RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 SENP2Q9HC62 589 aa10.39□□□□□ -0.75
COPA-206ENST00000545266 DNMT3LQ9UJW3 386 aa10.39□□□□□ -0.75
COPA-206ENST00000545266 GNEQ9Y223 722 aaKnown RBP10.39□□□□□ -0.75
COPA-206ENST00000545266 PPP1R12BO60237 982 aaPredicted RBP10.38□□□□□ -0.75
COPA-206ENST00000545266 NOS2P35228 1153 aa10.38□□□□□ -0.75
COPA-206ENST00000545266 GNASQ5JWF2 1037 aa10.38□□□□□ -0.75
COPA-206ENST00000545266 TBCELQ5QJ74 424 aa10.38□□□□□ -0.75
COPA-206ENST00000545266 Q6ZNB5 142 aa10.38□□□□□ -0.75
COPA-206ENST00000545266 TXNDC2Q86VQ3 553 aa10.38□□□□□ -0.75
COPA-206ENST00000545266 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
COPA-206ENST00000545266 SERTM1A2A2V5 107 aa10.36□□□□□ -0.75
COPA-206ENST00000545266 PATL2C9JE40 543 aaKnown RBP10.36□□□□□ -0.75
COPA-206ENST00000545266 PTCD1O75127 700 aaKnown RBP10.36□□□□□ -0.75
COPA-206ENST00000545266 GTF2E1P29083 439 aaPredicted RBP10.36□□□□□ -0.75
COPA-206ENST00000545266 POU4F2Q12837 409 aa10.36□□□□□ -0.75
COPA-206ENST00000545266 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.36□□□□□ -0.75
COPA-206ENST00000545266 C7orf43Q8WVR3 580 aa10.36□□□□□ -0.75
COPA-206ENST00000545266 L3MBTL2Q969R5 705 aa10.36□□□□□ -0.75
COPA-206ENST00000545266 ARID4AP29374 1257 aaPredicted RBP10.35□□□□□ -0.75
COPA-206ENST00000545266 C1orf53Q5VUE5 145 aa10.35□□□□□ -0.75
COPA-206ENST00000545266 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
COPA-206ENST00000545266 CABP1Q9NZU7 370 aa10.35□□□□□ -0.75
COPA-206ENST00000545266 FIGNL2A6NMB9 653 aa10.34□□□□□ -0.75
COPA-206ENST00000545266 GMPR2Q9P2T1 348 aaKnown RBP10.34□□□□□ -0.75
COPA-206ENST00000545266 SH3PXD2AQ5TCZ1 1133 aa10.33□□□□□ -0.76
COPA-206ENST00000545266 ZDHHC3Q9NYG2 299 aa10.33□□□□□ -0.76
COPA-206ENST00000545266 SENP3-EIF4A1A0A087X0R7 540 aa10.32□□□□□ -0.76
COPA-206ENST00000545266 CAPN12Q6ZSI9 719 aa10.32□□□□□ -0.76
COPA-206ENST00000545266 MYO19Q96H55 970 aa10.32□□□□□ -0.76
COPA-206ENST00000545266 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.32□□□□□ -0.761e-13■■■■■ 30.3
COPA-206ENST00000545266 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
COPA-206ENST00000545266 MAN1A2O60476 641 aa10.31□□□□□ -0.76
COPA-206ENST00000545266 SCNN1AP37088 669 aa10.31□□□□□ -0.76
COPA-206ENST00000545266 PLA2G4AP47712 749 aa10.31□□□□□ -0.76
COPA-206ENST00000545266 CHMP7Q8WUX9 453 aaPredicted RBP10.31□□□□□ -0.76
COPA-206ENST00000545266 DYRK1BQ9Y463 629 aa10.31□□□□□ -0.76
COPA-206ENST00000545266 GPC6Q9Y625 555 aaPredicted RBP10.31□□□□□ -0.76
COPA-206ENST00000545266 PARP3Q9Y6F1 533 aa10.31□□□□□ -0.76
COPA-206ENST00000545266 A0A1B0GTH6 734 aa10.3□□□□□ -0.76
COPA-206ENST00000545266 QTRT2Q9H974 415 aaKnown RBP10.3□□□□□ -0.76
COPA-206ENST00000545266 SNRPBP14678 240 aaKnown RBP10.29□□□□□ -0.76
COPA-206ENST00000545266 RHOQP17081 205 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 ATP4AP20648 1035 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 TXLNAP40222 546 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 ALDH16A1Q8IZ83 802 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 CCER1Q8TC90 406 aaPredicted RBP10.29□□□□□ -0.76
COPA-206ENST00000545266 TIMMDC1Q9NPL8 285 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 SEPT3Q9UH03 358 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 EGFL7Q9UHF1 273 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 ZNF232Q9UNY5 417 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 MTMR7Q9Y216 660 aa10.29□□□□□ -0.76
COPA-206ENST00000545266 SLC35F4A4IF30 521 aa10.28□□□□□ -0.76
COPA-206ENST00000545266 PHKA2P46019 1235 aa10.28□□□□□ -0.76
COPA-206ENST00000545266 RTN1Q16799 776 aa10.28□□□□□ -0.76
COPA-206ENST00000545266 NBPF1Q3BBV0 1214 aa10.28□□□□□ -0.76
COPA-206ENST00000545266 PHACTR1Q9C0D0 580 aa10.28□□□□□ -0.76
COPA-206ENST00000545266 SOBPA7XYQ1 873 aa10.27□□□□□ -0.77
COPA-206ENST00000545266 MSX1P28360 303 aa10.27□□□□□ -0.77
COPA-206ENST00000545266 PTSQ03393 145 aa10.27□□□□□ -0.77
COPA-206ENST00000545266 AEBP1Q8IUX7 1158 aa10.27□□□□□ -0.77
COPA-206ENST00000545266 VTI1AQ96AJ9 217 aa10.27□□□□□ -0.77
COPA-206ENST00000545266 HCN4Q9Y3Q4 1203 aa10.27□□□□□ -0.77
COPA-206ENST00000545266 POTECB2RU33 542 aa10.26□□□□□ -0.77
COPA-206ENST00000545266 NPR3P17342 541 aa10.26□□□□□ -0.77
COPA-206ENST00000545266 COX20Q5RI15 118 aa10.26□□□□□ -0.77
COPA-206ENST00000545266 C16orf46Q6P387 395 aa10.26□□□□□ -0.77
COPA-206ENST00000545266 GTF3C2Q8WUA4 911 aaPredicted RBP10.26□□□□□ -0.77
COPA-206ENST00000545266 MKNK1Q9BUB5 465 aa10.26□□□□□ -0.77
COPA-206ENST00000545266 SAP130Q9H0E3 1048 aa10.26□□□□□ -0.77
COPA-206ENST00000545266 C11orf95C9JLR9 678 aaPredicted RBP10.25□□□□□ -0.77
COPA-206ENST00000545266 F11P03951 625 aa10.25□□□□□ -0.77
COPA-206ENST00000545266 HELQQ8TDG4 1101 aa10.25□□□□□ -0.77
COPA-206ENST00000545266 CRISPLD1Q9H336 500 aa10.25□□□□□ -0.77
COPA-206ENST00000545266 LRFN2Q9ULH4 789 aa10.25□□□□□ -0.77
COPA-206ENST00000545266 TNFRSF10BO14763 440 aa10.24□□□□□ -0.77
COPA-206ENST00000545266 TATP17735 454 aaPredicted RBP10.24□□□□□ -0.77
COPA-206ENST00000545266 DNMT3AQ9Y6K1 912 aaPredicted RBP10.24□□□□□ -0.77
COPA-206ENST00000545266 IVNS1ABPQ9Y6Y0 642 aa10.24□□□□□ -0.77
COPA-206ENST00000545266 SERPINB4P48594 390 aa10.23□□□□□ -0.77
COPA-206ENST00000545266 TRIM26Q12899 539 aaPredicted RBP10.23□□□□□ -0.77
COPA-206ENST00000545266 NAA30Q147X3 362 aaPredicted RBP10.23□□□□□ -0.77
COPA-206ENST00000545266 AIDAQ96BJ3 306 aa10.23□□□□□ -0.77
COPA-206ENST00000545266 ZIC5Q96T25 663 aa10.23□□□□□ -0.77
COPA-206ENST00000545266 SF3B2Q13435 895 aaKnown RBP10.22□□□□□ -0.77
COPA-206ENST00000545266 LBRQ14739 615 aaKnown RBP10.22□□□□□ -0.77
COPA-206ENST00000545266 ECM1Q16610 540 aa10.22□□□□□ -0.77
COPA-206ENST00000545266 CCDC155Q8N6L0 562 aa10.22□□□□□ -0.77
COPA-206ENST00000545266 ZBTB7CA1YPR0 619 aa10.21□□□□□ -0.77
COPA-206ENST00000545266 SOWAHDA6NJG2 315 aa10.21□□□□□ -0.77
COPA-206ENST00000545266 ICMTO60725 284 aa10.21□□□□□ -0.77
COPA-206ENST00000545266 FKBP4Q02790 459 aaKnown RBP eCLIP10.21□□□□□ -0.77
COPA-206ENST00000545266 C11orf91Q3C1V1 193 aa10.21□□□□□ -0.77
COPA-206ENST00000545266 NGLY1Q96IV0 654 aa10.21□□□□□ -0.77
COPA-206ENST00000545266 THBS1P07996 1170 aa10.2□□□□□ -0.78
COPA-206ENST00000545266 HIF1AQ16665 826 aa10.2□□□□□ -0.78
COPA-206ENST00000545266 IER5Q5VY09 327 aa10.2□□□□□ -0.78
COPA-206ENST00000545266 NLRP8Q86W28 1048 aa10.2□□□□□ -0.78
COPA-206ENST00000545266 RHPN1Q8TCX5 695 aa10.2□□□□□ -0.78
COPA-206ENST00000545266 KLRG1Q96E93 195 aa10.2□□□□□ -0.78
COPA-206ENST00000545266 GMCL1Q96IK5 515 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms