RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 DNAJC10Q8IXB1 793 aa11.72□□□□□ -0.53
SMARCC2-205ENST00000548130 MIS18AQ9NYP9 233 aa11.72□□□□□ -0.53
SMARCC2-205ENST00000548130 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.53
SMARCC2-205ENST00000548130 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
SMARCC2-205ENST00000548130 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
SMARCC2-205ENST00000548130 PNISRQ8TF01 805 aaKnown RBP11.71□□□□□ -0.53
SMARCC2-205ENST00000548130 ZNF496Q96IT1 587 aaPredicted RBP11.71□□□□□ -0.53
SMARCC2-205ENST00000548130 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
SMARCC2-205ENST00000548130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.7□□□□□ -0.54
SMARCC2-205ENST00000548130 APAF1O14727 1248 aa11.7□□□□□ -0.54
SMARCC2-205ENST00000548130 TAF7Q15545 349 aaPredicted RBP11.7□□□□□ -0.54
SMARCC2-205ENST00000548130 SPON1Q9HCB6 807 aa11.7□□□□□ -0.54
SMARCC2-205ENST00000548130 CRKLP46109 303 aaKnown RBP11.69□□□□□ -0.54
SMARCC2-205ENST00000548130 LMOD3Q0VAK6 560 aa11.69□□□□□ -0.54
SMARCC2-205ENST00000548130 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
SMARCC2-205ENST00000548130 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
SMARCC2-205ENST00000548130 C5P01031 1676 aa11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 CYP19A1P11511 503 aaPredicted RBP11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 MSL1Q68DK7 614 aa11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 VSIG10Q8N0Z9 540 aa11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 FLAD1Q8NFF5 587 aa11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 TRIM35Q9UPQ4 493 aa11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 RTCBQ9Y3I0 505 aaKnown RBP11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 C4BP0C0L5 1744 aa11.68□□□□□ -0.54
SMARCC2-205ENST00000548130 HEG1Q9ULI3 1381 aa11.67□□□□□ -0.54
SMARCC2-205ENST00000548130 RPS6KA4O75676 772 aa11.67□□□□□ -0.54
SMARCC2-205ENST00000548130 SSFA2P28290 1259 aa11.67□□□□□ -0.54
SMARCC2-205ENST00000548130 PTGER2P43116 358 aa11.67□□□□□ -0.54
SMARCC2-205ENST00000548130 INTS5Q6P9B9 1019 aaKnown RBP11.67□□□□□ -0.54
SMARCC2-205ENST00000548130 CASZ1Q86V15 1759 aa11.67□□□□□ -0.54
SMARCC2-205ENST00000548130 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 PRAMEF22A3QJZ6 481 aa11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 CLCN6P51797 869 aa11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 SLC16A10Q8TF71 515 aa11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 CCDC87Q9NVE4 849 aa11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 PPP1R1BQ9UD71 204 aaPredicted RBP11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 ZBTB1Q9Y2K1 713 aa11.66□□□□□ -0.54
SMARCC2-205ENST00000548130 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.54
SMARCC2-205ENST00000548130 STARD3NLO95772 234 aa11.65□□□□□ -0.54
SMARCC2-205ENST00000548130 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
SMARCC2-205ENST00000548130 ARHGEF1Q92888 912 aaKnown RBP11.65□□□□□ -0.54
SMARCC2-205ENST00000548130 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
SMARCC2-205ENST00000548130 TSPYL4Q9UJ04 414 aa11.65□□□□□ -0.54
SMARCC2-205ENST00000548130 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
SMARCC2-205ENST00000548130 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
SMARCC2-205ENST00000548130 TUBGCP6Q96RT7 1819 aa11.65□□□□□ -0.55
SMARCC2-205ENST00000548130 A1BGP04217 495 aa11.64□□□□□ -0.55
SMARCC2-205ENST00000548130 SNRPA1P09661 255 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-205ENST00000548130 EIF4A1P60842 406 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-205ENST00000548130 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
SMARCC2-205ENST00000548130 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
SMARCC2-205ENST00000548130 DLG5Q8TDM6 1919 aa11.64□□□□□ -0.55
SMARCC2-205ENST00000548130 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
SMARCC2-205ENST00000548130 TJP1Q07157 1748 aa11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 SOS1Q07889 1333 aaPredicted RBP11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 GABBR2O75899 941 aa11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 POLD1P28340 1107 aa11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 RFC4P35249 363 aa11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 MNX1P50219 401 aaPredicted RBP11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 SRP68Q9UHB9 627 aaKnown RBP11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 SALL2Q9Y467 1007 aaPredicted RBP11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 LRP5O75197 1615 aa11.63□□□□□ -0.55
SMARCC2-205ENST00000548130 ZNF831Q5JPB2 1677 aa11.62□□□□□ -0.55
SMARCC2-205ENST00000548130 MYH14Q7Z406 1995 aaKnown RBP11.62□□□□□ -0.55
SMARCC2-205ENST00000548130 ARXQ96QS3 562 aa11.62□□□□□ -0.55
SMARCC2-205ENST00000548130 ZNF330Q9Y3S2 320 aaPredicted RBP11.62□□□□□ -0.55
SMARCC2-205ENST00000548130 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
SMARCC2-205ENST00000548130 UBR3Q6ZT12 1888 aa11.61□□□□□ -0.55
SMARCC2-205ENST00000548130 COL5A3P25940 1745 aaPredicted RBP11.61□□□□□ -0.55
SMARCC2-205ENST00000548130 QSER1Q2KHR3 1735 aa11.61□□□□□ -0.55
SMARCC2-205ENST00000548130 CHL1O00533 1208 aa11.61□□□□□ -0.55
SMARCC2-205ENST00000548130 GIGYF1O75420 1035 aaPredicted RBP11.61□□□□□ -0.55
SMARCC2-205ENST00000548130 MIER1Q8N108 512 aa11.61□□□□□ -0.55
SMARCC2-205ENST00000548130 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
SMARCC2-205ENST00000548130 COL15A1P39059 1388 aa11.6□□□□□ -0.55
SMARCC2-205ENST00000548130 GYS1P13807 737 aa11.6□□□□□ -0.55
SMARCC2-205ENST00000548130 EIF5P55010 431 aaKnown RBP11.6□□□□□ -0.55
SMARCC2-205ENST00000548130 KRT24Q2M2I5 525 aa11.6□□□□□ -0.55
SMARCC2-205ENST00000548130 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
SMARCC2-205ENST00000548130 BABAM1Q9NWV8 329 aa11.6□□□□□ -0.55
SMARCC2-205ENST00000548130 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
SMARCC2-205ENST00000548130 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
SMARCC2-205ENST00000548130 NBPF26B4DH59 902 aa11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 CCER2I3L3R5 266 aa11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 ZPR1O75312 459 aa11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 MMP10P09238 476 aa11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 NBPF10Q6P3W6 841 aaKnown RBP11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 WWC1Q8IX03 1113 aa11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 NBPF15Q8N660 670 aa11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 FHDC1Q9C0D6 1143 aaPredicted RBP11.59□□□□□ -0.55
SMARCC2-205ENST00000548130 A0A087WZG4 1122 aa11.58□□□□□ -0.56
SMARCC2-205ENST00000548130 ZNF853P0CG23 659 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms