RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 VTI1AQ96AJ9 217 aa9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 ESF1Q9H501 851 aaKnown RBP9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 CCDC87Q9NVE4 849 aa9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 SERTAD1Q9UHV2 236 aa9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 CEP170Q5SW79 1584 aa9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 HSP90B1P14625 803 aaKnown RBP9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 PLCB3Q01970 1234 aa9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 COX20Q5RI15 118 aa9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 KCTD12Q96CX2 325 aaKnown RBP9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 FAM163AQ96GL9 167 aaPredicted RBP9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 PRKD2Q9BZL6 878 aa9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 KIF13AQ9H1H9 1805 aa9.35□□□□□ -0.91
TGFBR1-208ENST00000550253 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 LDHBP07195 334 aaKnown RBP9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 EHHADHQ08426 723 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 ALKBH2Q6NS38 261 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 UBXN4Q92575 508 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 DMRTB1Q96MA1 342 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 FAM129BQ96TA1 746 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 C2orf49Q9BVC5 232 aaPredicted RBP9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 TMPRSS4Q9NRS4 437 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 STIM2Q9P246 746 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 PARP2Q9UGN5 583 aa9.34□□□□□ -0.91
TGFBR1-208ENST00000550253 POTEMA6NI47 508 aa9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 PPP1R12BO60237 982 aaPredicted RBP9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 SKOR1P84550 965 aa9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 RAD51AP2Q09MP3 1159 aa9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 SF3A1Q15459 793 aaKnown RBP9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 C9orf131Q5VYM1 1079 aa9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 TMC1Q8TDI8 760 aa9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 GRIN2AQ12879 1464 aa9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 SHROOM2Q13796 1616 aa9.33□□□□□ -0.92
TGFBR1-208ENST00000550253 FGD1P98174 961 aa9.32□□□□□ -0.92
TGFBR1-208ENST00000550253 FAM161BQ96MY7 647 aa9.32□□□□□ -0.92
TGFBR1-208ENST00000550253 CYLDQ9NQC7 956 aa9.32□□□□□ -0.92
TGFBR1-208ENST00000550253 RNF19AQ9NV58 838 aa9.32□□□□□ -0.92
TGFBR1-208ENST00000550253 SCHIP1Q9P0W5 487 aaPredicted RBP9.32□□□□□ -0.92
TGFBR1-208ENST00000550253 GPR182O15218 404 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 MAPK8P45983 427 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 XPCQ01831 940 aaPredicted RBP9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 TRIM32Q13049 653 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 MTFR1Q15390 333 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 LHX8Q68G74 356 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 TMC4Q7Z404 712 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 METTL16Q86W50 562 aaKnown RBP9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 PIK3R5Q8WYR1 880 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 ALKBH8Q96BT7 664 aaKnown RBP9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 DUSP9Q99956 384 aaKnown RBP9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 NUP160Q12769 1436 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 WNT7BP56706 349 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 TBCELQ5QJ74 424 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 SLC9A9Q8IVB4 645 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 CDK15Q96Q40 435 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 QTRT2Q9H974 415 aaKnown RBP9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 LRFN2Q9ULH4 789 aa9.31□□□□□ -0.92
TGFBR1-208ENST00000550253 A6NJY4 79 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 PPEF1O14829 653 aaPredicted RBP9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 LILRA1O75019 489 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 GNRH1P01148 92 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 GRM5P41594 1212 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 DAB2P98082 770 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 AAMPQ13685 434 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 LCE2DQ5TA82 110 aaPredicted RBP9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 TMEM87AQ8NBN3 555 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 ZNF784Q8NCA9 323 aaPredicted RBP9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 WWC3Q9ULE0 1092 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 BIVM-ERCC5R4GMW8 1640 aa9.3□□□□□ -0.92
TGFBR1-208ENST00000550253 ZBTB39O15060 712 aa9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 SMTNP53814 917 aa9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 DHX9Q08211 1270 aaKnown RBP9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 PDE3BQ13370 1112 aa9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 FAM26DQ5JW98 314 aa9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 POTEAQ6S8J7 498 aa9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 TRIM52Q96A61 297 aa9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 MYO19Q96H55 970 aa9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 PPP1R1BQ9UD71 204 aaPredicted RBP9.29□□□□□ -0.92
TGFBR1-208ENST00000550253 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
TGFBR1-208ENST00000550253 SORBS3O60504 671 aa9.27□□□□□ -0.93
TGFBR1-208ENST00000550253 FSHRP23945 695 aa9.27□□□□□ -0.93
TGFBR1-208ENST00000550253 PSMA6P60900 246 aaKnown RBP9.27□□□□□ -0.93
TGFBR1-208ENST00000550253 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
TGFBR1-208ENST00000550253 NT5DC4Q86YG4 428 aa9.27□□□□□ -0.93
TGFBR1-208ENST00000550253 SETDB2Q96T68 719 aa9.27□□□□□ -0.93
TGFBR1-208ENST00000550253 MRS2Q9HD23 443 aa9.27□□□□□ -0.93
TGFBR1-208ENST00000550253 TOP2BQ02880 1626 aa9.27□□□□□ -0.93
TGFBR1-208ENST00000550253 PTPN5P54829 565 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 FANCCQ00597 558 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 ARID5BQ14865 1188 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 ESCO1Q5FWF5 840 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 ABTB2Q8N961 1025 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 ADD1P35611 737 aaKnown RBP9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 ITGAEP38570 1179 aa9.26□□□□□ -0.93
TGFBR1-208ENST00000550253 ENOX2Q16206 610 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms