RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 KSR2Q6VAB6 950 aa23.81■■□□□ 1.4
BRF1-215ENST00000549655 PLEKHM2Q8IWE5 1019 aa23.81■■□□□ 1.4
BRF1-215ENST00000549655 MAP3K2Q9Y2U5 619 aa23.81■■□□□ 1.4
BRF1-215ENST00000549655 PNMA6EA0A0J9YXQ4 647 aa23.8■■□□□ 1.4
BRF1-215ENST00000549655 FMNL2Q96PY5 1086 aa23.8■■□□□ 1.4
BRF1-215ENST00000549655 BCL11AQ9H165 835 aa23.8■■□□□ 1.4
BRF1-215ENST00000549655 BTG4Q9NY30 223 aa23.8■■□□□ 1.4
BRF1-215ENST00000549655 SNRPA1P09661 255 aaKnown RBP23.8■■□□□ 1.4
BRF1-215ENST00000549655 C16orf71Q8IYS4 520 aaPredicted RBP23.8■■□□□ 1.4
BRF1-215ENST00000549655 SMARCA5O60264 1052 aaPredicted RBP23.79■■□□□ 1.4
BRF1-215ENST00000549655 NKX1-1Q15270 411 aaPredicted RBP23.79■■□□□ 1.4
BRF1-215ENST00000549655 DDX54Q8TDD1 881 aaKnown RBP23.79■■□□□ 1.4
BRF1-215ENST00000549655 USP35Q9P2H5 1018 aa23.78■■□□□ 1.4
BRF1-215ENST00000549655 ERVV-2B6SEH9 535 aa23.78■■□□□ 1.4
BRF1-215ENST00000549655 TBC1D32Q96NH3 1257 aa23.78■■□□□ 1.4
BRF1-215ENST00000549655 DDX58O95786 925 aaKnown RBP23.77■■□□□ 1.4
BRF1-215ENST00000549655 NBPF7P0C2Y1 421 aaPredicted RBP23.77■■□□□ 1.4
BRF1-215ENST00000549655 AIMP1Q12904 312 aaKnown RBP23.76■■□□□ 1.39
BRF1-215ENST00000549655 EXOC6BQ9Y2D4 811 aa23.76■■□□□ 1.39
BRF1-215ENST00000549655 USP16Q9Y5T5 823 aa23.76■■□□□ 1.39
BRF1-215ENST00000549655 SHANK3Q9BYB0 1731 aa23.76■■□□□ 1.39
BRF1-215ENST00000549655 COL22A1Q8NFW1 1626 aaPredicted RBP23.76■■□□□ 1.39
BRF1-215ENST00000549655 COL14A1Q05707 1796 aaKnown RBP23.75■■□□□ 1.39
BRF1-215ENST00000549655 ALDH1L1O75891 902 aa23.75■■□□□ 1.39
BRF1-215ENST00000549655 MYL6BP14649 208 aa23.75■■□□□ 1.39
BRF1-215ENST00000549655 MFAP1P55081 439 aaKnown RBP23.75■■□□□ 1.39
BRF1-215ENST00000549655 OTUD7AQ8TE49 926 aaPredicted RBP23.75■■□□□ 1.39
BRF1-215ENST00000549655 GSPT1P15170 499 aaKnown RBP23.73■■□□□ 1.39
BRF1-215ENST00000549655 TTC22Q5TAA0 569 aa23.72■■□□□ 1.39
BRF1-215ENST00000549655 SSH3Q8TE77 659 aa23.72■■□□□ 1.39
BRF1-215ENST00000549655 DAXXQ9UER7 740 aaPredicted RBP23.72■■□□□ 1.39
BRF1-215ENST00000549655 PPP1R42Q7Z4L9 355 aa23.72■■□□□ 1.39
BRF1-215ENST00000549655 XAGE3Q8WTP9 111 aa23.72■■□□□ 1.39
BRF1-215ENST00000549655 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
BRF1-215ENST00000549655 LINS1Q8NG48 757 aa23.71■■□□□ 1.39
BRF1-215ENST00000549655 LRRCC1Q9C099 1032 aa23.71■■□□□ 1.39
BRF1-215ENST00000549655 C9orf78Q9NZ63 289 aaPredicted RBP23.71■■□□□ 1.39
BRF1-215ENST00000549655 IBTKQ9P2D0 1353 aaPredicted RBP23.71■■□□□ 1.39
BRF1-215ENST00000549655 GLI3P10071 1580 aa23.71■■□□□ 1.39
BRF1-215ENST00000549655 SLC4A3P48751 1232 aa23.71■■□□□ 1.39
BRF1-215ENST00000549655 COL16A1Q07092 1604 aaPredicted RBP23.71■■□□□ 1.39
BRF1-215ENST00000549655 POLA2Q14181 598 aa23.71■■□□□ 1.39
BRF1-215ENST00000549655 COPS6Q7L5N1 327 aa23.71■■□□□ 1.39
BRF1-215ENST00000549655 RIC3Q7Z5B4 369 aa23.71■■□□□ 1.39
BRF1-215ENST00000549655 LRP10Q7Z4F1 713 aa23.7■■□□□ 1.38
BRF1-215ENST00000549655 C22orf23Q9BZE7 217 aa23.7■■□□□ 1.38
BRF1-215ENST00000549655 PIP4K2AP48426 406 aaPredicted RBP23.69■■□□□ 1.38
BRF1-215ENST00000549655 TBC1D9Q6ZT07 1266 aa23.69■■□□□ 1.38
BRF1-215ENST00000549655 SRGAP3O43295 1099 aa23.68■■□□□ 1.38
BRF1-215ENST00000549655 LAMB4A4D0S4 1761 aa23.68■■□□□ 1.38
BRF1-215ENST00000549655 UBR2Q8IWV8 1755 aa23.67■■□□□ 1.38
BRF1-215ENST00000549655 PHLPP1O60346 1717 aa23.67■■□□□ 1.38
BRF1-215ENST00000549655 CDC45O75419 566 aa23.67■■□□□ 1.38
BRF1-215ENST00000549655 HDAC5Q9UQL6 1122 aa23.67■■□□□ 1.38
BRF1-215ENST00000549655 NEXNQ0ZGT2 675 aa23.66■■□□□ 1.38
BRF1-215ENST00000549655 ANKRD13DQ6ZTN6 518 aa23.66■■□□□ 1.38
BRF1-215ENST00000549655 PAPPAQ13219 1627 aa23.66■■□□□ 1.38
BRF1-215ENST00000549655 KCPQ6ZWJ8 1503 aa23.66■■□□□ 1.38
BRF1-215ENST00000549655 GRM8O00222 908 aa23.65■■□□□ 1.38
BRF1-215ENST00000549655 IGKV5-2P06315 115 aa23.65■■□□□ 1.38
BRF1-215ENST00000549655 OSBPL3Q9H4L5 887 aa23.65■■□□□ 1.38
BRF1-215ENST00000549655 DISP2A7MBM2 1401 aa23.65■■□□□ 1.38
BRF1-215ENST00000549655 TOGARAM1Q9Y4F4 1720 aa23.65■■□□□ 1.38
BRF1-215ENST00000549655 SURF6O75683 361 aaKnown RBP23.65■■□□□ 1.38
BRF1-215ENST00000549655 PDE1AP54750 535 aa23.65■■□□□ 1.38
BRF1-215ENST00000549655 METTL22Q9BUU2 404 aaPredicted RBP23.65■■□□□ 1.38
BRF1-215ENST00000549655 UTYO14607 1347 aa23.64■■□□□ 1.38
BRF1-215ENST00000549655 PTCD1O75127 700 aaKnown RBP23.64■■□□□ 1.38
BRF1-215ENST00000549655 RAB11FIP3O75154 756 aa23.64■■□□□ 1.38
BRF1-215ENST00000549655 TMOD3Q9NYL9 352 aa23.64■■□□□ 1.38
BRF1-215ENST00000549655 MTX1Q13505 466 aa23.63■■□□□ 1.37
BRF1-215ENST00000549655 ERBB4Q15303 1308 aa23.63■■□□□ 1.37
BRF1-215ENST00000549655 TNS2Q63HR2 1409 aa23.63■■□□□ 1.37
BRF1-215ENST00000549655 ADAMTS2O95450 1211 aa23.63■■□□□ 1.37
BRF1-215ENST00000549655 MYD88Q99836 296 aa23.63■■□□□ 1.37
BRF1-215ENST00000549655 SALL3Q9BXA9 1300 aa23.62■■□□□ 1.37
BRF1-215ENST00000549655 NEURL1BA8MQ27 555 aa23.62■■□□□ 1.37
BRF1-215ENST00000549655 TOM1O60784 492 aa23.62■■□□□ 1.37
BRF1-215ENST00000549655 SDSP20132 328 aa23.62■■□□□ 1.37
BRF1-215ENST00000549655 NBPF26B4DH59 902 aa23.61■■□□□ 1.37
BRF1-215ENST00000549655 PIP4K2BP78356 416 aa23.61■■□□□ 1.37
BRF1-215ENST00000549655 BECN1Q14457 450 aa23.61■■□□□ 1.37
BRF1-215ENST00000549655 NBPF14Q5TI25 921 aa23.61■■□□□ 1.37
BRF1-215ENST00000549655 NBPF10Q6P3W6 841 aaKnown RBP23.61■■□□□ 1.37
BRF1-215ENST00000549655 NBPF15Q8N660 670 aa23.61■■□□□ 1.37
BRF1-215ENST00000549655 MX1P20591 662 aa23.6■■□□□ 1.37
BRF1-215ENST00000549655 SUCLG2Q96I99 432 aa23.6■■□□□ 1.37
BRF1-215ENST00000549655 PLCH1Q4KWH8 1693 aa23.6■■□□□ 1.37
BRF1-215ENST00000549655 RBM25P49756 843 aaKnown RBP23.6■■□□□ 1.37
BRF1-215ENST00000549655 GCKRQ14397 625 aa23.6■■□□□ 1.37
BRF1-215ENST00000549655 IL1RAPL2Q9NP60 686 aa23.6■■□□□ 1.37
BRF1-215ENST00000549655 HSP90AB4PQ58FF6 505 aa23.59■■□□□ 1.37
BRF1-215ENST00000549655 PLBD2Q8NHP8 589 aa23.59■■□□□ 1.37
BRF1-215ENST00000549655 RHPN1Q8TCX5 695 aa23.59■■□□□ 1.37
BRF1-215ENST00000549655 PIGBQ92521 554 aa23.59■■□□□ 1.37
BRF1-215ENST00000549655 KAZALD1Q96I82 304 aa23.59■■□□□ 1.37
BRF1-215ENST00000549655 TSHZ3Q63HK5 1081 aa23.58■■□□□ 1.37
BRF1-215ENST00000549655 KIF1BPQ96EK5 621 aa23.58■■□□□ 1.37
BRF1-215ENST00000549655 EXOC5O00471 708 aa23.58■■□□□ 1.36
BRF1-215ENST00000549655 A1BGP04217 495 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms