RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 CEP135Q66GS9 1140 aa21.74■■□□□ 1.07
CCT4-204ENST00000544079 ERO1AQ96HE7 468 aa21.74■■□□□ 1.07
CCT4-204ENST00000544079 POLKQ9UBT6 870 aa21.74■■□□□ 1.07
CCT4-204ENST00000544079 ZNF75DP51815 510 aa21.73■■□□□ 1.07
CCT4-204ENST00000544079 KMT5BQ4FZB7 885 aa21.73■■□□□ 1.07
CCT4-204ENST00000544079 LIMCH1Q9UPQ0 1083 aa21.73■■□□□ 1.07
CCT4-204ENST00000544079 SMC3Q9UQE7 1217 aa21.73■■□□□ 1.07
CCT4-204ENST00000544079 MRVI1Q9Y6F6 885 aa21.73■■□□□ 1.07
CCT4-204ENST00000544079 NPATQ14207 1427 aa21.73■■□□□ 1.07
CCT4-204ENST00000544079 TPD52L1Q16890 204 aaPredicted RBP21.73■■□□□ 1.07
CCT4-204ENST00000544079 TDRD7Q8NHU6 1098 aaKnown RBP21.73■■□□□ 1.07
CCT4-204ENST00000544079 KIF1BPQ96EK5 621 aa21.73■■□□□ 1.07
CCT4-204ENST00000544079 ELP1O95163 1332 aa21.72■■□□□ 1.07
CCT4-204ENST00000544079 TYRO3Q06418 890 aa21.72■■□□□ 1.07
CCT4-204ENST00000544079 VGLL3A8MV65 326 aa21.71■■□□□ 1.07
CCT4-204ENST00000544079 CAVIN2O95810 425 aa21.71■■□□□ 1.07
CCT4-204ENST00000544079 NUP62CLQ9H1M0 184 aa21.71■■□□□ 1.07
CCT4-204ENST00000544079 RBM6P78332 1123 aaKnown RBP21.71■■□□□ 1.07
CCT4-204ENST00000544079 LRRCC1Q9C099 1032 aa21.71■■□□□ 1.07
CCT4-204ENST00000544079 IL13P35225 146 aa21.7■■□□□ 1.06
CCT4-204ENST00000544079 LRMPQ12912 555 aa21.7■■□□□ 1.06
CCT4-204ENST00000544079 KCND1Q9NSA2 647 aa21.7■■□□□ 1.06
CCT4-204ENST00000544079 MAP2P11137 1827 aaKnown RBP21.7■■□□□ 1.06
CCT4-204ENST00000544079 CYP2C19P33261 490 aa21.69■■□□□ 1.06
CCT4-204ENST00000544079 RBM43Q6ZSC3 357 aaKnown RBP21.69■■□□□ 1.06
CCT4-204ENST00000544079 DRC7Q8IY82 874 aa21.69■■□□□ 1.06
CCT4-204ENST00000544079 RTF1Q92541 710 aaKnown RBP21.69■■□□□ 1.06
CCT4-204ENST00000544079 MTMR6Q9Y217 621 aa21.69■■□□□ 1.06
CCT4-204ENST00000544079 PTPRMP28827 1452 aa21.69■■□□□ 1.06
CCT4-204ENST00000544079 HMOX1P09601 288 aa21.69■■□□□ 1.06
CCT4-204ENST00000544079 NAA30Q147X3 362 aaPredicted RBP21.69■■□□□ 1.06
CCT4-204ENST00000544079 NYAP1Q6ZVC0 841 aa21.69■■□□□ 1.06
CCT4-204ENST00000544079 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.69■■□□□ 1.06
CCT4-204ENST00000544079 RAD50Q92878 1312 aa21.68■■□□□ 1.06
CCT4-204ENST00000544079 KIF2AO00139 706 aaPredicted RBP21.68■■□□□ 1.06
CCT4-204ENST00000544079 CCT4P50991 539 aaKnown RBP21.68■■□□□ 1.06
CCT4-204ENST00000544079 CBX8Q9HC52 389 aa21.68■■□□□ 1.06
CCT4-204ENST00000544079 HECW2Q9P2P5 1572 aa21.68■■□□□ 1.06
CCT4-204ENST00000544079 DNM1Q05193 864 aaKnown RBP21.68■■□□□ 1.06
CCT4-204ENST00000544079 BMS1Q14692 1282 aaKnown RBP21.68■■□□□ 1.06
CCT4-204ENST00000544079 TAF7LQ5H9L4 462 aa21.68■■□□□ 1.06
CCT4-204ENST00000544079 YTHDC2Q9H6S0 1430 aaKnown RBP21.68■■□□□ 1.06
CCT4-204ENST00000544079 TRIM5Q9C035 493 aa21.67■■□□□ 1.06
CCT4-204ENST00000544079 KIDINS220Q9ULH0 1771 aa21.67■■□□□ 1.06
CCT4-204ENST00000544079 CAPN2P17655 700 aa21.67■■□□□ 1.06
CCT4-204ENST00000544079 KRT24Q2M2I5 525 aa21.67■■□□□ 1.06
CCT4-204ENST00000544079 LUZP1Q86V48 1076 aa21.67■■□□□ 1.06
CCT4-204ENST00000544079 ZSCAN31Q96LW9 406 aaPredicted RBP21.67■■□□□ 1.06
CCT4-204ENST00000544079 ZNF215Q9UL58 517 aaPredicted RBP21.67■■□□□ 1.06
CCT4-204ENST00000544079 TRIM6-TRIM34B2RNG4 842 aa21.66■■□□□ 1.06
CCT4-204ENST00000544079 AK2P54819 239 aa21.66■■□□□ 1.06
CCT4-204ENST00000544079 FBXO38Q6PIJ6 1188 aa21.66■■□□□ 1.06
CCT4-204ENST00000544079 RUFY3Q7L099 469 aa21.66■■□□□ 1.06
CCT4-204ENST00000544079 CACTINQ8WUQ7 758 aaKnown RBP21.66■■□□□ 1.06
CCT4-204ENST00000544079 RILPL2Q969X0 211 aa21.66■■□□□ 1.06
CCT4-204ENST00000544079 DDX19AQ9NUU7 478 aaKnown RBP21.66■■□□□ 1.06
CCT4-204ENST00000544079 SH2B1Q9NRF2 756 aaPredicted RBP21.66■■□□□ 1.06
CCT4-204ENST00000544079 SNX14Q9Y5W7 946 aa21.66■■□□□ 1.06
CCT4-204ENST00000544079 ATP7BP35670 1465 aa21.65■■□□□ 1.06
CCT4-204ENST00000544079 PREX1Q8TCU6 1659 aa21.65■■□□□ 1.06
CCT4-204ENST00000544079 SLU7O95391 586 aaKnown RBP21.65■■□□□ 1.06
CCT4-204ENST00000544079 GNAI2P04899 355 aa21.65■■□□□ 1.06
CCT4-204ENST00000544079 PTPN14Q15678 1187 aa21.65■■□□□ 1.06
CCT4-204ENST00000544079 SARM1Q6SZW1 724 aa21.65■■□□□ 1.06
CCT4-204ENST00000544079 NOL10Q9BSC4 688 aaKnown RBP21.65■■□□□ 1.06
CCT4-204ENST00000544079 NRBP1Q9UHY1 535 aa21.65■■□□□ 1.06
CCT4-204ENST00000544079 AATKQ6ZMQ8 1374 aa21.64■■□□□ 1.06
CCT4-204ENST00000544079 CLIP2Q9UDT6 1046 aa21.64■■□□□ 1.06
CCT4-204ENST00000544079 CHL1O00533 1208 aa21.64■■□□□ 1.05
CCT4-204ENST00000544079 KRT85P78386 507 aa21.64■■□□□ 1.05
CCT4-204ENST00000544079 ANO6Q4KMQ2 910 aa21.64■■□□□ 1.05
CCT4-204ENST00000544079 ARHGEF10O15013 1369 aa21.63■■□□□ 1.05
CCT4-204ENST00000544079 HTATSF1O43719 755 aaKnown RBP21.63■■□□□ 1.05
CCT4-204ENST00000544079 ADGRL3Q9HAR2 1447 aa21.63■■□□□ 1.05
CCT4-204ENST00000544079 LRRC8AQ8IWT6 810 aa21.63■■□□□ 1.05
CCT4-204ENST00000544079 TNMDQ9H2S6 317 aa21.63■■□□□ 1.05
CCT4-204ENST00000544079 H2AFXP16104 143 aaPredicted RBP21.62■■□□□ 1.05
CCT4-204ENST00000544079 GJB2P29033 226 aa21.62■■□□□ 1.05
CCT4-204ENST00000544079 MRFAP1L1Q96HT8 127 aa21.62■■□□□ 1.05
CCT4-204ENST00000544079 SGSM2O43147 1006 aa21.62■■□□□ 1.05
CCT4-204ENST00000544079 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
CCT4-204ENST00000544079 CLSTN2Q9H4D0 955 aa21.61■■□□□ 1.05
CCT4-204ENST00000544079 TTC6Q86TZ1 520 aa21.6■■□□□ 1.05
CCT4-204ENST00000544079 EXOC6BQ9Y2D4 811 aa21.6■■□□□ 1.05
CCT4-204ENST00000544079 ERICH4A6NGS2 130 aa21.6■■□□□ 1.05
CCT4-204ENST00000544079 ELF2Q15723 593 aa21.6■■□□□ 1.05
CCT4-204ENST00000544079 VPS53Q5VIR6 699 aa21.6■■□□□ 1.05
CCT4-204ENST00000544079 TSHZ3Q63HK5 1081 aa21.6■■□□□ 1.05
CCT4-204ENST00000544079 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.6■■□□□ 1.05
CCT4-204ENST00000544079 ERBB3P21860 1342 aa21.6■■□□□ 1.05
CCT4-204ENST00000544079 CHD2O14647 1828 aaKnown RBP21.6■■□□□ 1.05
CCT4-204ENST00000544079 TUBB4AP04350 444 aa21.59■■□□□ 1.05
CCT4-204ENST00000544079 ATP8B2P98198 1209 aa21.59■■□□□ 1.05
CCT4-204ENST00000544079 ZNF592Q92610 1267 aa21.59■■□□□ 1.05
CCT4-204ENST00000544079 SCAND2PQ9GZW5 306 aaPredicted RBP21.59■■□□□ 1.05
CCT4-204ENST00000544079 LSG1Q9H089 658 aaKnown RBP21.59■■□□□ 1.05
CCT4-204ENST00000544079 ZNF446Q9NWS9 450 aa21.59■■□□□ 1.05
CCT4-204ENST00000544079 HYPKQ9NX55 129 aa21.59■■□□□ 1.05
CCT4-204ENST00000544079 NPHP3Q7Z494 1330 aa21.59■■□□□ 1.05
CCT4-204ENST00000544079 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms