RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 DDX10Q13206 875 aaKnown RBP24.94■■□□□ 1.58
TDG-208ENST00000544060 FMNL2Q96PY5 1086 aa24.94■■□□□ 1.58
TDG-208ENST00000544060 TEX13AQ9BXU3 409 aaPredicted RBP24.94■■□□□ 1.58
TDG-208ENST00000544060 CANXP27824 592 aaKnown RBP24.93■■□□□ 1.58
TDG-208ENST00000544060 RALBP1Q15311 655 aa24.93■■□□□ 1.58
TDG-208ENST00000544060 USPL1Q5W0Q7 1092 aa24.93■■□□□ 1.58
TDG-208ENST00000544060 MCM10Q7L590 875 aa24.93■■□□□ 1.58
TDG-208ENST00000544060 PXDNLA1KZ92 1463 aa24.92■■□□□ 1.58
TDG-208ENST00000544060 HTATSF1O43719 755 aaKnown RBP24.91■■□□□ 1.58
TDG-208ENST00000544060 TGFB2P61812 414 aa24.91■■□□□ 1.58
TDG-208ENST00000544060 NARFQ9UHQ1 456 aa24.91■■□□□ 1.58
TDG-208ENST00000544060 N4BP2Q86UW6 1770 aaPredicted RBP24.9■■□□□ 1.58
TDG-208ENST00000544060 KIAA1551Q9HCM1 1747 aa24.89■■□□□ 1.58
TDG-208ENST00000544060 DDR1Q08345 913 aa24.89■■□□□ 1.58
TDG-208ENST00000544060 DCTN1Q14203 1278 aa24.89■■□□□ 1.58
TDG-208ENST00000544060 PNNQ9H307 717 aaKnown RBP24.89■■□□□ 1.58
TDG-208ENST00000544060 KCNQ3O43525 872 aa24.88■■□□□ 1.57
TDG-208ENST00000544060 MAPK8IP3Q9UPT6 1336 aa24.87■■□□□ 1.57
TDG-208ENST00000544060 A0A087WZG4 1122 aa24.87■■□□□ 1.57
TDG-208ENST00000544060 A0A0G2JLW4 131 aa24.87■■□□□ 1.57
TDG-208ENST00000544060 ZNF330Q9Y3S2 320 aaPredicted RBP24.87■■□□□ 1.57
TDG-208ENST00000544060 TM4SF1P30408 202 aa24.86■■□□□ 1.57
TDG-208ENST00000544060 NPM2Q86SE8 214 aaKnown RBP24.86■■□□□ 1.57
TDG-208ENST00000544060 DLG5Q8TDM6 1919 aa24.85■■□□□ 1.57
TDG-208ENST00000544060 POLRMTO00411 1230 aaKnown RBP24.85■■□□□ 1.57
TDG-208ENST00000544060 DPEP1P16444 411 aa24.85■■□□□ 1.57
TDG-208ENST00000544060 EIF5P55010 431 aaKnown RBP24.85■■□□□ 1.57
TDG-208ENST00000544060 PLEKHF1Q96S99 279 aa24.84■■□□□ 1.57
TDG-208ENST00000544060 BCS1LQ9Y276 419 aa24.84■■□□□ 1.57
TDG-208ENST00000544060 IL6STP40189 918 aaPredicted RBP24.83■■□□□ 1.57
TDG-208ENST00000544060 NFIXQ14938 502 aa24.83■■□□□ 1.57
TDG-208ENST00000544060 NFE2L2Q16236 605 aa24.83■■□□□ 1.57
TDG-208ENST00000544060 MYBBP1AQ9BQG0 1328 aaKnown RBP24.83■■□□□ 1.56
TDG-208ENST00000544060 TAF7Q15545 349 aaPredicted RBP24.82■■□□□ 1.56
TDG-208ENST00000544060 A1BGP04217 495 aa24.81■■□□□ 1.56
TDG-208ENST00000544060 SNRPA1P09661 255 aaKnown RBP24.81■■□□□ 1.56
TDG-208ENST00000544060 BCL2L12Q9HB09 334 aa24.81■■□□□ 1.56
TDG-208ENST00000544060 SCN7AQ01118 1682 aa24.81■■□□□ 1.56
TDG-208ENST00000544060 AFDNP55196 1824 aaKnown RBP24.79■■□□□ 1.56
TDG-208ENST00000544060 BRCA1P38398 1863 aaKnown RBP24.79■■□□□ 1.56
TDG-208ENST00000544060 BICDL1Q6ZP65 573 aa24.79■■□□□ 1.56
TDG-208ENST00000544060 TBC1D2BQ9UPU7 963 aa24.79■■□□□ 1.56
TDG-208ENST00000544060 PRAMEF22A3QJZ6 481 aa24.78■■□□□ 1.56
TDG-208ENST00000544060 SERPINB2P05120 415 aa24.78■■□□□ 1.56
TDG-208ENST00000544060 PNISRQ8TF01 805 aaKnown RBP24.78■■□□□ 1.56
TDG-208ENST00000544060 MIS18AQ9NYP9 233 aa24.78■■□□□ 1.56
TDG-208ENST00000544060 PIM2Q9P1W9 311 aa24.78■■□□□ 1.56
TDG-208ENST00000544060 USP16Q9Y5T5 823 aa24.78■■□□□ 1.56
TDG-208ENST00000544060 NRXN2Q9P2S2 1712 aa24.77■■□□□ 1.56
TDG-208ENST00000544060 ATP10DQ9P241 1426 aa24.77■■□□□ 1.56
TDG-208ENST00000544060 KCNA3P22001 575 aa24.76■■□□□ 1.55
TDG-208ENST00000544060 CHRNA5P30532 468 aa24.76■■□□□ 1.55
TDG-208ENST00000544060 KDM3BQ7LBC6 1761 aa24.75■■□□□ 1.55
TDG-208ENST00000544060 PIP4K2AP48426 406 aaPredicted RBP24.75■■□□□ 1.55
TDG-208ENST00000544060 DALRD3Q5D0E6 543 aaKnown RBP24.75■■□□□ 1.55
TDG-208ENST00000544060 ARHGAP27Q6ZUM4 889 aa24.75■■□□□ 1.55
TDG-208ENST00000544060 THUMPD2Q9BTF0 503 aaKnown RBP24.75■■□□□ 1.55
TDG-208ENST00000544060 GIGYF1O75420 1035 aaPredicted RBP24.74■■□□□ 1.55
TDG-208ENST00000544060 TBC1D9BQ66K14 1250 aa24.74■■□□□ 1.55
TDG-208ENST00000544060 DZIP3Q86Y13 1208 aaKnown RBP24.74■■□□□ 1.55
TDG-208ENST00000544060 LAMB4A4D0S4 1761 aa24.74■■□□□ 1.55
TDG-208ENST00000544060 ARFGEF1Q9Y6D6 1849 aa24.73■■□□□ 1.55
TDG-208ENST00000544060 BCORQ6W2J9 1755 aa24.73■■□□□ 1.55
TDG-208ENST00000544060 ADCY9O60503 1353 aa24.73■■□□□ 1.55
TDG-208ENST00000544060 CARMIL3Q8ND23 1372 aa24.72■■□□□ 1.55
TDG-208ENST00000544060 CAMTA2O94983 1202 aa24.72■■□□□ 1.55
TDG-208ENST00000544060 ZEB1P37275 1124 aaPredicted RBP24.72■■□□□ 1.55
TDG-208ENST00000544060 WDR43Q15061 677 aaKnown RBP eCLIP24.72■■□□□ 1.55
TDG-208ENST00000544060 RIPK4P57078 832 aa24.71■■□□□ 1.55
TDG-208ENST00000544060 NPHP1O15259 732 aa24.7■■□□□ 1.54
TDG-208ENST00000544060 LMOD3Q0VAK6 560 aa24.7■■□□□ 1.54
TDG-208ENST00000544060 SETDB2Q96T68 719 aa24.7■■□□□ 1.54
TDG-208ENST00000544060 ZNF526Q8TF50 670 aaPredicted RBP24.69■■□□□ 1.54
TDG-208ENST00000544060 GPBP1L1Q9HC44 474 aaPredicted RBP24.69■■□□□ 1.54
TDG-208ENST00000544060 CCDC146Q8IYE0 955 aa24.68■■□□□ 1.54
TDG-208ENST00000544060 PRKRIP1Q9H875 184 aaPredicted RBP24.68■■□□□ 1.54
TDG-208ENST00000544060 ZNF652Q9Y2D9 606 aa24.68■■□□□ 1.54
TDG-208ENST00000544060 DLEC1Q9Y238 1755 aa24.67■■□□□ 1.54
TDG-208ENST00000544060 NBPF26B4DH59 902 aa24.67■■□□□ 1.54
TDG-208ENST00000544060 H0YIN7 160 aa24.67■■□□□ 1.54
TDG-208ENST00000544060 TMPOP42166 694 aaKnown RBP24.67■■□□□ 1.54
TDG-208ENST00000544060 EIF4A1P60842 406 aaKnown RBP24.67■■□□□ 1.54
TDG-208ENST00000544060 NBPF10Q6P3W6 841 aaKnown RBP24.67■■□□□ 1.54
TDG-208ENST00000544060 C2CD5Q86YS7 1000 aa24.67■■□□□ 1.54
TDG-208ENST00000544060 NBPF15Q8N660 670 aa24.67■■□□□ 1.54
TDG-208ENST00000544060 C1QTNF8P60827 252 aa24.66■■□□□ 1.54
TDG-208ENST00000544060 CNBD1Q8NA66 436 aa24.66■■□□□ 1.54
TDG-208ENST00000544060 TSPYL4Q9UJ04 414 aa24.66■■□□□ 1.54
TDG-208ENST00000544060 PRR5LQ6MZQ0 368 aa24.65■■□□□ 1.54
TDG-208ENST00000544060 CLEC4GQ6UXB4 293 aa24.65■■□□□ 1.54
TDG-208ENST00000544060 RRP7AQ9Y3A4 280 aaKnown RBP24.65■■□□□ 1.54
TDG-208ENST00000544060 PDE6BP35913 854 aa24.64■■□□□ 1.54
TDG-208ENST00000544060 NEUROD2Q15784 382 aa24.64■■□□□ 1.54
TDG-208ENST00000544060 RUNDC1Q96C34 613 aa24.64■■□□□ 1.54
TDG-208ENST00000544060 ST5P78524 1137 aa24.63■■□□□ 1.53
TDG-208ENST00000544060 CCDC24Q8N4L8 307 aa24.63■■□□□ 1.53
TDG-208ENST00000544060 TTLL6Q8N841 843 aa24.63■■□□□ 1.53
TDG-208ENST00000544060 BRIP1Q9BX63 1249 aa24.63■■□□□ 1.53
TDG-208ENST00000544060 PDZRN3Q9UPQ7 1066 aa24.63■■□□□ 1.53
TDG-208ENST00000544060 ANKRD31Q8N7Z5 1873 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms