RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RFC4P35249 363 aa15.58■□□□□ 0.08
RAB5C-204ENST00000547517 TAF7Q15545 349 aaPredicted RBP15.58■□□□□ 0.08
RAB5C-204ENST00000547517 NEUROD2Q15784 382 aa15.58■□□□□ 0.08
RAB5C-204ENST00000547517 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.08
RAB5C-204ENST00000547517 STARD3NLO95772 234 aa15.57■□□□□ 0.08
RAB5C-204ENST00000547517 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
RAB5C-204ENST00000547517 SOS1Q07889 1333 aaPredicted RBP15.57■□□□□ 0.08
RAB5C-204ENST00000547517 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
RAB5C-204ENST00000547517 PNISRQ8TF01 805 aaKnown RBP15.56■□□□□ 0.08
RAB5C-204ENST00000547517 SYT17Q9BSW7 474 aa15.56■□□□□ 0.08
RAB5C-204ENST00000547517 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
RAB5C-204ENST00000547517 COL15A1P39059 1388 aa15.56■□□□□ 0.08
RAB5C-204ENST00000547517 USP42Q9H9J4 1324 aaKnown RBP15.55■□□□□ 0.08
RAB5C-204ENST00000547517 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
RAB5C-204ENST00000547517 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
RAB5C-204ENST00000547517 SRP68Q9UHB9 627 aaKnown RBP15.55■□□□□ 0.08
RAB5C-204ENST00000547517 LAMB4A4D0S4 1761 aa15.54■□□□□ 0.08
RAB5C-204ENST00000547517 GYS1P13807 737 aa15.54■□□□□ 0.08
RAB5C-204ENST00000547517 ZNF330Q9Y3S2 320 aaPredicted RBP15.54■□□□□ 0.08
RAB5C-204ENST00000547517 MMP10P09238 476 aa15.53■□□□□ 0.08
RAB5C-204ENST00000547517 SNRPA1P09661 255 aaKnown RBP15.53■□□□□ 0.08
RAB5C-204ENST00000547517 TSPYL4Q9UJ04 414 aa15.53■□□□□ 0.08
RAB5C-204ENST00000547517 A1BGP04217 495 aa15.52■□□□□ 0.08
RAB5C-204ENST00000547517 NLGN1Q8N2Q7 840 aa15.52■□□□□ 0.08
RAB5C-204ENST00000547517 TRIM35Q9UPQ4 493 aa15.52■□□□□ 0.08
RAB5C-204ENST00000547517 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
RAB5C-204ENST00000547517 SCN7AQ01118 1682 aa15.51■□□□□ 0.07
RAB5C-204ENST00000547517 APAF1O14727 1248 aa15.51■□□□□ 0.07
RAB5C-204ENST00000547517 ZPR1O75312 459 aa15.51■□□□□ 0.07
RAB5C-204ENST00000547517 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
RAB5C-204ENST00000547517 FKBP8Q14318 412 aa15.51■□□□□ 0.07
RAB5C-204ENST00000547517 USPL1Q5W0Q7 1092 aa15.51■□□□□ 0.07
RAB5C-204ENST00000547517 NLGN2Q8NFZ4 835 aa15.51■□□□□ 0.07
RAB5C-204ENST00000547517 EIF5P55010 431 aaKnown RBP15.5■□□□□ 0.07
RAB5C-204ENST00000547517 EIF4A1P60842 406 aaKnown RBP15.5■□□□□ 0.07
RAB5C-204ENST00000547517 IL6STP40189 918 aaPredicted RBP15.49■□□□□ 0.07
RAB5C-204ENST00000547517 NARFQ9UHQ1 456 aa15.49■□□□□ 0.07
RAB5C-204ENST00000547517 LAS1LQ9Y4W2 734 aaKnown RBP15.49■□□□□ 0.07
RAB5C-204ENST00000547517 A0A087WZG4 1122 aa15.48■□□□□ 0.07
RAB5C-204ENST00000547517 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
RAB5C-204ENST00000547517 GIGYF1O75420 1035 aaPredicted RBP15.48■□□□□ 0.07
RAB5C-204ENST00000547517 NPM2Q86SE8 214 aaKnown RBP15.48■□□□□ 0.07
RAB5C-204ENST00000547517 PARP3Q9Y6F1 533 aa15.48■□□□□ 0.07
RAB5C-204ENST00000547517 SENP3-EIF4A1A0A087X0R7 540 aa15.47■□□□□ 0.07
RAB5C-204ENST00000547517 C10orf71Q711Q0 1435 aa15.47■□□□□ 0.07
RAB5C-204ENST00000547517 CD2APQ9Y5K6 639 aa15.47■□□□□ 0.07
RAB5C-204ENST00000547517 BCORQ6W2J9 1755 aa15.47■□□□□ 0.07
RAB5C-204ENST00000547517 DDR1Q08345 913 aa15.46■□□□□ 0.07
RAB5C-204ENST00000547517 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
RAB5C-204ENST00000547517 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
RAB5C-204ENST00000547517 BABAM1Q9NWV8 329 aa15.46■□□□□ 0.07
RAB5C-204ENST00000547517 TBC1D2BQ9UPU7 963 aa15.46■□□□□ 0.07
RAB5C-204ENST00000547517 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
RAB5C-204ENST00000547517 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
RAB5C-204ENST00000547517 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
RAB5C-204ENST00000547517 NBPF15Q8N660 670 aa15.45■□□□□ 0.06
RAB5C-204ENST00000547517 KIF13BQ9NQT8 1826 aa15.45■□□□□ 0.06
RAB5C-204ENST00000547517 POLRMTO00411 1230 aaKnown RBP15.44■□□□□ 0.06
RAB5C-204ENST00000547517 CHL1O00533 1208 aa15.44■□□□□ 0.06
RAB5C-204ENST00000547517 NFIXQ14938 502 aa15.44■□□□□ 0.06
RAB5C-204ENST00000547517 BICDL1Q6ZP65 573 aa15.44■□□□□ 0.06
RAB5C-204ENST00000547517 CAMTA2O94983 1202 aa15.43■□□□□ 0.06
RAB5C-204ENST00000547517 GPR162Q16538 588 aa15.43■□□□□ 0.06
RAB5C-204ENST00000547517 KRT24Q2M2I5 525 aa15.43■□□□□ 0.06
RAB5C-204ENST00000547517 FAM9BQ8IZU0 186 aa15.43■□□□□ 0.06
RAB5C-204ENST00000547517 PXDNLA1KZ92 1463 aa15.43■□□□□ 0.06
RAB5C-204ENST00000547517 GOLGB1Q14789 3259 aaKnown RBP15.43■□□□□ 0.06
RAB5C-204ENST00000547517 KIAA1551Q9HCM1 1747 aa15.43■□□□□ 0.06
RAB5C-204ENST00000547517 TM4SF1P30408 202 aa15.42■□□□□ 0.06
RAB5C-204ENST00000547517 CALD1Q05682 793 aaKnown RBP15.42■□□□□ 0.06
RAB5C-204ENST00000547517 TBC1D9BQ66K14 1250 aa15.42■□□□□ 0.06
RAB5C-204ENST00000547517 CFAP44Q96MT7 982 aa15.42■□□□□ 0.06
RAB5C-204ENST00000547517 WWC3Q9ULE0 1092 aa15.42■□□□□ 0.06
RAB5C-204ENST00000547517 AFDNP55196 1824 aaKnown RBP15.41■□□□□ 0.06
RAB5C-204ENST00000547517 MYL6BP14649 208 aa15.41■□□□□ 0.06
RAB5C-204ENST00000547517 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
RAB5C-204ENST00000547517 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
RAB5C-204ENST00000547517 MBIPQ9NS73 344 aa15.41■□□□□ 0.06
RAB5C-204ENST00000547517 IFT57Q9NWB7 429 aa15.41■□□□□ 0.06
RAB5C-204ENST00000547517 N4BP2Q86UW6 1770 aaPredicted RBP15.41■□□□□ 0.06
RAB5C-204ENST00000547517 UTRNP46939 3433 aa15.4■□□□□ 0.06
RAB5C-204ENST00000547517 NRXN2Q9P2S2 1712 aa15.4■□□□□ 0.06
RAB5C-204ENST00000547517 YY1P25490 414 aa15.4■□□□□ 0.06
RAB5C-204ENST00000547517 NECTIN2Q92692 538 aa15.4■□□□□ 0.06
RAB5C-204ENST00000547517 ERBB4Q15303 1308 aa15.4■□□□□ 0.06
RAB5C-204ENST00000547517 CARMIL3Q8ND23 1372 aa15.39■□□□□ 0.05
RAB5C-204ENST00000547517 SERPINB2P05120 415 aa15.39■□□□□ 0.05
RAB5C-204ENST00000547517 YBX3P16989 372 aaKnown RBP eCLIP15.39■□□□□ 0.057e-8■■■□□ 18
RAB5C-204ENST00000547517 GNAI1P63096 354 aa15.39■□□□□ 0.05
RAB5C-204ENST00000547517 ZNF652Q9Y2D9 606 aa15.39■□□□□ 0.05
RAB5C-204ENST00000547517 ZNF853P0CG23 659 aa15.38■□□□□ 0.05
RAB5C-204ENST00000547517 CCDC27Q2M243 656 aa15.38■□□□□ 0.05
RAB5C-204ENST00000547517 KIF6Q6ZMV9 814 aa15.38■□□□□ 0.05
RAB5C-204ENST00000547517 WWC1Q8IX03 1113 aa15.38■□□□□ 0.05
RAB5C-204ENST00000547517 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
RAB5C-204ENST00000547517 A0A0G2JLW4 131 aa15.37■□□□□ 0.05
RAB5C-204ENST00000547517 ANXA1P04083 346 aa15.37■□□□□ 0.05
RAB5C-204ENST00000547517 DPEP1P16444 411 aa15.37■□□□□ 0.05
RAB5C-204ENST00000547517 TGFB2P61812 414 aa15.37■□□□□ 0.05
RAB5C-204ENST00000547517 PROSER3Q2NL68 480 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms