ENST00000550406 EIF2S2P20042 333 aaKnown RBP16.89■□□□□ 0.29
RAB5C-206ENST00000550406 PDIA6Q15084 440 aa16.89■□□□□ 0.29
RAB5C-206ENST00000550406 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
RAB5C-206ENST00000550406 CASZ1Q86V15 1759 aa16.88■□□□□ 0.29
RAB5C-206ENST00000550406 GNPATO15228 680 aa16.88■□□□□ 0.29
RAB5C-206ENST00000550406 CANXP27824 592 aaKnown RBP16.88■□□□□ 0.29
RAB5C-206ENST00000550406 TWISTNBQ3B726 338 aaPredicted RBP16.88■□□□□ 0.29
RAB5C-206ENST00000550406 AK7Q96M32 723 aa16.88■□□□□ 0.29
RAB5C-206ENST00000550406 PDGFDQ9GZP0 370 aaPredicted RBP16.88■□□□□ 0.29
RAB5C-206ENST00000550406 SOS1Q07889 1333 aaPredicted RBP16.88■□□□□ 0.29
RAB5C-206ENST00000550406 PNPLA7Q6ZV29 1317 aa16.88■□□□□ 0.29
RAB5C-206ENST00000550406 CACNA1FO60840 1977 aa16.88■□□□□ 0.29
RAB5C-206ENST00000550406 HMGB2P26583 209 aaKnown RBP16.87■□□□□ 0.29
RAB5C-206ENST00000550406 EIF5P55010 431 aaKnown RBP16.87■□□□□ 0.29
RAB5C-206ENST00000550406 PROSER3Q2NL68 480 aa16.87■□□□□ 0.29
RAB5C-206ENST00000550406 LRP10Q7Z4F1 713 aa16.87■□□□□ 0.29
RAB5C-206ENST00000550406 TFCP2L1Q9NZI6 479 aa16.87■□□□□ 0.29
RAB5C-206ENST00000550406 ANXA1P04083 346 aa16.86■□□□□ 0.29
RAB5C-206ENST00000550406 R3HDM1Q15032 1099 aaKnown RBP16.86■□□□□ 0.29
RAB5C-206ENST00000550406 HDGFL1Q5TGJ6 251 aa16.86■□□□□ 0.29
RAB5C-206ENST00000550406 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
RAB5C-206ENST00000550406 PSDA5PKW4 1024 aaPredicted RBP16.85■□□□□ 0.29
RAB5C-206ENST00000550406 RTCBQ9Y3I0 505 aaKnown RBP16.85■□□□□ 0.29
RAB5C-206ENST00000550406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
RAB5C-206ENST00000550406 TCERG1O14776 1098 aaKnown RBP16.84■□□□□ 0.29
RAB5C-206ENST00000550406 SSFA2P28290 1259 aa16.84■□□□□ 0.29
RAB5C-206ENST00000550406 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
RAB5C-206ENST00000550406 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
RAB5C-206ENST00000550406 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
RAB5C-206ENST00000550406 ERBB4Q15303 1308 aa16.84■□□□□ 0.29
RAB5C-206ENST00000550406 PHF14O94880 888 aa16.83■□□□□ 0.28
RAB5C-206ENST00000550406 COL15A1P39059 1388 aa16.83■□□□□ 0.28
RAB5C-206ENST00000550406 TRAPPC3LQ5T215 181 aa16.83■□□□□ 0.28
RAB5C-206ENST00000550406 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
RAB5C-206ENST00000550406 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
RAB5C-206ENST00000550406 MYL6BP14649 208 aa16.82■□□□□ 0.28
RAB5C-206ENST00000550406 NUP98P52948 1817 aa16.82■□□□□ 0.28
RAB5C-206ENST00000550406 COL24A1Q17RW2 1714 aa16.82■□□□□ 0.28
RAB5C-206ENST00000550406 CCDC30Q5VVM6 783 aa16.81■□□□□ 0.28
RAB5C-206ENST00000550406 ADRA2BP18089 450 aa16.8■□□□□ 0.28
RAB5C-206ENST00000550406 TTLL7Q6ZT98 887 aa16.8■□□□□ 0.28
RAB5C-206ENST00000550406 G2E3Q7L622 706 aa16.8■□□□□ 0.28
RAB5C-206ENST00000550406 DBF4Q9UBU7 674 aaPredicted RBP16.8■□□□□ 0.28
RAB5C-206ENST00000550406 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
RAB5C-206ENST00000550406 SCN7AQ01118 1682 aa16.79■□□□□ 0.28
RAB5C-206ENST00000550406 FLAD1Q8NFF5 587 aa16.79■□□□□ 0.28
RAB5C-206ENST00000550406 PHAXQ9H814 394 aaKnown RBP16.79■□□□□ 0.28
RAB5C-206ENST00000550406 BCL2L12Q9HB09 334 aa16.79■□□□□ 0.28
RAB5C-206ENST00000550406 NARFQ9UHQ1 456 aa16.79■□□□□ 0.28
RAB5C-206ENST00000550406 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
RAB5C-206ENST00000550406 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
RAB5C-206ENST00000550406 CT47B1P0C2W7 299 aaPredicted RBP16.78■□□□□ 0.28
RAB5C-206ENST00000550406 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
RAB5C-206ENST00000550406 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
RAB5C-206ENST00000550406 SSH1Q8WYL5 1049 aa16.78■□□□□ 0.28
RAB5C-206ENST00000550406 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
RAB5C-206ENST00000550406 A0A087WZG4 1122 aa16.77■□□□□ 0.28
RAB5C-206ENST00000550406 CAMTA2O94983 1202 aa16.77■□□□□ 0.28
RAB5C-206ENST00000550406 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
RAB5C-206ENST00000550406 RFC4P35249 363 aa16.77■□□□□ 0.28
RAB5C-206ENST00000550406 MRPL50Q8N5N7 158 aaKnown RBP16.77■□□□□ 0.28
RAB5C-206ENST00000550406 HYPKQ9NX55 129 aa16.77■□□□□ 0.28
RAB5C-206ENST00000550406 ARFGEF2Q9Y6D5 1785 aa16.77■□□□□ 0.27
RAB5C-206ENST00000550406 MSH5O43196 834 aa16.76■□□□□ 0.27
RAB5C-206ENST00000550406 GYS1P13807 737 aa16.76■□□□□ 0.27
RAB5C-206ENST00000550406 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
RAB5C-206ENST00000550406 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
RAB5C-206ENST00000550406 DZIP3Q86Y13 1208 aaKnown RBP16.76■□□□□ 0.27
RAB5C-206ENST00000550406 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
RAB5C-206ENST00000550406 RARSP54136 660 aaKnown RBP16.75■□□□□ 0.27
RAB5C-206ENST00000550406 HLFQ16534 295 aa16.75■□□□□ 0.27
RAB5C-206ENST00000550406 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms